Tshe010839.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- -
- Assembly
- GCA_902151425.1
- Location
- CABFVX010000637.1:214719-216374[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.28 7.9e+02 2.6 0.0 30 63 8 41 3 43 0.83 2 17 0.013 36 6.9 0.0 26 63 32 69 28 71 0.91 3 17 0.012 34 6.9 0.0 26 63 60 97 55 103 0.91 4 17 0.013 36 6.9 0.0 26 63 88 125 85 127 0.91 5 17 0.013 36 6.9 0.0 26 63 116 153 113 155 0.91 6 17 0.016 46 6.5 0.0 26 63 144 181 141 183 0.90 7 17 0.012 35 6.9 0.0 26 63 172 209 169 218 0.90 8 17 0.016 46 6.5 0.0 26 63 200 237 197 239 0.90 9 17 0.013 36 6.9 0.0 26 63 228 265 224 267 0.91 10 17 0.016 44 6.6 0.1 26 63 256 293 251 302 0.90 11 17 0.013 37 6.8 0.0 26 63 284 321 282 330 0.90 12 17 0.016 46 6.5 0.1 26 63 312 349 309 358 0.90 13 17 0.013 36 6.9 0.0 26 63 340 377 337 379 0.91 14 17 0.016 45 6.6 0.0 26 63 368 405 365 414 0.90 15 17 0.012 35 6.9 0.0 26 63 396 433 391 435 0.91 16 17 0.017 49 6.4 0.0 26 63 424 461 422 463 0.90 17 17 0.036 1e+02 5.4 0.0 26 63 466 503 463 505 0.89
Sequence Information
- Coding Sequence
- atgacccgcaatacacgaacactggactcgccggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccacacactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgctcactggacacgccggtccactcccatgccgtacacactaccgcggcacgcgccacacgaactcccggactcttcagtcgcgagccaagaactgccctcaggctaccgctgagcatgtatttatag
- Protein Sequence
- MTRNTRTLDSPVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHTLDTQVHTLDTQVRSLDTQVRSLDTPVHSHAVHTTAARATRTPGLFSREPRTALRLPLSMYL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450198;
- 90% Identity
- iTF_01450198; iTF_01450200; iTF_01450201; iTF_01450203; iTF_01450207; iTF_01450205; iTF_01450206;
- 80% Identity
- -