Basic Information

Insect: Timema monikensis
Gene Symbol: -
Assembly: GCA_902151445.1
Location: CABFVZ010008773.1:2121-5345[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0026 0.55 12.9 2.1 1 23 107 130 107 131 0.97

2 18 0.12 24 7.7 0.7 1 23 160 182 160 182 0.98

3 18 1.8e-06 0.00037 22.8 3.7 1 23 188 210 188 210 0.98

4 18 9.6e-05 0.02 17.4 0.5 1 23 213 235 213 235 0.98

5 18 0.0015 0.32 13.6 1.2 1 23 599 621 599 621 0.96

6 18 4.8e-06 0.00099 21.5 0.8 1 23 629 651 629 651 0.97

7 18 2.5 5.1e+02 3.5 1.2 2 23 659 681 658 681 0.93

8 18 0.00022 0.045 16.3 0.1 2 23 714 736 713 736 0.96

9 18 4.3e-06 0.00089 21.7 3.2 1 23 749 771 749 771 0.99

10 18 4.7 9.8e+02 2.6 1.6 1 23 790 812 790 812 0.94

11 18 0.0002 0.041 16.4 0.3 3 23 820 841 819 841 0.97

12 18 0.0094 1.9 11.1 2.4 3 23 846 866 845 866 0.97

13 18 0.00036 0.075 15.6 0.5 3 23 876 896 874 896 0.95

14 18 1.4 2.8e+02 4.3 0.1 1 23 902 924 902 924 0.90

15 18 4.9e-06 0.001 21.5 1.2 1 23 930 952 930 952 0.97

16 18 0.00013 0.026 17.0 5.4 1 23 958 981 958 981 0.98

17 18 1e-05 0.0021 20.5 1.1 1 23 987 1009 987 1009 0.96

18 18 0.00091 0.19 14.3 1.0 1 23 1015 1038 1015 1038 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0026	0.55	12.9	2.1	1	23	107	130	107	131	0.97
2	18	0.12	24	7.7	0.7	1	23	160	182	160	182	0.98
3	18	1.8e-06	0.00037	22.8	3.7	1	23	188	210	188	210	0.98
4	18	9.6e-05	0.02	17.4	0.5	1	23	213	235	213	235	0.98
5	18	0.0015	0.32	13.6	1.2	1	23	599	621	599	621	0.96
6	18	4.8e-06	0.00099	21.5	0.8	1	23	629	651	629	651	0.97
7	18	2.5	5.1e+02	3.5	1.2	2	23	659	681	658	681	0.93
8	18	0.00022	0.045	16.3	0.1	2	23	714	736	713	736	0.96
9	18	4.3e-06	0.00089	21.7	3.2	1	23	749	771	749	771	0.99
10	18	4.7	9.8e+02	2.6	1.6	1	23	790	812	790	812	0.94
11	18	0.0002	0.041	16.4	0.3	3	23	820	841	819	841	0.97
12	18	0.0094	1.9	11.1	2.4	3	23	846	866	845	866	0.97
13	18	0.00036	0.075	15.6	0.5	3	23	876	896	874	896	0.95
14	18	1.4	2.8e+02	4.3	0.1	1	23	902	924	902	924	0.90
15	18	4.9e-06	0.001	21.5	1.2	1	23	930	952	930	952	0.97
16	18	0.00013	0.026	17.0	5.4	1	23	958	981	958	981	0.98
17	18	1e-05	0.0021	20.5	1.1	1	23	987	1009	987	1009	0.96
18	18	0.00091	0.19	14.3	1.0	1	23	1015	1038	1015	1038	0.94

