Tbar005611.1
Basic Information
- Insect
- Timema bartmani
- Gene Symbol
- lilli
- Assembly
- GCA_902151455.1
- Location
- CABFWB010000232.1:161092-171900[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-08 0.0015 20.2 0.0 44 116 8 81 5 93 0.69 2 2 1.6e-08 0.0014 20.2 0.0 324 381 137 193 131 205 0.89
Sequence Information
- Coding Sequence
- ATGGTGACACCGTCGTCCACCGACGTGGTGACGCACCAAATTCAGAGGCGCCTGGGCAACTACGACATTGTCAAGGACCTGTTCGAGGACGTCCCGAAGTTGCTGGGAATAGACTCCAACCATCCTCCGGCCAGTCCCGCCCCCTTCCCGTCCCAGGCCTCCGCCGCCTCCCGCGCTCAGGGCGAGTTCAAGAAGCCGTCCGCCGCCCACCACAACAACCATCACGGCCACCACAGCGCTCCCCGGGGTGGGTTCGTGAAGCCGACGGACGGTAAACCGCCCTATGGGGGCCGGGGCGGGTACCCCGGCCAGCCCGTGAAGCACGGGGTCCCCGCGAGCAACGACCATCGGGCCAATGGTATCGTTCCACCCAAGGGGCCACCAGTCGGGGGCAGCAGGATTCATCAGACCAGCAGGAGTTTACCCAGGCTTCATGTCGGACAGGGGCAGAGGGATTCTTTGAGTGGCGGACAGCCGGAGCTCGAGAACATCCTCAAGGAGATGAAGTCTGTGATGGTGACTCCCCTGACTGGAATAGCCACCCCTCGCAAGGAGCCGGAGAGCAAGTTCATTTTCAACCCTCACCTGGCTGGCTATATGAATGGTATGCCTCCTCCTGCTCAAGAACATAGAAGCCGTAAGTTGCTATCTACTCTTTGGATATtatga
- Protein Sequence
- MVTPSSTDVVTHQIQRRLGNYDIVKDLFEDVPKLLGIDSNHPPASPAPFPSQASAASRAQGEFKKPSAAHHNNHHGHHSAPRGGFVKPTDGKPPYGGRGGYPGQPVKHGVPASNDHRANGIVPPKGPPVGGSRIHQTSRSLPRLHVGQGQRDSLSGGQPELENILKEMKSVMVTPLTGIATPRKEPESKFIFNPHLAGYMNGMPPPAQEHRSRKLLSTLWIL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01448562;
- 90% Identity
- iTF_01448562;
- 80% Identity
- -