Thel086863.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula helvola
Gene Symbol
nfxl1
Assembly
GCA_963556165.1
Location
OY744483.1:7153712-7156420[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.88 6.1e+04 -3.0 1.4 14 19 181 186 181 186 0.86
2 20 0.52 3.6e+04 -2.2 0.7 4 10 217 223 217 223 0.92
3 20 7.1e-08 0.0049 19.7 17.3 1 19 231 248 231 248 0.99
4 20 1.4 9.6e+04 -3.6 1.8 5 10 273 278 273 278 0.94
5 20 1.4e-05 0.98 12.3 11.8 1 19 284 303 284 303 0.96
6 20 0.64 4.4e+04 -2.5 1.8 5 10 327 332 327 332 0.94
7 20 9.1e-07 0.063 16.2 12.0 1 19 338 356 338 356 0.99
8 20 7.9e-08 0.0055 19.5 12.1 1 19 391 409 391 409 0.98
9 20 0.19 1.3e+04 -0.8 0.7 1 5 418 422 418 427 0.75
10 20 0.77 5.3e+04 -2.8 1.8 5 10 432 437 432 437 0.95
11 20 0.025 1.7e+03 2.0 16.3 3 18 445 460 443 461 0.91
12 20 2.7e-08 0.0018 21.1 14.1 1 18 470 487 464 488 0.93
13 20 2 1.4e+05 -5.2 9.5 9 18 534 543 525 544 0.89
14 20 0.079 5.4e+03 0.4 6.7 3 12 557 566 556 566 0.89
15 20 1.2 8.1e+04 -3.4 0.9 6 10 627 631 626 631 0.86
16 20 2.5e-06 0.17 14.8 7.3 1 12 637 648 637 648 0.97
17 20 0.75 5.2e+04 -2.8 0.8 15 18 661 664 660 665 0.80
18 20 0.0021 1.5e+02 5.4 15.6 3 19 677 693 676 693 0.94
19 20 4.8e-05 3.3 10.7 13.2 1 17 747 765 747 767 0.86
20 20 1.9 1.3e+05 -4.0 1.6 6 10 797 801 796 801 0.88

Sequence Information

Coding Sequence
atGAGCAAACGCGATAAATCCAACAAAGTGCAGAGTCCCAATGCTTGGGGTAATGTACAGCAACCACAGGGACGACCGAAACCGGCAAAAAGTcatcaaaattctgaaataaaatcaaacccTGTCAAAAATCAGGAAAAGTTTAACAAAGTACAAGCCAAACACTTGGAAGCCGCTAGTAAGCTAATCAAAGAATATGAATCGAGTTCGGATGAAGAAGAAATTACCGCCGGAGATGATTTACTAAAGAATGTGTTCCAAAGTTATGCTGGCAATTCGGCTGATCTCTCGAAGAcccaacaatttttggaaaatgtgttCCAATCCGGGTCAGCAACATGTCTGATTTGTATTGGGGGCGTTAAACGTGCCGATGCGATATGGTCGTGCGAAAAGTGTTACACATTTTTCCATCTGCAATGCATTCAACGATGGTCTAATGATAGTGTTTCGCTGAAACAGATGAACACAAGCTCGGACCAaggatattataataatatggGGATTTATGTGCCTAAGAAATCGAAACCTATTGTATGGGACTGTCCAAAATGTCGCACTACTTACAGCCCGGATCAAATACCACGGCACTATATCTGCTTCTGTGGAAAAGAGGTGAGTCCAGTTAATCATCTGTGGAATATTCCACATTCATGCGGGGAATCATGTGGTAAACCTCTAAAACCAGAATGTGGCCATAAATGTGTGTTGCTTTGTCATCCAGGCCCTTGCCCGCCCTGTCCTCAAATTATATCGATTTCATGTAAGTGTGGAAATTCAGCACCACGCACGGTTCGATGCACTCAGAAATCCTGGACTTGTAATAAAAAGTGTAACTTGAAACTGGGATGTGGGATTCACGGTTGTGAATTGATTTGCCACGATAAAAACGAATGTCCGCCATGTAAAAAGAAAAGTAAACAAAGATGTGTTTGTGGATCTAATTTTGAGGAACGTAATTGTTCACAATCGGGATGGAAATGTAAAAAAGTCTGCAACAAAATGTTCCCCTGTGGTCTTCATAATTGTGAGAAAATTTGCCATAACAATGATTGCGGTAACTGTCCGTATGGGGAGCCAAGATCTTGTCCGTGTGGCAAACAATTTTCAGTTGCGCCTTGTTCGGAACAAGTGGAATCTTGTGGTGATACATGTCAGAAGACTCTGCCCTGCGGAGATCATAATTGTGCTTTACGATGCCACAAGGGCGAGTGCAGTCCGTGCTCGGCAATCGTTGAGAAAAAATGTCGATGTGGTCAGCATTCTAAAGAGTTGCCATGCTCCAAAACGTTCACGTGCGAATCGAAATGCAAGCAAATCAGGGAATGCAAAAAACATCCATGTAACCGGAAATGTTGTGATAACCAGTGCCCACCATGCGACAAAGTGTGCGGTAAAACGTTATCATGCACCAAGCATAAATGCCAGTCACTGTGTCACAACGGTCCCTGCTATCCATGCAACCAAAAGTCGATTATTAAATGTCGCTGTGGAAGCACCACCAAAGAAGTCCCATGTGGCCGTGAACGTAAATCAGCTTCACCGAAATGTTTGCTGGCATGTAAAATTGCTTCAAAGTGCCATCATGAAAATCCGCATCGTTGTCACCAGAATGATTGCCCCATTTGTgtccaaatttgtaatttatacaaCGATACCACGGGATGCGAGCATCCGTGTGAAAGCCGATGTCACGATGCCGTCAAAGTATTGATCACCGATAAGAATTTTAAGCCTGCTCTTCCATGGGAGGTGCAAATGGAAACGTACGAAGTCCGAAAATTACCACATCCCGCTTGCCAAATTCAGGTTGCGGCTATTTGTTTGGGTGGACACGAAGAATGTTTATGGCCATGCTGGAATTCGAAGCCGACAAGTTGTCAACGGGCATGTGGCCGGAAGTTAAAATGTGGAAACCACGAGTGTCAACGGTTGTGTCATGAGGTGAAGGATTTAAAATCGACTAAACAAGAAGAAACTTGCCAATCGTGTACAGAAGGTTGTAAAGTAGCACGGTCTGATGGTTGCATTCATCCCTGTAAACGAGCATGCCATCCGCCGCCATGCGATCCATGCACCGCCAACATTAAAACGCAATGCCACTGTGGACTATCGCCAGTATTCTACAAGTGTGGTCAATTTTTCCGTCCAGCTAAAGATGATGAGGATCGAATGCAGTTGGCCGAAGAAAAGGAGAAAATTATGAGTTGCGGCAATCGATGCATTCGAAATTATCCATGCGGTCATCAATGCCGTGCATCATGTCACTCGGGAAAATGTCCAAATCCCGACCAATGTAAGAAAAAAGTCAAGCTTTACTGTCAATGTAAGAATGCGAGGCAGGAAGTAACGTGCGAGAAAATACGCATTGAAAATTTCCAAATGCAGTGCAACGAGACATGCACAGCCAAAAAACAGGAACTCAAAGAGGCAGCCAAACGAAAGGAGGCGGAACTCAAAAAGCAGGAGGAGGACCGAAATCGAATCGAGTTGGAGGAATTCGAGAAGAAATACGCAAAGAAAAAGCCTCGTGAACGTAAGACTCTAGTAGTTGAGGATCAGGAGGATACAAATTTAGCGAAAATTGGCCTAATCGTTGCGAGTGGCTTAGTTGTAATTTCGTTTGTGGTTTATCTGttgactaaataa
Protein Sequence
MSKRDKSNKVQSPNAWGNVQQPQGRPKPAKSHQNSEIKSNPVKNQEKFNKVQAKHLEAASKLIKEYESSSDEEEITAGDDLLKNVFQSYAGNSADLSKTQQFLENVFQSGSATCLICIGGVKRADAIWSCEKCYTFFHLQCIQRWSNDSVSLKQMNTSSDQGYYNNMGIYVPKKSKPIVWDCPKCRTTYSPDQIPRHYICFCGKEVSPVNHLWNIPHSCGESCGKPLKPECGHKCVLLCHPGPCPPCPQIISISCKCGNSAPRTVRCTQKSWTCNKKCNLKLGCGIHGCELICHDKNECPPCKKKSKQRCVCGSNFEERNCSQSGWKCKKVCNKMFPCGLHNCEKICHNNDCGNCPYGEPRSCPCGKQFSVAPCSEQVESCGDTCQKTLPCGDHNCALRCHKGECSPCSAIVEKKCRCGQHSKELPCSKTFTCESKCKQIRECKKHPCNRKCCDNQCPPCDKVCGKTLSCTKHKCQSLCHNGPCYPCNQKSIIKCRCGSTTKEVPCGRERKSASPKCLLACKIASKCHHENPHRCHQNDCPICVQICNLYNDTTGCEHPCESRCHDAVKVLITDKNFKPALPWEVQMETYEVRKLPHPACQIQVAAICLGGHEECLWPCWNSKPTSCQRACGRKLKCGNHECQRLCHEVKDLKSTKQEETCQSCTEGCKVARSDGCIHPCKRACHPPPCDPCTANIKTQCHCGLSPVFYKCGQFFRPAKDDEDRMQLAEEKEKIMSCGNRCIRNYPCGHQCRASCHSGKCPNPDQCKKKVKLYCQCKNARQEVTCEKIRIENFQMQCNETCTAKKQELKEAAKRKEAELKKQEEDRNRIELEEFEKKYAKKKPRERKTLVVEDQEDTNLAKIGLIVASGLVVISFVVYLLTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01455351;
90% Identity
iTF_01460818; iTF_01459165;
80% Identity
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