Tlat003908.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963932295.1
- Location
- OZ010736.1:38335968-38341136[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-17 2.8e-14 53.6 0.0 1 45 287 332 287 332 0.97 2 2 2.8e-18 3.2e-15 56.6 0.0 1 43 702 745 702 747 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGAAATGGAAACTTTATCAAGATTTAATTGCAAAATCCAATCAAAACAGTATAAATTCTGCGAGCGCATTTCAACAAGAAACTTCCGTAGCTGGTGACGAATACGGCGAGggggaagaaaataaaataacttccgTGGAAACCGTGGCTAGTAAAGATAATAAAGACAATAGTGAATTAGTCGAAAATCAAACATCAAACATTCCGATTGATTGGAAACCGCAAGATAAGTGTTATTTTTGTGTGGATGGTAAATTATTAACCGTGAACGAGAACGGAGATTTAGTGGCCGAGTCTGGTTACTCGGGTCAACCCGAGACAGACATCGCCCATAGAcaaaCACCAATTGATTCAGATAGTGAGTCCAGTGGTAGCTATTCTGGGTCAGATTTACGACAGTCGAGTAATAACTCGCTCGCCGCAGCTGCACAATCAGCAGCTGTTAGTAGAACATtagaaaatttacttaaagGCACAATACCAAATAATATGACTTCGCTTGAATCAATGGCTGCCACTATACAAGCAGTTGCTGCACTACAAGGATTACATTCCGTTCAAGGAATTAATTCATTGTATCCAGGTTTATTTTATCAAGCACTTGCCCAGCCACAGCCCGGATCCGTTAATCATGGTGGGCGAAATGAAGATCCTATTTTATCGATGAATGATTCGGTAGTAAGGCATCATGCGGCCGGGTCAAGTGAACTAATCACAAATGCGGAACAACCACTCGATCTAAGTGCCAAACCATGTGCATCTACACTACCTGTTAACGAtacacgtacaaatttaatggGTGTGAGAGCTAAACCGCGAGTTTCAACAGTCCCTGGACGTAGAACGTACACAGAAGATGAATTGCAGCGTGCCTTACAAGATATAATTAGTGGTAAGCTGGGTACAAGGCGTGCTGCTGTTTTATACGGAATTCCACGATCAACATTGCGGAATAAAGTATACAAGCTGTCAATGGAACAAAAGCGTGAGGCTCTAATACAACCCCCACCATCGGTAGTTTTACCAGACGACCTTGAAGAAAAAGATGCTTCAGACGCCGACGATGATAAAGATATTGATAAAGACTTATCTAAAAGTTCAAATACATTAGCATCATCACATCTACCAACGCAAAATGATCATCTACACAAGGATAATGATCATAACAGGCCGATTGTAGGCACGCCGCCTACATTACATTCTCAACAACATGCATCGCCTCAATCTCAGACTCCCCCTATTATGCACCAAGATTTATACGCGACCAATGTTATGCTTCAAAGTCTACTTTTTCAGGGTGGACTTATGTCTCAGAAACCTGAAGAAACAGCCgcattcattcaaaattttgtactACGGcaagaaatgttaaaaaatgcCGTTCGATCACAGCAGGGCAATGAAAATCAAATGAACAATGGTAAACCAGCCACGAGTCCATTAGACGCACGACTATTCCCgatattacaacaaaaaatcaattgtaAATCAGAACCATCTGAACTTGTATCGCCGCACGAGCCGAATGAAAGTGACGAATCAAATGTGATATTAAAAATTCCGTCCTTCAAACCAATAGCAACGGGTGGTGGTGGAAATAATATTCCGGGTACATCACCCGGTACAGCAACGTCCCCCGCAATTAAGTTGAATAAcagtaatcaaaatatatttccacCTCATCATCCAGCACATCATCAACAGCATCACAGTAATAATTTAGCCCATACCCAAAATAGCCCACCGGTGAATTCACCCGGGAATTTACGGCCCGGTATTTCGCCAACACTAAAACGTGAGAATAGTGATTCACAATCACCGCCAGTGacgcaaaaaaatatgttaacctTACATGAGGTGATAGCTAGTAGCATAAGTAAAAGTTTTCAACAACAATCGAGTCATCATCAGTCGAGCGGAGATGGAGATCCTAGCAAAAGGCCTCAAATATCGGTTATAAAAAATCTAGGCGGAACTGATATATCACGATTTGCACACAGTCCAAATATGATGAGTTCGAGTTCATTGCATGCATCACTAACTGGAACTGGTGGTAAAGGGACGAGACCAAAACGTGGTAAATACCGAAATTATGATCGAGATAGCTTAGTGGAAGCGGTTAAAGCAGTTCAGCGAGGTGAAATGTCTGTGCATAGGGCGGGTAGTTATTATGGTGTGCCACACTCGACACTCGAGTATAAAGTTAAGGAAAGACATTTAATGAGGCCGCGAAAACGTGAACCAAAACCACAACCATTAGATGGTGCATCATCGAGTACGGCATCATCGAGCACAAAAGATATAAGTGCGTCAAGTACATTCCGGCCAGTAGATAAATCAAAATCACTTGCACAACAACCAAAGCCATCACTTAAAACACCTCCACCACAATTTTCGTCATCATCACCGAATGGCATGAAAATGACGATGTTCGATCCGGCAATGGCAGCACAGTTACAATACACATCACAATTATTATGGCCACATCCACCGGGTGGATTTAGTGGGTTGCCAATGGATTTTCCGCGCCCTTCGTCTGGTACGCCACAATTTGCAACGAATCCCGAACAATATTTCGCTTCACAGATGATGCAAAAAATTCaggaaaattcatcaaaaatgcAACTAAATAAACAGCCCGGCAATAGTTTATACGACGTGACCAATTCGAATGGATCGTTACTCGATGGTATTATTCGACAGAGCTTAGATCGTGGCAAAAACGATATGCCACACAGTAGTCTACTCGATCAGCTTAGTAAAAGTAATTGTTCGAGTTCCGTTGCAAGTGATgatacaaattcaaataatgGCGGAACAAAACGTTCGGCTGGTTCGCCACTAAATTATTCACACATAGATATAAAACGGGAACGTTCTAGTCCAATAACAACGTCAGAAAGTGATCGTGATACACCAGATTCGGATCATAGTGATGCGACAATGCATACAACAACGACAACATCGGCGATGATAAATAAAGGTgctgtagaaaatttattaagaatacgTGAAGATCTTACATTAAGATCGGGATCAGCTGATGAACAACACCAAACACCACTAAAACGTATGGAAGACCATAATGGTGGCGGTGGTGGCGCTTTAATACCTAATACAACAATAACCAGTCAACAATCTGATATGGATGATGGAacatag
- Protein Sequence
- MGRRKWKLYQDLIAKSNQNSINSASAFQQETSVAGDEYGEGEENKITSVETVASKDNKDNSELVENQTSNIPIDWKPQDKCYFCVDGKLLTVNENGDLVAESGYSGQPETDIAHRQTPIDSDSESSGSYSGSDLRQSSNNSLAAAAQSAAVSRTLENLLKGTIPNNMTSLESMAATIQAVAALQGLHSVQGINSLYPGLFYQALAQPQPGSVNHGGRNEDPILSMNDSVVRHHAAGSSELITNAEQPLDLSAKPCASTLPVNDTRTNLMGVRAKPRVSTVPGRRTYTEDELQRALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKLSMEQKREALIQPPPSVVLPDDLEEKDASDADDDKDIDKDLSKSSNTLASSHLPTQNDHLHKDNDHNRPIVGTPPTLHSQQHASPQSQTPPIMHQDLYATNVMLQSLLFQGGLMSQKPEETAAFIQNFVLRQEMLKNAVRSQQGNENQMNNGKPATSPLDARLFPILQQKINCKSEPSELVSPHEPNESDESNVILKIPSFKPIATGGGGNNIPGTSPGTATSPAIKLNNSNQNIFPPHHPAHHQQHHSNNLAHTQNSPPVNSPGNLRPGISPTLKRENSDSQSPPVTQKNMLTLHEVIASSISKSFQQQSSHHQSSGDGDPSKRPQISVIKNLGGTDISRFAHSPNMMSSSSLHASLTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGASSSTASSSTKDISASSTFRPVDKSKSLAQQPKPSLKTPPPQFSSSSPNGMKMTMFDPAMAAQLQYTSQLLWPHPPGGFSGLPMDFPRPSSGTPQFATNPEQYFASQMMQKIQENSSKMQLNKQPGNSLYDVTNSNGSLLDGIIRQSLDRGKNDMPHSSLLDQLSKSNCSSSVASDDTNSNNGGTKRSAGSPLNYSHIDIKRERSSPITTSESDRDTPDSDHSDATMHTTTTTSAMINKGAVENLLRIREDLTLRSGSADEQHQTPLKRMEDHNGGGGGALIPNTTITSQQSDMDDGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455566; iTF_01459372; iTF_01053072; iTF_01054219; iTF_01458251; iTF_01454768; iTF_01051834;
- 90% Identity
- -
- 80% Identity
- -