Olab008045.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- Bgb_1
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000036.1:20382619-20390925[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-84 2.6e-79 265.4 0.2 1 161 38 195 38 200 0.97
Sequence Information
- Coding Sequence
- ATGATGATGCATACGATGAGTGACCATACCGCCGGAGGGCTGGGAGTCGGAGTCCTGCCCTTCGACGGTATGGGCATCTACGAGCAGCCCCGTCCTCGGCTGGTGTTCAAAATGCCGAGGGTCGTTCCGGACCAGAAGAGCAAGTTCGAGAACGATGAGCTGTTCAGGCGACTCAGCCGGGAAAGCGAGGTGAAGTACACCGGCTACCGAGATCGGCCGATCGAGGAGCGTCAGATGCGTTTTCACAACGGATGCCGCGAGGGGCACACGGAGATCGCGTTCGCCGCGACTGGCACCAATCTCCAGCTCGTCTTCGGCGTCAGTTCTGGAAACTTCGCCGGCGATCCTCGGGAGTGTGACTTCGACAAGGAACACGGAAAGGTGCACATAAAATCCCACCTGATAATGAACGGCGTCTGCGTGACCTGGCGCGGCTGGATCGACCTGGAACGGCTCGACGGGGTCGGCTGCCTTGAGTACGACGAGGAGCGCGCGGCCGAGGAGGACGCCCTCCTGCGCGACCAGATCGAGCGGTACAACCGGCGCGTCCAGGAGATCGAGGACAAGCACCGGGCGTACCGGGCCGGCGGCGTGCAGCCGCCCCACCTgaaccaccaccaccaccatcaTGGTCACCACGCGCACCTCGGCGTGCCGGGCGCGGGCGCGGCCGTCGATCCCCACCTGAATCACCGGCAGGACCCCGAGATGGAAGTCCGATTACGTGCCTATTAG
- Protein Sequence
- MMMHTMSDHTAGGLGVGVLPFDGMGIYEQPRPRLVFKMPRVVPDQKSKFENDELFRRLSRESEVKYTGYRDRPIEERQMRFHNGCREGHTEIAFAATGTNLQLVFGVSSGNFAGDPRECDFDKEHGKVHIKSHLIMNGVCVTWRGWIDLERLDGVGCLEYDEERAAEEDALLRDQIERYNRRVQEIEDKHRAYRAGGVQPPHLNHHHHHHGHHAHLGVPGAGAAVDPHLNHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394046;
- 90% Identity
- iTF_01113185; iTF_01112344; iTF_01110684; iTF_01111520; iTF_00712609; iTF_00713456; iTF_00714138; iTF_00689923; iTF_01035204; iTF_01190084; iTF_00286096; iTF_01036787; iTF_00738836; iTF_00143639; iTF_00692667; iTF_01035967; iTF_01274240; iTF_00079576; iTF_00845059; iTF_00304851; iTF_00708341; iTF_01523799; iTF_00968556; iTF_00969335; iTF_01465943; iTF_01464790; iTF_00734328;
- 80% Identity
- iTF_01112344; iTF_01110684; iTF_01111520;