Tshe012224.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- E2f7
- Assembly
- GCA_902151425.1
- Location
- CABFVX010000746.1:102785-121257[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 2.8e-12 48.6 0.1 11 65 12 70 4 70 0.91 2 2 5.1e-17 1.3e-12 49.7 0.0 3 64 209 304 207 305 0.92
Sequence Information
- Coding Sequence
- ATGGTGCAAGTATCTGTGCTGTATTATCATCTTAGGTTTCTGGAGTTTTACCCTTTGAATGTGGATCCAAGTACTCGAGTCGTCATATCCATTGATAGGTTGGCTGACCTTCTCTGCACCGAGAGGAGACGGGTCTACGACATCATCAACATTCTTGAAAGTCTGCAGATGACTGTTAAACTCTGTAAGAACCGCTATGAATGGTATGGCTGCAAACAGCTTCATGTCACCTTGGCACACCTGAAGGGGTTTGCTGTCAAGTTGGGCCTTCACAAACAGGTCAGGTTTCCAGAAGTGGAAGTTGAGGATTTTATGGAAACTTCTTTGAAGATCGGCGAGGTCTTTGAGGCAGTTGCACAACCTCTTTCTGTTAAGAGCTCAACGCCGCCATATCCTGACACCCTCACAGAGACATCAGCGAGACCTTTATCAGTCATGAGTATTGGTCAACCGCCCATGGATGTTGTCACAGTGACTGTAAGCTCAGAAGACTATATCAGAAGTAAATACCAGCCCATCCTACCCAAAAAGGTTGAGTTGTTGTCCGGCAAAGATTCTGAGGATGTGGGGAGTACAGAGGATTTATGGGGGGACCTTGATATGGAACGAGATATCAGAGACTGCAACTCTCTTGGGGTTCTGTGTCAGAAGTTTGTGATGCTCTTCCTACTGACCAACAAGACGCAGTTGCTGACCCTGGAGCTTGCCTCTAAAATCCTAGTGGGTGGGGTGATGGACCGCCTAGTGAATGATATTACAGGAAGAGCTTATACCCCAGACTCACCACCATTTCAAGGTTCTGTCAAAACCAAGGTTCGACGCTTGTATGACATCGCAAATGTTCTGACTTCACTGCGACTCATCTGCAAGGTACAGGCGTCCAACCTTAAGAAGCCTGCATTCAGATACACAGGGCCCATCGTGGATGCTGCAGGGCTTCCACACTTAGCGACCCTGGTGCAAGTGACTCGACAATCTATGCTGGGCCCCCACCACCCCTCGCTAATGAAGAACCATGGTGTGTTGGTGCTGTTACCTGATTGTCACACTCGCTGGATGGTGGTGCCAAGTCCCACTCAGGAACCAATCAAGTGCTATCACAAGAAGAGAAAACACTTCAGTGGCCCCACAGATATTGCCTTGAAAATGCCAAGAACAAGAAGTGACAATACCCTGACTCAATGTAAGAGTCAGACAAGATCCAGGCACAAATACGCAGATCACTGCTCATTGAATAGCATTCTGAATGTCGCTGAGATGGAACTGATTAAAATGAAAAAGGAAGAAAGTTTACCACAGGACAGGCTTACGTCCCAAGGCGCAGATCACTATATAGCACCGTTTTACACCAAGAAACGGCCATTCTCTAGGCACCATTCTGACTCCTGTGTAACTGAGAGCACTATTCAATATGACATTGAGGCTCCAAATGTAGAGTTGAGCAACAAAACTAGTAACTCAAATATCAATAGCTTGAGTAATGATGATGCTTACAAAATCACTCTACAGCATTCTGTGGCAAAGCTTGATGAACTGGAAATGGGTAATTTTGGTAGCCCTGATAATACAGTGAATTTCATAGATGATTCTATAAAGAATGGGGTGACTAAAATCTATTATGGCCCAAAGAGTGTTGAAAGAAACTCAAAACTAAAAAATGGGGTTGAAACTAATTATTCAGATTATGATGGTTTAGGAAATAAGACAGCAATTATCAAAGGCGAGGACTCAAAATCACAGCCATTACCAGAGAGTTTAAAACCTTCTACTATGGTGAGTATAGGGTCCAATAACATCGACACTAGCGAAAATAATCCACCTGATTGCATCAGCCACCCATCAGGACAGGAGATGCAAATGGTCCGGAAACTCGTCAAACTAACACCTCTTGTATCTCGGCAGAAAGTGTGTTCTTCTAACAGCTACCTTATTTCAAACTCTGAACACATGCCTTCATATTCGGGTAAGATGTTGCTCCTCGATAGGAATGATTCAGAGAATTCAAAATCTGTTAGAGTAGCCAAGCGTCTTACTACAATTGACTTGAGCAATGTGGCTCGAAGTATAGAGTCTAGATCAATGAAACCAAATGATTTGACAGCGAAGAGCATAAAACTGCTTATAAAAGGGAAAACCATAAAACTTACAAAACTGGTGAAAGTTGGAAACATAATGGAACTAATCAACCCTGTGCAATGTGAATTCACTTGA
- Protein Sequence
- MVQVSVLYYHLRFLEFYPLNVDPSTRVVISIDRLADLLCTERRRVYDIINILESLQMTVKLCKNRYEWYGCKQLHVTLAHLKGFAVKLGLHKQVRFPEVEVEDFMETSLKIGEVFEAVAQPLSVKSSTPPYPDTLTETSARPLSVMSIGQPPMDVVTVTVSSEDYIRSKYQPILPKKVELLSGKDSEDVGSTEDLWGDLDMERDIRDCNSLGVLCQKFVMLFLLTNKTQLLTLELASKILVGGVMDRLVNDITGRAYTPDSPPFQGSVKTKVRRLYDIANVLTSLRLICKVQASNLKKPAFRYTGPIVDAAGLPHLATLVQVTRQSMLGPHHPSLMKNHGVLVLLPDCHTRWMVVPSPTQEPIKCYHKKRKHFSGPTDIALKMPRTRSDNTLTQCKSQTRSRHKYADHCSLNSILNVAEMELIKMKKEESLPQDRLTSQGADHYIAPFYTKKRPFSRHHSDSCVTESTIQYDIEAPNVELSNKTSNSNINSLSNDDAYKITLQHSVAKLDELEMGNFGSPDNTVNFIDDSIKNGVTKIYYGPKSVERNSKLKNGVETNYSDYDGLGNKTAIIKGEDSKSQPLPESLKPSTMVSIGSNNIDTSENNPPDCISHPSGQEMQMVRKLVKLTPLVSRQKVCSSNSYLISNSEHMPSYSGKMLLLDRNDSENSKSVRVAKRLTTIDLSNVARSIESRSMKPNDLTAKSIKLLIKGKTIKLTKLVKVGNIMELINPVQCEFT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01446285;
- 90% Identity
- iTF_01446285;
- 80% Identity
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