Tpel016242.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_948150575.1
- Location
- OX411248.1:9246706-9259438[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-76 8.7e-72 241.9 23.4 1 297 129 408 129 410 0.91 2 2 0.13 2.4e+03 -2.5 5.8 22 161 443 471 415 485 0.44
Sequence Information
- Coding Sequence
- ATGGGTGTTCATCCGAAAGCGGTGACAACACCGAACACGACAGACAGTGAGGAAGGAGGCGACGTATTCACAGATGGTGATTTCGAGGATTCTGACGAAGATATATTCGGCGATAGCATCAGCCATACTTTAGTGCCCGTGAATGAGACTCTAAATGTTGTTATAAGAAATTCCGAAGCAGATATAGACTCAGCGAATAGTGTTTGTGATGTACATAACAATAATATTGATATAGACAAGATGGTCGGACAAAATACTTGTGTAAACAATTTTAACAATGGATATGAGACGAATAGTGGTGACAGTTCTTCTGAGTTACGTCACTCGTCACACGAGGACTACACGCCGTCTATAGTCGGAATAATTGGACAGCAACATAATCATGCGGAACAGAGATTGGCAGCACGCCGCGCTGCGAGGGCTGAGGCGAGGGAGATACGCATGCGGGAACTCGAGCGTCAGCAGAGAGAACAAGAAGATCATGCTGACAAGGCTTATGATATGTATGCCGAGACGGTGGGTCGTCGTGGTCCCTCACGATTAACAGGTCCAGCGTTGCACTCACCACGACGGAGTTCCGAGGATTCCGCTGAGGATGGTTTCTGTCTTAAAGATCTTAGGCACGAGTTGAAAGAATATGAGGACAAATTCAGGAAAGCTATGATCTTGAATGCCCAACTAGATAATGATAAGGCGGCGCTCGCTTATCAACTTGAACTGCTCAAGGACAAGATTGAGGAGTTGCAACAGGAACATGCGCAGTTACAGCGAGAGCACAAAGACAAGTGTTCAGCACACGAGCGATTGAGACGTGAACATGTATCCATGGAGAGAGAGCTTTGCGGTGCGAGGGAAGCTATCGTAGCGAGAGACTCGGCGGCCGCGGCTGTCGGAAGAGTGTTCGTTCAGGCCGAAGAAGTCGACACTGAGGCCGGGGAGGGGGGACAATATTGTCCCGCTTTGGCGCTCGTTACTAGAGAATCAGAGATGATGTTGAATGAAGCCGGAGAGGGAACTCTCGATGTTCGGTTGCAAAATCTTCTGAACTCAAAGCAAGCATTGGAGTCTGAGGTTAGAAAATTGAAATTGCAATTGAACGAGGAGCGAACGGCGAGACATAATGGTGTATCGCATCCTGATGATGAGTCATATGAGAATGAAGTGGAAAGTCTTCGCAAATGCATATCTGATACGAAGGCGCGTGCGGCACGAGCGGAGGCGGATGCGTTCTTACAACATGCTGCCGTCGCCAGACTGGAGGGCCAACTCAGTCGACTTAGAGCTGCCACCGCTCAGAGAGATGAAGAGGAGGAGATCCTCAAACAGGATAAGAGACGACTGCAGAGAGAGGCCCGTGAAGCTTTGAACCGCGTTGAGGAATTAGAAACTGAAAATAATCACCTAACTAAGAGACTAGATAAACTTAAGAATGCCAAGTCGGCTTTATTAAAGGAGCTTTGA
- Protein Sequence
- MGVHPKAVTTPNTTDSEEGGDVFTDGDFEDSDEDIFGDSISHTLVPVNETLNVVIRNSEADIDSANSVCDVHNNNIDIDKMVGQNTCVNNFNNGYETNSGDSSSELRHSSHEDYTPSIVGIIGQQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPSRLTGPALHSPRRSSEDSAEDGFCLKDLRHELKEYEDKFRKAMILNAQLDNDKAALAYQLELLKDKIEELQQEHAQLQREHKDKCSAHERLRREHVSMERELCGAREAIVARDSAAAAVGRVFVQAEEVDTEAGEGGQYCPALALVTRESEMMLNEAGEGTLDVRLQNLLNSKQALESEVRKLKLQLNEERTARHNGVSHPDDESYENEVESLRKCISDTKARAARAEADAFLQHAAVARLEGQLSRLRAATAQRDEEEEILKQDKRRLQREAREALNRVEELETENNHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01453287;
- 90% Identity
- iTF_01453287;
- 80% Identity
- -