Tfem003645.1
Basic Information
- Insect
- Tiphia femorata
- Gene Symbol
- RHOBTB1
- Assembly
- GCA_944319705.1
- Location
- CALUEQ010000072.1:81393-89244[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3e-09 2.1e-06 28.0 0.1 4 44 257 296 254 315 0.83 2 3 0.00078 0.22 11.8 0.0 52 99 396 451 382 460 0.74 3 3 9.4e-20 2.7e-17 63.1 0.0 5 107 485 586 482 589 0.93
Sequence Information
- Coding Sequence
- ATGGACAATGAGCAGCCGCACCAGGAACTGGTCAAGTGCGTGGTCGTGGGTGACACGGCAGTCGGAAAGACCAGGCTGATTTGCGCCAGGGCTTGCAACAAGCACGTGTCCCTCTCGCAACTCCTAACCACCCACGTGCCCACCGTCTGGGCTATTGACCAGTATCGAATTTACAAGGATGTCTTGGAGCGATCTTGGGAGGTCGTCGACAATGTAAACGTCTCCCTGCGCCTATGGGACACTTTCGGCGATCATGAGAAGGATCGACGTTTCGCTTACGGAAGATCGGACGTCGTGCTACTATGCTTCTCAATCACCAATCCCGTTTCTCTGCGCAACTGCAAGGCGATGTGGTACCCGGAGATTCGCAGGTTTTGTCCACAAACGCCGGTATTGCTGGTTGGTTGCAAGAACGATTTGCGGTACATGTACCGGGACGAGACTTATCTCAGCTACTTTCGCGATCGCAGTCCTTTCGTGAGGGCAACGAGGAAGAGCGACCTGGTGATGCCCGATCAGGCGCGGGCGGTAGCACGAGAACTCGGCGTCTGTTACTACGAGACCAGCGTGTTCACTTATTACGGTGTGAACGAGGTCTTCGAGAACTCCATACGCGCGGCCCTGATCGCTCGCCGTCAACAACGCTTTTGGATGACGAATCTTAAGAGAGTTCAACGACCTCTGCTTCAAGCACCGTTTTGCCCACCTAAGCCGGTACCACCGGAAGTGTGTCTTGCGGCGAGTACCTACGAGGAGAACATGAAGACACTTTGGACGAAGCCGGTTCACACCGATGTCACCCTGATAGCAGGCAACTGCACATTCGCGGCGCATCGGTGCCTATTGGCTGCAGCTTCACCCGCCTTTCATCGACTCTTCTCTATGGAGCTCGTTCATGAATTGACACCGCGGAGTTCCAGCGAATCCAGCATGGTTAGCACCTTCGGCGAAGCAACTGTAGGTGACTTCAATGACGACACCGAGTGTCTGATTCGCATCGATCAATCTAAACCTGCAAAAGTCTGGGAACAATTGAAGCGGAGATCCAGTTTTCAAGTACTGCCTACGATGGATAATCAAAGGAAGACAACTGGTGGCGCTACCAGGGAGCTCAATCATCCTGCCTTCCAGAATATTCGCATATGCCTGACGGAGAACTCGAACGGCGTGCAGCAGCCAACCACCGTGGTAACGCTCTCCAAGCTTATCACACCACAGGCGATGCAGCAGTGTCTGCAATTCATTTACACGGGCAGCTTGGATAAACGGTATCACGATCTACAAACAGCTCCTATCGGGCTTCTACTGGAGATCAGGCAGGCGGCCGAGTTTCTCGAATTGCCGCAGCTGCTGATGGTCCTTGGCAGCATACAGACCAGGGATCAGTTCGTAAACAGCGATCTCAACAATCGTTACAAGCAAGTGGTGAGGCAACGATTGGAAGACATTTGCCTGGAACAAGGGCTGTTCGCCGACGTTGTCTTCGAATTGGACGATGGAAACGTACCTGCCCACCGAGCGATTCTCACTGCCCGATGCGATGTTATGAAAGCAATGTTCTCCGGCGACTTTCGAGAGAGCAGCGCCAAAGTAATAGTATTTCCTGGAGTGCGCGAGTATACGTTCCACAAGTTGCTCTGCTATCTGTACACGGACGAGGTGCCAGCCATATCCTCGGCCAGATGTCTCAATCTACTCGAACTGGCGAATCGCCTCTGCCTTCCGCGCCTGGTGAATCTAGTCGAGAGCAGGGTCATAGAGGATCTCGACCGTTTGTCGCAGAACGACGGTAACGAGGCGGTGGAGAATTGCCTGAGATTGTTGGAGCCGTGCAAGCTGCACAATGCGGACCAACTGGCTGACTGGTGCATGAATCATCTTTGCGTTAATTACAACAAGCTGTGCAAGATGTCACCGCGAAGCGTGCGTCTCCTTCATCCGGAGAACCAGGAATACTTGAACGAACATCGATGGCCGCCAGTATGGTACCTCAAGGATTACGATTACTATCAGAAATGCCTGGCGGAGCAGGATCGCGAGAGTAAGCCCACCTTGAAGAGAAACCGGAATCAGTCCGGGTGTTTGTGCTTCTCCAGCTCGAGCAAGAGCAGGCGCGAGGGTAGCGGAAACGGAGGGACGACGACGTCGACTGCCTCCACCGGCGACACGCCGGCCGATCGTCCGCTTTTCGACGCCTCCACCGAATCGGGCGGCGAGCAGGCTGTATGA
