Tbis009155.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010002475.1:81592-91974[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-75 2.1e-71 240.7 26.4 1 298 126 406 126 408 0.91 2 2 0.33 5.8e+03 -3.8 7.9 134 226 441 470 411 483 0.40
Sequence Information
- Coding Sequence
- ATGGGTAGACGCTCGAAAGCGGTGACAACGCCGAACGCGACAGACACTGAGGAGGAAGGCGACCTGTTCACAGACGGCGACTTCGAGGACTCCGACGATGACATATTTGGTGATACGATCAGCCATACTTTGGTGCCTGTGAATGAAACTCTAAACGTTGTTATCAGAAATTCCGAGGCCGATATAGATTTAAGGAGTAGTGCTTGTGATGTGCGTAACAATAATGTTGATATAAACAAAATGGTTGGTCAAAATAGCTGCGTTAACAATGGCTATGAGACGAATAGCGGTGACAGTTCTTCTGAGTTGCGTCATTCGTCGCAGGAGGACTTTACGCCGTCTATTGTCGGAATAATCGGACAACAGCACAATCATGCGGAACAGAGGTTGGCAGCTCGTCGTGCTGCCAGAGCAGAGGCGAGGGAGATACGCATGCGGGAGCTGGAGCGGCAGCAGAGGGAGCAAGAGGACCATGCTGATAAGGCTTATGATATGTATGCCGAGACGGTGGGTCGCCGTGGCCCCTCACGGTTGACTGGTCCAGCATTGCACTCGCCGCGACGGAGCTCCGAAGATTCTGCTGAAGACGGGTTCTGTCTTAAAGATCTTAGGCACGAGTTGAAGGAATATGAGGACAAATTCAGGAAAGCTATGATCTTGAACGCTCAGCTGGATAATGATAAGGCGGCGCTCGCTTACCAGCTGGAATTGCTCAAGGACAAGATCGAGGAGTTGCAACAGGAGCATGCGCAGCTGCAGCGAGAACACAAAGATAAATGTTCAGCGCACGAGCGGCTCAGACGTGAACACGTGTCAATGGAGAGGGAGCTTTGCGGTGCGAGGGAGGCGATCGTGGCGAGGGACTCTGCGGCCGCGGCTGCTGGGAGGGTGTTCGTTCAGGCGGAGGAAGTCGACACCGAGGCGGGGGAGGCGGGGCAGTACTGTCCTGCTTTGGCGCTCGTTACTAAGGAGTCCGAGATGATGTTGAATGAAGCTGGCGAAGGGACGCTTGACGTTCGGTTGCAAAATTTACTAAACTCGAAGCAAGCGCTCGAGTCAGAAGTTAGAAAATTGAAGTTGCAATTGAACGAAGAGCGGACGGCGAGGCATAACGGCGTGTCGCATCCGGATGATGAGTCATATGAGAATGAAGTGGAAAGTCTCCGTAAATGTATATCGGAGACGAAGGCGCGCGCGGCCCGAGCCGAGGCGGAGGCGGCTCTCCAGCACGCGGCAGTGGCCCGACTGGAGGCACAGCTCAGCAGGCTCAGGGCTGCCACTGCGCAGAGGGATGAAGAAGAGGAGTCACTCAAACAGGACAAGAGACGGTTGCAGAGAGAGGCGCGCGAAGCCCTGAACCGTGTGGAAGAATTGGAAACTGAAAATAGTCATCTAACTAAAAGATTAGATAAACTTAAGAACGCCAAGTCTGCTTTGTTGAAAGAGCTTTGA
- Protein Sequence
- MGRRSKAVTTPNATDTEEEGDLFTDGDFEDSDDDIFGDTISHTLVPVNETLNVVIRNSEADIDLRSSACDVRNNNVDINKMVGQNSCVNNGYETNSGDSSSELRHSSQEDFTPSIVGIIGQQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPSRLTGPALHSPRRSSEDSAEDGFCLKDLRHELKEYEDKFRKAMILNAQLDNDKAALAYQLELLKDKIEELQQEHAQLQREHKDKCSAHERLRREHVSMERELCGAREAIVARDSAAAAAGRVFVQAEEVDTEAGEAGQYCPALALVTKESEMMLNEAGEGTLDVRLQNLLNSKQALESEVRKLKLQLNEERTARHNGVSHPDDESYENEVESLRKCISETKARAARAEAEAALQHAAVARLEAQLSRLRAATAQRDEEEESLKQDKRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451472;
- 90% Identity
- iTF_01451472;
- 80% Identity
- -