Tbis006659.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- -
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010000698.1:137058-143721[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-11 1.8e-08 34.0 0.0 4 39 161 197 159 201 0.90 2 4 2.8e-12 2.7e-09 36.5 0.5 5 39 216 250 214 253 0.93 3 4 4.1e-15 4.1e-12 45.6 0.2 3 45 269 312 267 312 0.96 4 4 4.9e-17 4.8e-14 51.8 0.0 2 38 320 357 319 362 0.93
Sequence Information
- Coding Sequence
- ATGCCCGGTCACGGAGTGCTGGCTGTCAAGAGCGAGCCTCTGTCTGATGAAGATGACTCCAATATAGGTTATAACGGACTTACATCACATGCAGTCAGAGTAAAAGTGGAAAGTGAAAATAAAGGCATCTTGCACTCAGTTCCACATTTACTGCATTTACAGCATGTCGAGGTTTTGGAGGAAGTGTCTCCTGCCGCACCTTCTGCGACTCCAGTGCCCGTCTCCAAACCCCCCGGGACGCAGGAGCCCGCGTTATTGCAGACACTTGAATCACAACCTAGAAATGCGGGTTCTGCTGCAATCCTGGACCACTCCATACTGCTGAGGAGAGATGATTCTTCTGAATTTGTACCATTACTACCTGTTAAAGATGAGCCATTGTCAGAAGGAGAACAACACCAGTTAAGCGGTGATGACACAAGCGACTCGTGCGGCGCAGAATCAGCAACTAATAAGCCAGTGAAGTCATGGAATCAGAAGGACATGGAGAACGCACTCGAAGCACTCAGGACGCATAACATGAGCCTCACAAAAGCGTCATCGACCTACGGCATACCATCGACAACACTGTGGCAACGTGCACACCGCTTGGGCATAGACACCCCGAAGAAGGAGGGCACTGCCAAGACCTGGAATCAACAACACCTGAGAGCCGCACTGCAAGCGTTGAGATCTGGTGCTATATCCGCTAACAAAGCCAGCAAAGCTTATGGCATACCAAGCAGCACTCTCTACAAAATAGCACGTCGTGAAGGCATCCGCTTGGCTGCTCCATTCAATGCGGCTCCCACCAACTGGTCCTCAGCAGCACTCGCTAGGGCGCTCGCTGACATTAGAACTGGAAGAGCATCAGTGCAAAGAGCATCAGCACATTATGGGATACCTACAGGTACACTATATGGAAGGTGTAAGCGAGAAGGCATAGAGTTGTCCCGCTCTAACCCAACGCCATGGTCTGAAGGCGCAATGGGAGAGGCACTGGAAGCTGTGAGAGTTGGTCAAATGTCCATAAACCAAGCCGCAATACATTACAACCTGCCGTACTCGTCGCTCTATGGGAGATTCAAAAGATGCAAGTTTCAACCGCAGCTCCTCCAGCAGATGCCGCACCAGAACATTCCAGAAGCATCAGAAGAGAGACACCCCGACTACGCACAATTCACGCATACAATTCACCACACACCCGAACCCCTAACGCATCCGTACTCGCATCAATTGCCATTAGAACAATATAATACATCGATGGTTAGCAATAACGATATCTCTAACAATGTTTATAGTGAACAAGCGATGTATTATAATCAAAACGGTATTATCACTAGCTGA
- Protein Sequence
- MPGHGVLAVKSEPLSDEDDSNIGYNGLTSHAVRVKVESENKGILHSVPHLLHLQHVEVLEEVSPAAPSATPVPVSKPPGTQEPALLQTLESQPRNAGSAAILDHSILLRRDDSSEFVPLLPVKDEPLSEGEQHQLSGDDTSDSCGAESATNKPVKSWNQKDMENALEALRTHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGTAKTWNQQHLRAALQALRSGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTNWSSAALARALADIRTGRASVQRASAHYGIPTGTLYGRCKREGIELSRSNPTPWSEGAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKFQPQLLQQMPHQNIPEASEERHPDYAQFTHTIHHTPEPLTHPYSHQLPLEQYNTSMVSNNDISNNVYSEQAMYYNQNGIITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451383; iTF_01452253;
- 90% Identity
- -
- 80% Identity
- -