Thel086047.1
Basic Information
- Insect
- Tipula helvola
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963556165.1
- Location
- OY744482.1:390653025-390664623[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 1.1e-13 53.5 0.0 1 45 344 389 344 389 0.97 2 2 1.2e-17 1.2e-14 56.5 0.0 1 43 776 819 776 821 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGAAATGGAAACTTTATCAAGAATTAATTGCAAGATCCAATCAAAACAGTATAAATTCTGCGAGCATATTTCATCAAGAAACTTCCGTAGaaaatcaagaaaatttagaattgcAAGACGACGAAGTAACAAAGTATATAGTGAAAATAGAGCCAAAACACttagaaaatatcaaaaattctaGCATTAAGAATAACAATAGTATACATTCGATAGAAGACGGTGAGGAACAAGACGACGACGAGGAGGTGGGCGAGGTGGAAGAagttgaaaatcaaaaaaattccacaaaacGCCACAGTGATAAAAAAGAGGAGGAAGACAATAGTGAACTAGTTGAAAGTGAAACACCAAACATTCCAATTGATTGGAAGCCGCAAGATAAGTGTTATTTTTGTGTGGATGGTAAATTATTAACCGTGAACGAGAACGGAGATTTAGTGGCCGAGTCTGGTTACTCGGGTCAAACCGATACAGACGTCGCCCTTAGAgaAACACCTGTTGAATCAGATAGTGAGTCCAGTGGTAGCTATTCTGGATCAGATTTACGCCAGTCTGCAAATATATCGGGTAACGCGGCCGCCGCAGCTGCACAAACAGCAGCCGTTagtaaaacattggaaaatttacTTAAAGGCACAATACCAAATAATATGACTTCGCTTGAATCAATGGCGGCCACAATACAAGCAGTAGCCGCATTACAAGGATTACATTCCGTTCAAGGAATTAATTCATTGTATCCAGGTTTGTTTTATCAAGCACTTGCCCAACCACAAGCCGGAACTGGCAATCATAGTGGCCGAGATGACGATTCTGTTTTATCGATGAACGAGTCGGCGATAAGGCATCATCACCAAGCGGCCGGGTCAAGTGAAGTGACGACAAATGCGGAACAACCACTCGATCTAAGTGCCAAACCATGTGCATCTACACTGCCTGTTAATGAAACACGTACACATTTAACGGGTGTGAGaGCAAAACCACGGGTTTCAACAGTCCCTGGGCGTAGAACATACACAGAAGATGAGTTGCAGCGTGCCTTACAAGATATAATCAGCGGTAAGCTAGGTACAAGACGCGCTGCTGTGTTATACGGAATTCCGCGTTCAACGTTACGGAATAAAGTGTATAAGCTGTCGATGGAACAGAAGCGTGAGGCTCTAATACAACCACCACCTTCAGTCGTGTTGCCCGATGACATGGAGGAGAAAGATGTATCAGACGCGGACGATGATAAAGACATTGAGAAAGACCTACTTAAGACATCGAATCCGTTAGCATCATCACATTTACCGAACcaaaatgaccgtttacataaAGATAATGAACATAATCGGCCAATTATAGGTACTCCGCCTGCATTACATCCGCAACAACATGCATCGCCTCAATCACAGACCCCACCAATTATGCACCAAGATCTATACGCCACCAATGTTATGCTTCAAAGTCTACTATTTCAGGGTGGGTTTATGTCTCAAAAACCCGAGGAAAGAGCCGTgttcttgcaaaattttgtactaCAGCAGGAAATGTTAAAAAATGCAGTCCGCTCACAGCAGAGTAACGAGAACCAAATGAATAATGGAAAACCATCAACGAGTCCTTTAGACGCACGATTATTTccattattacaacaaaaaatcaattgtaAAACCGAACCATCTGAATTAGTATCGCCACATGAGCCGAATGAAGGTGACGAATCAAATGTGATATTAAAAATTCCGTCCTTCAAACCAATCGCAACCGGTAgtagtggtggtggtggtggtggtggtggtggtggtggtggtggtagtAGTGGAAATAATATTCCTGGCACATCACCCGGATCTGCAACCTCCCCTGTAATTAAGTCGAATAACAGCAATCAAAATCTATTTACACCACACCATTCCGCACTTCATCTGCCGCATCACAGTAATAATTTGTCACATTCGCGAAATAGTCCACCAATGAATTCACCCGGAAATTTACGTCCCGGTTTATCGCCAACACTTAAACGCGAGAATAGTGATTCACAATCACCGCCAGTGGCACAAAAAAGTATGTTGACACTGCACGAGGTGATAGCGAGTAGCATTAGTAAAAGTTTTCAACAACAATCGGGTCATCACGCATCCTCCGTCGGGGGGGACGGTGATCCAAGTAAGAGGCCTCAAATATCAGTGATAAAAAATTTAGGTGGAACTGATATATCACGATTTGCACATAGTCCGAATATGATGAGTTCTAGTTCGCTGCATGCTTCATTAACGGGAACGGGGGGCAAAGGGACAAGACCAAAACGTGGTAAATACCGGAATTATGATCGAGATAGCCTAGTCGAAGCGGTTAAAGCGGTCCAGCGAGGTGAAATGTCAGTGCATAGGGCTGGTAGTTATTACGGGGTGCCACACTCGACACTCGAATATAAAGTAAAGGAAAGACATTTAATGCGGCCACGAAAACGGGAACCTAAACCTCAACCGCTAGACGGCGGTACATCATCAAGTGCGACATCGTCGAGCACAAAAGATATAAGTGCATCGAGTACATTCCGCCCGGTAGATAAATCAAAATCACTTGCACAAcagcaacagcaacaacaacaaccaaagcCATCACTAAAAACACCTCCACCACAATTTTCATCACCATCACCGAACGGTATGAAAATGCCAATATTTGATCCGGCAATGGCAGCAATACAATATACATCACAATTATTATGGCCACATCCGCCCGGTGGTTTTACTGGTTTGCCAATGGATTTTCCAAGGCCCGTGCCTGGTTCAAATCAATTCCCCACAAATCCGGAACAATTTTTTGCCACCCAAATGATGCAAAAATTTCAGGAGAATTCATCAAAAATGCAACTAAATAAACCGCCCGCAAACAATTTATATGATGTAACGACATCGAACGGTTCATTACTCGATGGTATTATACGACAGAGTTTGGATcgtggaaaaaatgaaatggtcGGCCATAGTAGTCTACTCGACCAATTGAGTAAAAGTAATTGTTCGAGTTCGGTGGCAAGTGATGATACAAATTCGAATAATGGTGGAACAAAACGTTCGGCCGGTTCACCATTAAATTATTCACATATAGATATAAAACGGGAACGTTCTAGTCCAATAACAACGTCAGAAAGTGATCGTGATACACCTGATTCGGAGGTGCATAGTGATGTAACAATGCCATCGGCAACGATGAGTAAAGGTGCCGAACATTTATTAAGAATACGTGAAGATCTTACATTAAGATCGGGATCAGCTGATGAACAacaccaaacaaatttaaaacgtaTGGAAGACCATAATGGTGGGGGTAGTGGTGGTGGTACTTTAATACCTAATACAACAGCAATCAGTCAACAATCCGATATGGATGATGGAacatag
- Protein Sequence
- MGRRKWKLYQELIARSNQNSINSASIFHQETSVENQENLELQDDEVTKYIVKIEPKHLENIKNSSIKNNNSIHSIEDGEEQDDDEEVGEVEEVENQKNSTKRHSDKKEEEDNSELVESETPNIPIDWKPQDKCYFCVDGKLLTVNENGDLVAESGYSGQTDTDVALRETPVESDSESSGSYSGSDLRQSANISGNAAAAAAQTAAVSKTLENLLKGTIPNNMTSLESMAATIQAVAALQGLHSVQGINSLYPGLFYQALAQPQAGTGNHSGRDDDSVLSMNESAIRHHHQAAGSSEVTTNAEQPLDLSAKPCASTLPVNETRTHLTGVRAKPRVSTVPGRRTYTEDELQRALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKLSMEQKREALIQPPPSVVLPDDMEEKDVSDADDDKDIEKDLLKTSNPLASSHLPNQNDRLHKDNEHNRPIIGTPPALHPQQHASPQSQTPPIMHQDLYATNVMLQSLLFQGGFMSQKPEERAVFLQNFVLQQEMLKNAVRSQQSNENQMNNGKPSTSPLDARLFPLLQQKINCKTEPSELVSPHEPNEGDESNVILKIPSFKPIATGSSGGGGGGGGGGGGGSSGNNIPGTSPGSATSPVIKSNNSNQNLFTPHHSALHLPHHSNNLSHSRNSPPMNSPGNLRPGLSPTLKRENSDSQSPPVAQKSMLTLHEVIASSISKSFQQQSGHHASSVGGDGDPSKRPQISVIKNLGGTDISRFAHSPNMMSSSSLHASLTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGGTSSSATSSSTKDISASSTFRPVDKSKSLAQQQQQQQQPKPSLKTPPPQFSSPSPNGMKMPIFDPAMAAIQYTSQLLWPHPPGGFTGLPMDFPRPVPGSNQFPTNPEQFFATQMMQKFQENSSKMQLNKPPANNLYDVTTSNGSLLDGIIRQSLDRGKNEMVGHSSLLDQLSKSNCSSSVASDDTNSNNGGTKRSAGSPLNYSHIDIKRERSSPITTSESDRDTPDSEVHSDVTMPSATMSKGAEHLLRIREDLTLRSGSADEQHQTNLKRMEDHNGGGSGGGTLIPNTTAISQQSDMDDGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01457246;
- 90% Identity
- -
- 80% Identity
- -