- Protein Sequence
- MDNEQPHQELVKCVVVGDTAVGKTRLICARACNKHVSLSQLLTTHVPTVWAIDQYRIYKDVLERSWEVVDNVNVSLRLWDTFGDHEKDRRFAYGRSDVVLLCFSITNPVSLRNCKAMWYPEIRRFCPQTPVLLVGCKNDLRYMYRDETYLSYFRDRSPFVRATRKSDLVMPDQARAVARELGVCYYETSVFTYYGVNEVFENSIRAALIARRQQRFWMTNLKRVQRPLLQAPFCPPKPVPPEVCLAASTYEENMKTLWTKPVHTDVTLIAGNCTFAAHRCLLAAASPAFHRLFSMELVHELTPRSSSESSMVSTFGEATVGDFNDDTECLIRIDQSKPAKVWEQLKRRSSFQVLPTMDNQRKTTGGATRELNHPAFQNIRICLTENSNGVQQPTTVVTLSKLITPQAMQQCLQFIYTGSLDKRYHDLQTAPIGLLLEIRQAAEFLELPQLLMVLGSIQTRDQFVNSDLNNRYKQVVRQRLEDICLEQGLFADVVFELDDGNVPAHRAILTARCDVMKAMFSGDFRESSAKVIVFPGVREYTFHKLLCYLYTDEVPAISSARCLNLLELANRLCLPRLVNLVESRVIEDLDRLSQNDGNEAVENCLRLLEPCKLHNADQLADWCMNHLCVNYNKLCKMSPRSVRLLHPENQEYLNEHRWPPVWYLKDYDYYQKCLAEQDRESKPTLKRNRNQSGCLCFSSSSKSRREGSGNGGTTTSTASTGDTPADRPLFDASTESGGEQAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691184;
- 90% Identity
- iTF_01001474; iTF_01002178; iTF_01000657; iTF_00452018; iTF_00398179; iTF_00754851; iTF_01003620; iTF_01006218; iTF_01004363; iTF_01005242; iTF_00687273; iTF_00997123; iTF_00391403; iTF_00629193; iTF_00633708; iTF_01498286; iTF_00738449; iTF_00292340; iTF_01508949; iTF_00397398; iTF_00459870; iTF_00773888; iTF_01420995; iTF_01067009; iTF_00684230; iTF_01069735; iTF_01065642; iTF_01068362; iTF_01417770; iTF_00684843; iTF_01069041; iTF_00216466; iTF_00233299; iTF_00230100; iTF_01420341; iTF_01066326; iTF_01419062; iTF_00734012; iTF_01067677; iTF_01070429; iTF_00303171; iTF_00964545; iTF_00215779; iTF_00087268; iTF_00225988; iTF_00625572; iTF_00228742; iTF_00085479; iTF_00961895; iTF_00228041; iTF_00088906; iTF_00223946; iTF_00226668; iTF_00220654; iTF_00306350; iTF_00088112; iTF_00227345; iTF_00360977; iTF_00962577; iTF_00982353; iTF_00983666; iTF_01122515; iTF_00219188; iTF_00232052; iTF_00086389; iTF_00983029; iTF_00221974; iTF_00084633; iTF_00217818; iTF_00360282; iTF_01539674; iTF_00676091; iTF_00231388; iTF_00963261; iTF_01169245; iTF_00223262; iTF_00378884; iTF_00378103; iTF_00379709; iTF_00381950; iTF_01087300; iTF_00