Basic Information

Insect: Calameuta filum
Gene Symbol: RHOBTB1
Assembly: GCA_031763695.1
Location: JARPRI010000252.1:1234272-1241106[+]

Transcription Factor Domain

TF Family: BTB
Domain: zf-C2H2|ZBTB
PFAM: PF00651
TF Group: Zinc-Coordinating Group
Description: The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3e-09 6.7e-07 29.5 0.0 4 44 257 296 254 315 0.83

2 3 0.00064 0.14 12.3 0.0 52 101 395 452 379 461 0.75

3 3 3.5e-19 7.8e-17 61.5 0.0 5 108 484 586 481 588 0.93

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3e-09	6.7e-07	29.5	4	44	257	296	254	315	0.83
2	3	0.00064	0.14	12.3	52	101	395	452	379	461	0.75
3	3	3.5e-19	7.8e-17	61.5	5	108	484	586	481	588	0.93

Sequence Information

Coding Sequence: ATGGACAATGAGCAACCGCACCAGGAGCTGGTCAAGTGCGTGGTCGTGGGGGACACCGCGGTCGGAAAGACCAGGCTGATCTGCGCCAGAGCTTGCAACAAGCACGTATCCCTTTCGCAGTTACTGACGACGCACGTACCCACAGTCTGGGCTATCGATCAGTACCGAATTTATAAGGACGTTCTGGAACGTTCCTGGGAAGTCGTGGATAATGTGAATGTCTCGTTACGACTTTGGGACACTTTCGGAGATCACGAAAAAGATCGTCGATTTGCATACGGCAGatCAGACGTCGTGCTACTATGCTTCTCCATAACGAATCCCGTATCGCTGCGAAATTGCAAGGCGATGTGGTATCCAGAGATTCGTCGATTTTGTCCCCAAACTCCCGTACTACTTGTGGGTTGCAAAAACGACCTCCGGTACATGTATCGAGACGAGACATACCTAAGTTACTTCCGTGACCGCAGTCCTTTTGTAAGgGCGACACGGAAGAGTGATCTAGTGATGCCTGATCAGGCAAGAGCAGTTGCAAGAGAGTTGGGAGTCTGTTATTACGAAACCAGCGTGTTCACGTATTACGGCGTGAACGAAGTCTTTGAGAATTCCATACGAGCTGCTTTGATAGCGCGCAGACAACAGCGATTTTGGATGACGAATCTGAAAAGGGTACAGAGGCCTTTGCttcagGCTCCATTCTGTCCGCCAAAACCAATTCCACCTGAAGTCACTTTGGCGCCGAGCACTTACGAGGAGAACATGAAAGCTTTGTGGACGAGGCCTGTTCATACAGACGTCACTTTAATTGCTGGTAACTGCTCGTTTCCGGCACATCGATGTCTCTTGGCTGCGGCGTCACCGGCGTTTCATCGGCTATTCTCAATGGAACTGGTCCAGGAACTAACACCTCGTAGCTCCAGCGAATCCAGCATGGTGAGTACCTTCGGGGAAGCCACAGTCGGAGACTTTAACGATGATACCGAGTGTCTGATTCGCATAGATCAGTGTAAGCCTGCCAAAGTCTGGGAGCAGCTTAAGCGACGTTCAAGCTTTCAGGTGCTACCGACCATGGACAGTCAAAGAAAAGCAGCAGGTGCAATGAGAGAGCTTAATCATCCGGCTTTccaaaatattcgtatatcaCTGaCTGAAAATTCACATGGAGTACAACAACCAACGACAATAGTAACGCTTTCAAAGCTGGTGACGCCACAGGCAATGCAGCAATGCTTACAATTCATATACACAGGAAGTCTGGATAAACGTTATCACGATCTTCAAACAGCTCCTATCGGGCTTCTACTGGAGATCAGGCAGGCAGCTGAATTTCTCGAGTTGCCGCAGCTCTTGATGGTCCTCAGCAGCATTCAGACGAGAGAGCAGTTCATCAACAGTGATCTCAATAATCAGTACAAGCAAGTGGTAAGACAGCGACTCGACGACATCTGCTTGGAGCAAGGTTTATTCGCTGACGTAATGTTCGAATTGGATGACGGAAGTATGCCAGCGCACAGGGCAATACTTACTGCTCGATGTGACATGATGAAAGCCATGTTCTCTGGAGACTTTCGCGAGAGCAGTGCTAAAGTCATAGTCTTTCCTGGCGTAAGAGAGTACACGTTTCACAAATTACTGTGTTACCTGTATACGGATGAGGTTCCAGCGATTTCGTCAGCACGCTGCCTGAACCTTCTCGAATTGGCCAACAGACTGTGCTTACCGCGACTTGTGAACCTGGTCGAGAACAGAGTGATCGAGGATCTCGATAGACTTTCGCAAAACGATAGTAACGAGGCGGTAGAAAATTGTCTGAGATTACTAGAGCCGTGCAAGttgCACAATGCAGATCAATTAGCCGATTGGTGCATGAATCATCTGTGCGTGAATTACAATAAACTGTGTAAAATGTCACCGCGCAGCGTGCGACTTCTGCATCCGGAGAATCAAGAGTATCTGAACGAGCATCGATGGCCGCCAGTCTGGTATCTCAAGGACTACGACTACTATCAAAAGTGTCTGGCCGAACAAGACAGAGAGAACAAACCCACGCTCAAGAGGAATCGGAATCAGTCTGGGTGTCTCTGCTTTTCCGGCTCGAGCAAAGCAAGACGAGAAGCTAATTCGGCAACGAACGAGACACCAGTCGATCGGCCACTGTTTGATGCTTCGACCGAATCCGGCGAGCCAGTATGA
Protein Sequence: MDNEQPHQELVKCVVVGDTAVGKTRLICARACNKHVSLSQLLTTHVPTVWAIDQYRIYKDVLERSWEVVDNVNVSLRLWDTFGDHEKDRRFAYGRSDVVLLCFSITNPVSLRNCKAMWYPEIRRFCPQTPVLLVGCKNDLRYMYRDETYLSYFRDRSPFVRATRKSDLVMPDQARAVARELGVCYYETSVFTYYGVNEVFENSIRAALIARRQQRFWMTNLKRVQRPLLQAPFCPPKPIPPEVTLAPSTYEENMKALWTRPVHTDVTLIAGNCSFPAHRCLLAAASPAFHRLFSMELVQELTPRSSSESSMVSTFGEATVGDFNDDTECLIRIDQCKPAKVWEQLKRRSSFQVLPTMDSQRKAAGAMRELNHPAFQNIRISLTENSHGVQQPTTIVTLSKLVTPQAMQQCLQFIYTGSLDKRYHDLQTAPIGLLLEIRQAAEFLELPQLLMVLSSIQTREQFINSDLNNQYKQVVRQRLDDICLEQGLFADVMFELDDGSMPAHRAILTARCDMMKAMFSGDFRESSAKVIVFPGVREYTFHKLLCYLYTDEVPAISSARCLNLLELANRLCLPRLVNLVENRVIEDLDRLSQNDSNEAVENCLRLLEPCKLHNADQLADWCMNHLCVNYNKLCKMSPRSVRLLHPENQEYLNEHRWPPVWYLKDYDYYQKCLAEQDRENKPTLKRNRNQSGCLCFSGSSKARREANSATNETPVDRPLFDASTESGEPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691184;
90% Identity: iTF_01454261;
80% Identity: iTF_00254427; iTF_00255168;