Tshe005980.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- -
- Assembly
- GCA_902151425.1
- Location
- CABFVX010000294.1:110630-112537[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.022 61 6.1 0.0 26 63 18 55 12 57 0.90 2 18 0.16 4.4e+02 3.4 0.0 26 59 46 79 43 86 0.85 3 18 0.068 1.9e+02 4.5 0.0 26 59 88 121 85 127 0.88 4 18 0.018 50 6.4 0.0 26 63 130 167 127 169 0.90 5 18 0.019 53 6.3 0.0 26 63 158 195 156 197 0.90 6 18 0.013 38 6.8 0.0 26 63 186 223 180 225 0.90 7 18 0.073 2.1e+02 4.4 0.0 26 59 214 247 212 253 0.89 8 18 0.068 1.9e+02 4.5 0.0 26 59 256 289 253 295 0.88 9 18 0.018 50 6.4 0.0 26 63 298 335 295 337 0.90 10 18 0.015 41 6.7 0.0 26 63 326 363 324 365 0.90 11 18 0.019 53 6.3 0.0 26 63 354 391 352 393 0.90 12 18 0.014 39 6.8 0.0 26 63 382 419 379 421 0.90 13 18 0.018 50 6.4 0.0 26 63 410 447 407 449 0.90 14 18 0.015 41 6.7 0.0 26 63 438 475 436 477 0.90 15 18 0.018 50 6.4 0.0 26 63 466 503 463 505 0.90 16 18 0.013 38 6.8 0.0 26 63 494 531 491 540 0.90 17 18 0.017 49 6.4 0.0 26 63 522 559 517 561 0.90 18 18 0.014 39 6.8 0.0 26 63 550 587 547 589 0.90
Sequence Information
- Coding Sequence
- atgacccgcaatacacgaacactggactcgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccactcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccacacactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgcacactggacacgccggtccactcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgctcactggacacgccggtccactcccatgccgtacacactaccgcggcacgcgccacacgaactcccggactcttcagtcgcgagccaagaactgccctgaggctaccgctgagcttgtatttatag
- Protein Sequence
- MTRNTRTLDSPVRSLDTQVHTLDTQVHSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHTLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHTLDTQVRSLDTQVRTLDTPVHSLDTQVHTLDTQVRSLDTQVRSLDTPVHSHAVHTTAARATRTPGLFSREPRTALRLPLSLYL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450198;
- 90% Identity
- iTF_01450208;
- 80% Identity
- -