Basic Information

Gene Symbol
Bgb
Assembly
GCA_900474315.1
Location
UXGD01001568.1:5603-16682[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-83 5.5e-79 264.3 0.2 1 163 36 195 36 199 0.96

Sequence Information

Coding Sequence
ATGATGATGCACACGATGGCCGATCATACGGCCGGGGGTCTAGGTGTGCTACCCTTTGACGGGATGGGGATATACGAGCAGCCGAGGCCCAGGTTCGTTTTCAAGATGCCCAGGGTCGTGCCAGATCAGAAGAGCAAGTTCGAGAATGACGAGCTGTTTAGGAGGCTTAGCCGTGAGAGTGAGGTAAAGTACACGGGCTTCAGGGACCGGCCAATCGAGGAACGCCAAGTCCGTTTCCACAACGGTTGCCGCGAGGGCCACACGGAGATAGCGTTCGCCGCTACGGGTACAAACCTCCAGCTCGTCTTCGGCGTCAGCTCCGGCAACTTTGCTGGCGACCCGCGTGAATGCGACTTCGACAAGGAGCATGGCAAGGTGCACCTAAAATCCCACCTGATTATGAACGGCGTGTGCGTGACGTGGCGCGGCTGGATCGACCTGGAGCGTCTCGACGGTGTTGGCTGCCTCGAATTCGACGAAGAGCGCGCCGCTGAAGAAGACGCACTACTGCGCGACCAGATCGAGCGCTACAACCGTCGCGTCCAGGAAATCGAGGACAAACATCGAGCTTACCGTTCGGGTGCCGCAGCAGCTGTGCAACCGATTCACCTGAAtcaccatcatcaccatcatcacgGCCATCACGCGCATTTGGGTCACGTGCCCGACGCCAGCGCCACCGTCGATCCGCACCTAAACCATCGCCAGGATCCCGAGATGGAGGTGCGGCTGCGCGCTtattaa
Protein Sequence
MMMHTMADHTAGGLGVLPFDGMGIYEQPRPRFVFKMPRVVPDQKSKFENDELFRRLSRESEVKYTGFRDRPIEERQVRFHNGCREGHTEIAFAATGTNLQLVFGVSSGNFAGDPRECDFDKEHGKVHLKSHLIMNGVCVTWRGWIDLERLDGVGCLEFDEERAAEEDALLRDQIERYNRRVQEIEDKHRAYRSGAAAAVQPIHLNHHHHHHHGHHAHLGHVPDASATVDPHLNHRQDPEMEVRLRAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394046;
90% Identity
iTF_01109872;
80% Identity
-