Basic Information

Insect: Timema douglasi
Gene Symbol: RREB1
Assembly: GCA_901482245.1
Location: CABEEJ010008365.1:9775-23147[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00025 0.061 16.1 0.4 1 23 106 128 106 128 0.97

2 16 8.3e-05 0.02 17.6 0.1 1 23 145 167 145 167 0.98

3 16 9.7e-05 0.023 17.4 2.0 1 23 173 195 173 195 0.97

4 16 2.3 5.4e+02 3.6 0.1 1 23 321 345 321 345 0.82

5 16 0.13 30 7.6 1.4 2 22 351 371 351 374 0.89

6 16 5.9 1.4e+03 2.3 0.3 1 20 435 454 435 456 0.80

7 16 0.016 3.8 10.4 0.1 1 23 634 656 634 656 0.97

8 16 0.021 4.9 10.1 0.3 1 23 664 686 664 686 0.99

9 16 0.0021 0.5 13.2 2.3 1 23 692 715 692 715 0.97

10 16 0.0012 0.29 13.9 2.1 1 23 860 883 860 883 0.95

11 16 0.0047 1.1 12.1 0.3 3 23 1177 1197 1176 1197 0.98

12 16 0.024 5.8 9.8 5.1 1 23 1203 1226 1203 1226 0.97

13 16 0.0019 0.44 13.4 2.1 1 23 1268 1292 1268 1292 0.96

14 16 0.69 1.6e+02 5.3 1.3 1 23 1406 1428 1406 1429 0.95

15 16 0.0048 1.1 12.1 0.5 3 23 1486 1506 1484 1506 0.96

16 16 0.011 2.6 10.9 5.9 1 23 1512 1534 1512 1534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00025	0.061	16.1	0.4	1	23	106	128	106	128	0.97
2	16	8.3e-05	0.02	17.6	0.1	1	23	145	167	145	167	0.98
3	16	9.7e-05	0.023	17.4	2.0	1	23	173	195	173	195	0.97
4	16	2.3	5.4e+02	3.6	0.1	1	23	321	345	321	345	0.82
5	16	0.13	30	7.6	1.4	2	22	351	371	351	374	0.89
6	16	5.9	1.4e+03	2.3	0.3	1	20	435	454	435	456	0.80
7	16	0.016	3.8	10.4	0.1	1	23	634	656	634	656	0.97
8	16	0.021	4.9	10.1	0.3	1	23	664	686	664	686	0.99
9	16	0.0021	0.5	13.2	2.3	1	23	692	715	692	715	0.97
10	16	0.0012	0.29	13.9	2.1	1	23	860	883	860	883	0.95
11	16	0.0047	1.1	12.1	0.3	3	23	1177	1197	1176	1197	0.98
12	16	0.024	5.8	9.8	5.1	1	23	1203	1226	1203	1226	0.97
13	16	0.0019	0.44	13.4	2.1	1	23	1268	1292	1268	1292	0.96
14	16	0.69	1.6e+02	5.3	1.3	1	23	1406	1428	1406	1429	0.95
15	16	0.0048	1.1	12.1	0.5	3	23	1486	1506	1484	1506	0.96
16	16	0.011	2.6	10.9	5.9	1	23	1512	1534	1512	1534	0.98