058785; iTF_00252161; iTF_01364738; iTF_01199491; iTF_01266947; iTF_00253668; iTF_00730148; iTF_01477700; iTF_00128325; iTF_00129093; iTF_01198757; iTF_01267653; iTF_01422309; iTF_01474789; iTF_01497541; iTF_00126822; iTF_00868198; iTF_01421639; iTF_01423752; iTF_00181385; iTF_00252905; iTF_00652905; iTF_00729417; iTF_00730857; iTF_00867529; iTF_01474025; iTF_01477001; iTF_00058026; iTF_01405866; iTF_00452651; iTF_00769771; iTF_01090060; iTF_01254892; iTF_01406636; iTF_01513548; iTF_01408365; iTF_00265102; iTF_00280046; iTF_01268366; iTF_01476334; iTF_01520366; iTF_00280655; iTF_00298416; iTF_00765744; iTF_00059537; iTF_01057745; iTF_01306577; iTF_00291634; iTF_01056146; iTF_01229106; iTF_00294579; iTF_01129427; iTF_01407475; iTF_00296116; iTF_00841172; iTF_01269140; iTF_01207445; iTF_00109910; iTF_00127574; iTF_00297654; iTF_00770455; iTF_01473271; iTF_00126072; iTF_00295352; iTF_01077560; iTF_01130905; iTF_01355513; iTF_00868954; iTF_00254427; iTF_00293819; iTF_00296891; iTF_00885243; iTF_01056987; iTF_01245307; iTF_00905500; iTF_00293053; iTF_00721341; iTF_01475549; iTF_00414398; iTF_01409278; iTF_00015455; iTF_00129855; iTF_00264383; iTF_00343263; iTF_00255168; iTF_01228448; iTF_01395200; iTF_00141889; iTF_00873858; iTF_01270596; iTF_00963910; iTF_00864714; iTF_01538061; iTF_00140654; iTF_00761040; iTF_00215089; iTF_00221329; iTF_00217140; iTF_00225305; iTF_00898865; iTF_00860470; iTF_00219864; iTF_01123128; iTF_01269881; iTF_01512889; iTF_00142524; iTF_00141281; iTF_00118077; iTF_00218494; iTF_00222593; iTF_00966088; iTF_00763299; iTF_00184006; iTF_00863339; iTF_00861964; iTF_00024686; iTF_00864046; iTF_00866768; iTF_00866082; iTF_00183349; iTF_00862647; iTF_00865400; iTF_00861241; iTF_00762621; iTF_01232456; iTF_01523465; iTF_00756743; iTF_01100711; iTF_00262753; iTF_00828869; iTF_00265805; iTF_01103661; iTF_01299373; iTF_00829614; iTF_00798673; iTF_00263602; iTF_00266546; iTF_00439573; iTF_01102168; iTF_00016107; iTF_00385645; iTF_00417678; iTF_00016752; iTF_00014803; iTF_01261898; iTF_01015929; iTF_00182044; iTF_00224620; iTF_00316883; iTF_00317543; iTF_00728725; iTF_00351194; iTF_00046254; iTF_00048049; iTF_00047093; iTF_00938105; iTF_00996440; iTF_01560537; iTF_01255766; iTF_00393668; iTF_01424444; iTF_01233727; iTF_01233069; iTF_01235092;
- 80% Identity
- -