Sequence Information

Coding Sequence: ATGCTTGTGTTTCAGGTGACACACATACCTGCATCACCACCTGAGAACCTTGTGGACCTCACGGGGTCCTCCAGTCAGTCCGACATCAAAATAGAGAGAGTCATGTCGATGGTCACTGAAACTACCAATACAAACTCAAGGGATAAAGTTGCCAAGAGCACTCTGGGAGCCTCTAACAGGCAGAACACCGCCATGACCTTGGACGTGGACGTGTCCGACCCAGACGCGACGATGTACCGCTGCACCTCGTGTAGATACAAGACCCTCCACATGCTCTCATTTGTGCAGCACCTCAAGACACACCCCAAGAAGACCTACTACAAGTGTTCCGAGTGCTCACAGCAGTTTGAGAAGCGGAGCGACGCCCAACAACACATTACAACTGTCCACCACTGCAGTGATGTTGAGTTTGATGACGACGCCTCCACACCCGTCAAGAAAGTCCCAGAGGCACCCCCGACCCAGAAAAGAAAGGCGTTTGAGTGTGATATCTGCAGCTACCGCGACACAGACAAAGATCAGTTTGACAAACACTTGTTGTCTCACACCCAACCGACCTTTTATGAGTGCAGCATTTGTTCTAAGAGATTCAAAAGCAAGCAGTACCTACAGAAACACATGAAGAACCACAAGATATACAAATGTGGGATCTGCGGTTTAACATTCAGGGTGAAGCTGGACCTTCTAAAACACTTCAAGGTTCACAAGAGTGATGAGCCAGCTGAGGATCCTCCTATGGAGGAGACCACATCATCCTCACTGGTTGAGGAGAAGGAAAACATGGAGCAGGAGGAAGCATCGACACCCAAACGTCTAAAGCTTCATGAAGATTACGACCGGGTAGAGCAGATGCTGGAGATGATGCATTCCGGCGCCTCTGTGCTCGAAGACCAGGAGCTGAAACAGACCGGTGGTGATACTATGGAGCAGTCTGGTGTAGAACACTCGGTGATGGATAGTCAAGACGATGTGGACAAAGTTGTAGAGAGCATCTCAGAACACTTGAACGGTGAGAAAGAGGAAGAAAACTTGGATGCTGGAGAAAGTTTGGGTGAGCACGAACCGAAGACGGTCGATGACTCTCTAGAAAGTGCCGAAGAACGTGTTGAAGACGAGAAGGAGGAGGATAGCTCAGATGATCAAACTGTTACTGAGAAAAGATTCGTTAGCTTGGAAGAAGTGAAAAATATTGCAGACAGTTTTGACAGTTTGGACGACGTGGCCGAGAGCTCTGAGTTGATCCACCAAGTTGATCAAGATGTTTTGAATGACAAACTAGAAAATGGCACCGTCAAGTTGGAAGAACCGAAGATTGAACTGGACGTTGATGTGAATAAAGAGGCAGACAAGATAGTAAGTGAAGCTCTTGGAGTGGATTTGAACGAATATATCAGTAATGACATGAACATGGACATTAGCGCATCGTCCGACAAACCAGAGAACAGCCTGCCCTCACTGGTGTCTGAAAACTCTGGGTCACTACCAGAAATGGACGATAACACTAGGGAGGAGGCCATAGAGAAGGACCACCTCACAGATGTTAATGAACCAATTACAGGTATGACACAATCACCCGTTATTAATGCTAGCAAGGAGATGAAGTCAAAACTAGTTGACAATATGTTTGATGAACTTTTCTGGCACTGTCCCAATGAGTCATCTTTACCATTTCAGGTTGATGCCACTGGCCCTGCCCCGGATTTTGAGGTGGAGATACGTGGAACCGGTCTTCCGTCTCTCTCCACCGCTGCAGAGCAACACACTCCGAACCTGGCCACTGCAAAGAAAAGAGTTTACCTATGTTCGGTGTGTGGGCTGAGGTCACGCTCAAAGAATCAGATCCGGAGGCATCTAAGGAGCCACGTCGCGCTGAGGAAGAAAAGTTTCGTATGCCGTGTCTGCAGCAAGATTTTCACCACCCAGGGTAACTTGACCCGTCATTTAGTCAAACATTCACCTGAGAACAAGAGCGTCCCATGTGACTTGTGTGATGGTTTATTCCATGACAGACTTCACTTAAAAGAACACACAGGTACCACCCACTCGGGAAGACACAAGTGCTCGTTCTGCAATATTTTACTGACTAGCAGAAAAGCTCGCTGGTTTCACGAGAAGACTCATCCTGAGCGGCTCGTGCAAAAGTGTGACGATTGCGGAGAGGTGTTTGAAACCGAGGTGAAACTCAAGATTCACAAGGAGACCGTCCATGCTGATGCCACATTTGAGCTCACAGAGGGTAAGATCTACAAGTGCCACCTATGTGGTAAGGTTGTATCAACATACTTCAACCTCAGGAGACACCTGCAGAGTCATGAGGGTGATGTAGGGCAGACTAATTGCAACATACGCCTCACAGATCCCAATAACTACAACTGTTCGTTCTGCCTTCTAGTGTTTCCCAGTAAGCAATTGTGTAAGATTCATGAGGCAACCCATCCTGAGAAGCTATTCCATGGGTGCGTTGATTGTGGCAAGCGCTTTGCAACAAATGAGCGACTAGAAAGGCACAAACAAGTGATGCATCGAGACCCCCACTGCAAGTACTGCGGGAGGTACTATGGAGACCTGAAAAAGCTGTTTGCCCACGAGCGTCGGCATGAGAGGTACAAAAAGATGTCTTTGGACTGTACACAatgtgataaaacatttaagacTCCCACGGGACTCAAGTTCCACATGGCTGTGCACACGGGAGAATACGCATTCTACTGCGAGATCTGTGGCCAAGGCAGGCATTCGGAGGTGGTTCTTGCAGAGCACGTGGCAACTCACACTAAAGAGATCCGTTACATTTGCGACTATTGCGGTAAGAAGTTCTCTTCCAACAGCACCTACCGGATACACCGCCTCTGGCACAAGAACCCCTTTCCTTATAAATGCACCACATGTGGGAAGTGCTTCAAACATACATCGGTACTTGCTGTCCATAAACGACGAGTGCACACTGGAGAGCGCCCTCACAAGTGCCCTTATTGCCCATTATCGTTCACTGTGTCGAGTACGTTACGCAAGCACGTTATCCTACACACTCAGCAGTTCCCACACAACTGCACTGCCTGTGGGAAGGGGTACACTACTAGGACTAAGTTGGCTCGCCATCTTGCCAAGGCTCACAGCGACAACGAAATGCTCAACAATCTTGGTCACCACTATGAGTACAAGATGGCACTGCGGCCCAGTGAGGTCTCACCCTTGGTGGAACGACTTGAATGCTCTGGTGAGTGA
Protein Sequence: MLVFQVTHIPASPPENLVDLTGSSSQSDIKIERVMSMVTETTNTNSRDKVAKSTLGASNRQNTAMTLDVDVSDPDATMYRCTSCRYKTLHMLSFVQHLKTHPKKTYYKCSECSQQFEKRSDAQQHITTVHHCSDVEFDDDASTPVKKVPEAPPTQKRKAFECDICSYRDTDKDQFDKHLLSHTQPTFYECSICSKRFKSKQYLQKHMKNHKIYKCGICGLTFRVKLDLLKHFKVHKSDEPAEDPPMEETTSSSLVEEKENMEQEEASTPKRLKLHEDYDRVEQMLEMMHSGASVLEDQELKQTGGDTMEQSGVEHSVMDSQDDVDKVVESISEHLNGEKEEENLDAGESLGEHEPKTVDDSLESAEERVEDEKEEDSSDDQTVTEKRFVSLEEVKNIADSFDSLDDVAESSELIHQVDQDVLNDKLENGTVKLEEPKIELDVDVNKEADKIVSEALGVDLNEYISNDMNMDISASSDKPENSLPSLVSENSGSLPEMDDNTREEAIEKDHLTDVNEPITGMTQSPVINASKEMKSKLVDNMFDELFWHCPNESSLPFQVDATGPAPDFEVEIRGTGLPSLSTAAEQHTPNLATAKKRVYLCSVCGLRSRSKNQIRRHLRSHVALRKKSFVCRVCSKIFTTQGNLTRHLVKHSPENKSVPCDLCDGLFHDRLHLKEHTGTTHSGRHKCSFCNILLTSRKARWFHEKTHPERLVQKCDDCGEVFETEVKLKIHKETVHADATFELTEGKIYKCHLCGKVVSTYFNLRRHLQSHEGDVGQTNCNIRLTDPNNYNCSFCLLVFPSKQLCKIHEATHPEKLFHGCVDCGKRFATNERLERHKQVMHRDPHCKYCGRYYGDLKKLFAHERRHERYKKMSLDCTQCDKTFKTPTGLKFHMAVHTGEYAFYCEICGQGRHSEVVLAEHVATHTKEIRYICDYCGKKFSSNSTYRIHRLWHKNPFPYKCTTCGKCFKHTSVLAVHKRRVHTGERPHKCPYCPLSFTVSSTLRKHVILHTQQFPHNCTACGKGYTTRTKLARHLAKAHSDNEMLNNLGHHYEYKMALRPSEVSPLVERLECSGE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449831;
90% Identity: iTF_01445018;
80% Identity: -