Sequence Information

Coding Sequence: ATGGGAAATGGAAGCATAGATCAAGAATCCTCTCAGACTGATAACAGCAAGTATGTAAGAAAACAAGAACAAGACACGGGAAGAAAGTCCTGTGAATCAGACATCGATACTTTAGAACATGACGACGAATGTGAAAAGCTACCCAATAACACCACTAAGGAATCCATAGCAATAAACAAGAGACTCAAAGATATAACTGAAGCAaaaaatgataatgataaaGAGAGTGATAGCTTGGATATGCCAGAAAATTGTTCTCTTGATTGCTTGTCCTCAAACAGTGAAAATAGTCAAATGGATGATTCAGATATGAAATTTGCCTGTCCAATCTGTGACATGATTCTATCCTCCCAGCATGAGTTTACTTTACACATTCGCTCACACAACAATAATTCAGAGTCATTAGTTTATCCTCTCGCGTGCTTGAAGAACTACACTTGCCGTATTTGTGGCAAAGGGCTAAGTTCATCCAGTTCATTGGATCGTCATGTGTTAGTCCACTCTGGTGAGCGGCCATTTAAATGCATTACTTGTGGTGTTGCTTTTACAACAAATGGGAACATGCATAGGCATATGAGGACCCACAATCCCTCCCATGTGGGGGATAGTTTGGTTTTGAATTCCAAATGTGAATACACCAGTTGTGAGAGTGACGGTAGTTCTGATAGTGTAGGATCAAGCAATAGCATATCTGCCAATCCAAGGAAAAGTCCTCATTTAGACACTTCTCAAGCTGGACCTGTAAAGAGGCGAAGAGTTGATAGTGACGGTTTTCTTATTGAATCTAACAACAACACCAATAAACTTTCTGAGCCATTGTTATCATTAAAATCGCATGTAGAGAATGGAATAAAGAGAAAGGCTCCCGATTTGCTAACACCCTCTGACTATGAAGGAGAAGAAATTGTTAGGAGGAACGTAAACCCGGTTACATATCATCAAAATGAATTTGTTCAACAATTCCAATGTCCTGTTTGTAAAAGAATTGATTTTGCATCGTTATATGTTTTAGAGACACATCTTGAAGAAAGGCATCCTGATTATAAGGCCACGTGTTATCAGTGcgacttaatttttaaaaatcatcgAGCTTTAAATCTTCATCGCTTCATGGCCCAACATGATAATAGTGAAGAACACAACATTGTAAGGGCTAAGAAGAGTAAACATATTAATAGAGCATCCTCTGTCTTGGGTTTCAGAGACCTAACATTTGTAGACTTTTCTAGTGAAAAGTTCCCATACATTGCAAAAGTAATGTGTGAACAAAGTATGCATAGAGCAACTAGTGCCTTTCATAAGTTTCAATGCCAAAAGTGTGCAAGAGCTTTTCCATGTGGTAGTGCCTTGAGCATTCACCGTCAGGCGTGCTTGACTTCACGTGAAAAAATGGATTTCAACCACCCATATGACCCTGATAGTTTTCATGGAGATGAATTTCCATCAAGTGACTGTGATACTCCAACAGATCTGAGCAGCAAAAAGAAACCTAGACAGAATTTACGATACGAAAAATCTTCAGATTGTGAGTCTGAAGAAGAACAAAAAAGAGAAGATTTTTTTGCCCATTTAGATCTGCAGACTAAATCAGTGTGTTTATCATCCCCATTGTCTTCAGAAGATTTCCGTAGGGATGAGAGGTTTGAAAATGATTCTTATTTTAACTCTGTCAATGGTAATAAATGTGATAATGGAAAAGATCTTGCAGATATACAGAGTATTATATCTGTCACATCAGCAGGAGGGTTGCTTAATGACTTATCAAAATCTCCACAACCCCATGGAAATGATATAACACCTCCAGACTCTGGGATAAAATCCTCAGATTCAGGAACAGGGGAAGAAGAACAGCAGGATTGTTTTGCATCAGAGTTTCGTAAAATGAAGTTAAAAGGGGAATTTCCATGTCGTGTATGTACTCTCGTGTTTCCAAATCTACGTGCTCTCAAAGGTCACAATAGAGTTCATCTTACAGCAAGCTCAGGACTGTATCGATGTAACATGTGCCCATATTCCAATATCGATAAAGGAATCCTAGTGCGACACATGCGAACTCATAACGGGGACCGACCATATGAATGTGCTCTCTGCAATTACGCATTTACTACCAAGGCAAATTGTGAAAGGCATCTGCGTAACAGGCACTCAAAACTTTCTCGAGATGACgtaaaaaattcaattatatatcATCCTTCAGAAGATCCTATAAATGACCCTGAAATTCAGCCAAAGCTAAACACTCGAGAAGATGTGAAGAGATCTTTAGTTTTCAGCACCAACTTGTCAACTGATGAAACCAACAACATGGATCTCTCCAACCAAAGCTTTACAGAGGAACATCAAAAAGATGGTCAAGCAAAGTTGtgtgaaatttcaaataaactctCATTTACTGATAATGAACCAAATACTATAGGAAAACCTACCTTGGATGATCACAATGAAGAAATAAATCATACACCAACATTTTCTGTTAATGCTCTACCAAAAACTCTAGTCCCTATACCAAATATATCTGATTCTAACAACAAACAGATTCGTCCGTGGAAGCAGAGAAGGTATCGAACTGAGAGGCCATTTGCATGTGAACATTGTTCTGCACGATTCACTCTTCGCTCTAATATGGAGAGGCACATAAAACAACAACATCCTCAGTTCTGGAGCCAACGTCAGAGAAACAGTTCTGGATCTGTTGGACGCAGAAGTCATCCAGCAGCAGTGCTGACTTCTGTCAACCAGGTTTTGACTACTCAACAGTCTCAAGACTCTAGGAGTTCAGTGGATAGTTTCAGTCAAACTTCATCAAAAGGATCtcatttttctataaatgttgTTTCAAGTGACCCAACAGATTATAGATCCATGCCTTTACTTGAATGGAGGGGTAGTGAAAAGATGCCAAAGATAGAAGAATCCTTCACCGAGGAAGTGTTGGATAAAATTCACAAAACCAAAGATATATCTAGTGTTGGTGCtatcaacaatttaaataatatagcctTTATTTCTGAGGAAGTAAGGTTTGCGATAGCTCAGCAGTTAAAATCAAAACTACACCAGCCTCCTGCAGTACCTCTAGGAGAGCTACCTGGCATAAAATGTGAGGCACGTGGAGACATGGATGAAGAAGATGAAAATGATGGATTGGTGATTGATGAAGAAAAAGGTGAAATTGAAGAAGGGAATGAAGGTAACCAGAAAGGAGTACAAACCAAAGAACAACAGAATGGAAGTAGGGATGAAGGAGTAGTGGATCTGGCAAGTGTGTCAAGACTTTTGGACAACGCCACTACACAGAATCAAGCATTCCAGCAGTATTTCCAGGGAACACAAGATGGTGATGGGGAGGAGGAAGGAACTGAATACGGAAGGGAAGAAGCTAGTGAGGATGATGAAGAAGGACTAGTAGCTGGAAGCAATAGTGAAGGAAACAACTCGGGCAGTGACGAAAACAGATCTGAGTCAGATATCAATCCAGGCACAGAAAAAAAGAAGAGCGCGTACTCCCTGGCACCCAATAGAGTCGCGTGCCCATACTGCCTTCGCAAATTCCCGTGGTCCTCATCTCTGCGTCGACATGTCTTGACACATACAGGACAGAAGCCATACAAGTGTCCACATTGTCCCCTACTGTTCACCACAAAGTCGAACTGTGACCGTCACTTGCTCAGGAAACATGGCAGCACCTCAGCCACAACTTCTAATAACAGTAGCAATGGTGTTGAGACGTCTCAAGGAAACGGGACCCCCACAGGAGCATCCAATCCAAGCTACACCATGAGAAACGTTCCAGAGAGGCCTTTCAAGTGCAATTTCTGTCCGAGTTCTACATTCTCGACACAGAGCAACTTGAAGAAACACGTCGCCACCAAGCACGGTAGCCACTCTTGCCCGACAAGTCCTGCAGCAGCAGCTACCACTAGGAACACGTGTTCCTCTGGGGATGAGACCTATCACCAAACAACCAGAACAGTTGATAGTCGTGCTGGTGGAGGAGATGATAGCCATGATAGTGTAAATGAAGAGGTATCAGATCCTGATCCCGTAAACAGAACCACTGAGCTTGGTGAAGGGGACATCGAGAGCGTGCCTGGTCATCCTGCAATAGATCTGAGAACTAGCATTCCTTCCCTTGGAGCTACACACGAGAGTGTTGTGCCAAAGACTTTAATAGCGCTCGAAACTCATGGAGCAACCACATCTTCGGAGCTACCTTTTAAATGCCACTTGTGTGAAGGGAGTTACGCAGAAAGGCAGGAAGCTTTGGACCATATCCGGGAACATCACCCCACAGAGTTTGATCTGCTCGTGACTAAAGGAGCACTGGAGGTATCTACACATGAGGAGAATAACGGGAATAGTCACATCACGTCACAGGAAGAAGGGAATGGAGGGGAAGAAAATTTGGAACAACTCAGAGGGAAGTTTCCAGACTATGCTAACAGAAAGGTAATGTGTGCATTCTGCCTGCGTCGATTCTGGTCCGCCGAAGACTTGCGGCGACACATGCGCACACACACGGGTGAGCGGCCCTTCTCATGTGACATCTGTCGACGGCGCTTTACTCTGAAACATAGCATGCTGCGCCACCGTAAGAAACATAGCATCGTGTCTCCCAACTCTGAAGATGTCTCCGTCGTAAGTGGAGACGAAGACAACACTCAAACACCCCTCACACCTTCTCGCTCACTTTCAGACTCCTCAATCAAAACTCTTGAAAAACATGGTTTAAATCTAACAAATCACAACAATAACACCATTTCCTCGACAAAGAGTTGTACTTGGGAGGGCAATAAGAATGACTTGACACTTTCAGCAGCACACATTCTAAGTTCAAGGTTGTTATTAGAAAGAAAAGATGACGCTGTTAGTACAGAGGAAGATACTGACTTGATCGGGAATCTTCTGGGGATACAGGACCGGTCCATCATCGACAAAGTTCTCTTGTCCAAGTCTGCCGATGATGCAGCTAAGTTGTTGGGTGTAAGGAACGCAAGTCACGAGTAG
Protein Sequence: MGNGSIDQESSQTDNSKYVRKQEQDTGRKSCESDIDTLEHDDECEKLPNNTTKESIAINKRLKDITEAKNDNDKESDSLDMPENCSLDCLSSNSENSQMDDSDMKFACPICDMILSSQHEFTLHIRSHNNNSESLVYPLACLKNYTCRICGKGLSSSSSLDRHVLVHSGERPFKCITCGVAFTTNGNMHRHMRTHNPSHVGDSLVLNSKCEYTSCESDGSSDSVGSSNSISANPRKSPHLDTSQAGPVKRRRVDSDGFLIESNNNTNKLSEPLLSLKSHVENGIKRKAPDLLTPSDYEGEEIVRRNVNPVTYHQNEFVQQFQCPVCKRIDFASLYVLETHLEERHPDYKATCYQCDLIFKNHRALNLHRFMAQHDNSEEHNIVRAKKSKHINRASSVLGFRDLTFVDFSSEKFPYIAKVMCEQSMHRATSAFHKFQCQKCARAFPCGSALSIHRQACLTSREKMDFNHPYDPDSFHGDEFPSSDCDTPTDLSSKKKPRQNLRYEKSSDCESEEEQKREDFFAHLDLQTKSVCLSSPLSSEDFRRDERFENDSYFNSVNGNKCDNGKDLADIQSIISVTSAGGLLNDLSKSPQPHGNDITPPDSGIKSSDSGTGEEEQQDCFASEFRKMKLKGEFPCRVCTLVFPNLRALKGHNRVHLTASSGLYRCNMCPYSNIDKGILVRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKLSRDDVKNSIIYHPSEDPINDPEIQPKLNTREDVKRSLVFSTNLSTDETNNMDLSNQSFTEEHQKDGQAKLCEISNKLSFTDNEPNTIGKPTLDDHNEEINHTPTFSVNALPKTLVPIPNISDSNNKQIRPWKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWSQRQRNSSGSVGRRSHPAAVLTSVNQVLTTQQSQDSRSSVDSFSQTSSKGSHFSINVVSSDPTDYRSMPLLEWRGSEKMPKIEESFTEEVLDKIHKTKDISSVGAINNLNNIAFISEEVRFAIAQQLKSKLHQPPAVPLGELPGIKCEARGDMDEEDENDGLVIDEEKGEIEEGNEGNQKGVQTKEQQNGSRDEGVVDLASVSRLLDNATTQNQAFQQYFQGTQDGDGEEEGTEYGREEASEDDEEGLVAGSNSEGNNSGSDENRSESDINPGTEKKKSAYSLAPNRVACPYCLRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGSTSATTSNNSSNGVETSQGNGTPTGASNPSYTMRNVPERPFKCNFCPSSTFSTQSNLKKHVATKHGSHSCPTSPAAAATTRNTCSSGDETYHQTTRTVDSRAGGGDDSHDSVNEEVSDPDPVNRTTELGEGDIESVPGHPAIDLRTSIPSLGATHESVVPKTLIALETHGATTSSELPFKCHLCEGSYAERQEALDHIREHHPTEFDLLVTKGALEVSTHEENNGNSHITSQEEGNGGEENLEQLRGKFPDYANRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHSIVSPNSEDVSVVSGDEDNTQTPLTPSRSLSDSSIKTLEKHGLNLTNHNNNTISSTKSCTWEGNKNDLTLSAAHILSSRLLLERKDDAVSTEEDTDLIGNLLGIQDRSIIDKVLLSKSADDAAKLLGVRNASHE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01445928;
90% Identity: iTF_01450887;
80% Identity: -