Tmon016924.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- lilli
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010000574.1:224201-237657[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-08 0.002 19.6 0.0 44 116 17 90 13 102 0.70 2 2 9.7e-09 0.00079 21.0 0.0 324 381 146 202 140 212 0.89
Sequence Information
- Coding Sequence
- ATGGTGAGAAGGGCGAAACTGCGCTGGTGGGTGACACCGTCGTCCACCGACGTGGTGACGCACCAAATTCAGAGGCGCCTGGGCAACTACGACATTGTCAAGGACCTGTTCGAGGACGTCCCGAAGTTGCTGGGAATAGACTCCAACCATCCTCCGGCCAGTCCCGCCCCCTTCCCGTCCCAGGGCTCCGCCGCCTCCCGCGCTCAGGGCGAGTTCAAGAAGCCGTCCGCCGCCCACCACAACAACCATCACGGCCACCACAGTGCTCCCCGGGGTGGATTCGTGAAGCCGACGGACGGTAAACCGCCCTATGGGGGCCGGGGCGGGTACCCCGGCCAGCCCGTGAAGCACGGGGTCCCCGCGAGCAACGATCATCGGGCCAATGGTATCGTTCCACCCAAGGGGCCACCGGTCGGAGGCAGCAGGATTCATCAGACCAGCAGGAGTTTACCCAGGCTTCATGTCGGACAGGGGCAGAGGGATTCTTTGAGTGGCGGCCAGCCGGAGCTCGAGAACATCCTCAAGGAGATGAAGTCTGTGATGGTGACTCCCCTGACTGGAATAGCCACCCCCCGCAAGGAGCCGGAGAGCAAGTTCACTTTCAACCCTCACCTGGCTGGCtatATGAATGGCATGCCTCCTCCTGTTCAAGAACATAGAAGCCGTAAGTTGCTATCTACTCTTTGGATATtatga
- Protein Sequence
- MVRRAKLRWWVTPSSTDVVTHQIQRRLGNYDIVKDLFEDVPKLLGIDSNHPPASPAPFPSQGSAASRAQGEFKKPSAAHHNNHHGHHSAPRGGFVKPTDGKPPYGGRGGYPGQPVKHGVPASNDHRANGIVPPKGPPVGGSRIHQTSRSLPRLHVGQGQRDSLSGGQPELENILKEMKSVMVTPLTGIATPRKEPESKFTFNPHLAGYMNGMPPPVQEHRSRKLLSTLWIL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444776;
- 90% Identity
- iTF_01444776;
- 80% Identity
- -