Tcin007683.1
Basic Information
- Insect
- Tolmerus cingulatus
- Gene Symbol
- sip1
- Assembly
- GCA_959613345.1
- Location
- OY390707.1:25391218-25394499[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-93 1.1e-88 298.8 15.7 4 275 399 662 396 662 0.98 2 2 0.13 3.2e+03 -1.2 0.1 244 269 676 701 665 707 0.69
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAAAGATTTGAAATAACAGATTATGATTTGGAAAACGAATTTAATCCAAATCGCCCGCGAAGGCGCCAAACGAAGCACCAACAGATTTATGGCATTTGGGCTGATGATAGTGAAAATGAGGAGGAACAGGAGCTTACCTCGCGAAGAAGAGGTGGCAGGAAGGCCAAGGACTATTCGGCTCCAGTTAGTTTTGTCGCCGGAGGAATCCAACAGTCCGGCAAAAAGGACGATGACGAGGACGACGATTTGGAAAATGATGAATCACAAATTACTGATGAAGAGGACGAACGACCTTCCTTCGGTCGGAAAGAAGTCGAGAGGGGTTCATCATCAGAATCCGAATCAGAGCCAGAAGTTCGTCCACAGCCTCCATCCAGGAATTCTGGATTCGGGAGTGGTCCCAGTCGACCACCCCCCACGAATGCTCGTCTTGGAAAATGGGAAGCCCATACAAAAGGAATTGGTGcaaaacttttgcttcaaaTGGGTTACGAGCCGGGAAAGGGCTTGGGTAAAGATCTCCAAGGTATCGCTCAACCTGTGGAAGCTCACATGAGAAAGGGTCGGGGAGCAATTGGGGCATATGGTCCTGAAAAAGCTGCTACTATAGCTAATCAAAagttacaattaaaaattgacgAGGATGAGAGGGAGACGAAGGAGTTCAAGGATAAAATGAACATGTGGAAAAAAGATGGGAAGCCGGAAAAAGGTAAGAAAAATCGGTATTATTACAGGAGTGTGGAGGAAGTTATCGAGAAAGGGAAGAAATCGAGTTTTTTATCTGATAAGTACAGcAATAAACTCAGCAATGTTACAGTCATAGACATGACAGGTCCAGAAAAAAGAGTTCTAAGTGGCTATCATGCTCTAGGACAGGCGAAAGTTCTCGACGAGGATCTTTACGAGCATAGACAGGCTAAAAAATGCACTAACTTCACCCTTCCTGAACTTATGCACAATTTGAATCTAATCGTGGATATGTGTGAACAAGAAATCATCTCAATTGATAAAACAGAACGGGAAGctaatgaaaaacaaaagcaactTCAGCATGAAAAGGAAAACCTTGAGAAGATTGTTAAACTTGAAAACGATCACATATATACTTTAGAACAAGCTCTAGATTTGGTAGAAAATCTGACGGACCCTGAAGACCCTTTAACGCTTTTTAAggcagaaaaaatatttgtcagATTACAAACCGATTTTGCTGCAGAATATAAAGAATTTGGTTTGGGGGATTTGGCGGCTGGGGTAATAGCACCGCTGGTTAATCAGGAATTAAATAACTGGAAACCCCTAGAAGAGCCCACTAAACACGTAGACGTTGTAAAAAAATGGCGAACTATTTTAGGAATGCATCAGTCGGAAACAAGAAACGTTTTTGATCCGTACTCCTCGTTAGTTTGGGCTGGAGTTATTCCCAATTTTCGTCAAGCAGCTTCTACCTGGAATCCAAAACAGCATCAGGCAATGGCTGCTTTGCTTGAGGCCTGGGCACCACTTTTTCCGACGTGGATTCTTGATAATATTTTGGAACAAGTTATTTTACCCAGGCTCTCATCAGCCGTTCAAGATTGGGATCCACTTACAGATACTGTTCCAATACATGTGTGGATATTACCGTGGAGCGCAATTTTGGGTCATAAAATGGAGgAATTCGTGTATCCCATGATTCGCGATAAGCTGGGTAATGCGCTGCAGGCATGGGTTCCCCAGGACCGATCAGCTAGACTTATGCTCATTCCTTGGAAATGCGCTTTTTCTGACGGTGAAATGCAGAGCTTCTTGATGAAGCATATTATCCCTAAACTTCAAATGACTCTtgctgaaataattataaatccTCTTCAACAAGATTTAGAACTGTGGAACCAAGTTTGGGAATGGCACGAACTAATTTCTCCCTTATTTATGGCACAACTCCTCGACAAATACTTCTTCCCGAAGTGGATGCAAACTTTGGTTATTTGGTTGAACCAACAACCCAACCTAGAACAAATCTCACGGTGGTACACCGGATGGAAGGGACTAATTACAGATGAGGTTTTACAACAACCCAACATTAAGGAGCATTTCCGAAGAGCCTTGGAGCTTATGCATCGGGCGGTAGCCACTCCTCAAAATGCCGAAGCTCCTCCGGttcaacagcagcagcagcagcaacagcctCAGCCACAACCTCAAGTCCAGCCACAATCGCAGCAAGTTTCTCATCCACCTGCTCTGATGGATCTCCAAATTCCACCACCACCTCAGATAGAATTCAAGGAGTTGGTCTCACAGAGATGTGCCGAACGGGGGATTATCTTTGCTCCACTACCTGGTCGAAGGGAATTCGGGAAGCAGGTGTACAGAGTGGGTAAACTATTTTGCTACATCGATCGGGCTGTCCTTATGGTCAGCGAtggaagtttttcaaattggaCGCCGACTTCCTTGGGATTGCTTTTAGAGAGGGctttataa
- Protein Sequence
- MSDNEYERFEITDYDLENEFNPNRPRRRQTKHQQIYGIWADDSENEEEQELTSRRRGGRKAKDYSAPVSFVAGGIQQSGKKDDDEDDDLENDESQITDEEDERPSFGRKEVERGSSSESESEPEVRPQPPSRNSGFGSGPSRPPPTNARLGKWEAHTKGIGAKLLLQMGYEPGKGLGKDLQGIAQPVEAHMRKGRGAIGAYGPEKAATIANQKLQLKIDEDERETKEFKDKMNMWKKDGKPEKGKKNRYYYRSVEEVIEKGKKSSFLSDKYSNKLSNVTVIDMTGPEKRVLSGYHALGQAKVLDEDLYEHRQAKKCTNFTLPELMHNLNLIVDMCEQEIISIDKTEREANEKQKQLQHEKENLEKIVKLENDHIYTLEQALDLVENLTDPEDPLTLFKAEKIFVRLQTDFAAEYKEFGLGDLAAGVIAPLVNQELNNWKPLEEPTKHVDVVKKWRTILGMHQSETRNVFDPYSSLVWAGVIPNFRQAASTWNPKQHQAMAALLEAWAPLFPTWILDNILEQVILPRLSSAVQDWDPLTDTVPIHVWILPWSAILGHKMEEFVYPMIRDKLGNALQAWVPQDRSARLMLIPWKCAFSDGEMQSFLMKHIIPKLQMTLAEIIINPLQQDLELWNQVWEWHELISPLFMAQLLDKYFFPKWMQTLVIWLNQQPNLEQISRWYTGWKGLITDEVLQQPNIKEHFRRALELMHRAVATPQNAEAPPVQQQQQQQQPQPQPQVQPQSQQVSHPPALMDLQIPPPPQIEFKELVSQRCAERGIIFAPLPGRREFGKQVYRVGKLFCYIDRAVLMVSDGSFSNWTPTSLGLLLERAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256405;
- 90% Identity
- iTF_00628364;
- 80% Identity
- -