Tshe041263.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- -
- Assembly
- GCA_902151425.1
- Location
- CABFVX010005222.1:21511-23397[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.054 1.5e+02 4.9 0.0 29 63 14 48 11 50 0.89 2 17 0.017 48 6.5 0.0 26 63 67 104 62 106 0.90 3 17 0.018 50 6.4 0.0 26 63 123 160 120 162 0.90 4 17 0.014 39 6.8 0.0 26 63 151 188 148 190 0.90 5 17 0.067 1.9e+02 4.6 0.0 26 59 179 212 176 218 0.88 6 17 0.017 47 6.5 0.0 26 63 221 258 215 260 0.90 7 17 0.014 39 6.8 0.0 26 63 249 286 246 288 0.90 8 17 0.018 50 6.4 0.0 26 63 277 314 274 316 0.90 9 17 0.013 37 6.8 0.0 26 63 305 342 301 351 0.90 10 17 0.018 50 6.4 0.0 26 63 333 370 330 372 0.90 11 17 0.013 37 6.8 0.0 26 63 361 398 358 407 0.90 12 17 0.018 50 6.4 0.0 26 63 389 426 386 428 0.90 13 17 0.014 39 6.8 0.0 26 63 417 454 414 456 0.90 14 17 0.017 48 6.5 0.0 26 63 445 482 440 484 0.90 15 17 0.013 37 6.8 0.0 26 63 473 510 469 519 0.90 16 17 0.017 47 6.5 0.0 26 63 501 538 493 540 0.90 17 17 0.012 35 6.9 0.0 26 63 529 566 524 582 0.89
Sequence Information
- Coding Sequence
- atgacccgcaatacacgaacactggactcgccggtccgctcactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccacacactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccacacactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccgaTCCGCActctggacacgccggtccactcccatgccgtacacactaccgcggcacgcgccacacgaactcCCGGACTCTTCAGTCGCGAGCCAAGAACTCCActcaggctaccgctgagcatgtatttatag
- Protein Sequence
- MTRNTRTLDSPVRSLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHTLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHTLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTQVRSLDTPIRTLDTPVHSHAVHTTAARATRTPGLFSREPRTPLRLPLSMYL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450198;
- 90% Identity
- iTF_01450208;
- 80% Identity
- -