Basic Information

Insect: Timema douglasi
Gene Symbol: -
Assembly: GCA_901482245.1
Location: CABEEJ010000541.1:215176-221431[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.3 2.2e+03 1.7 2.8 1 23 629 652 629 652 0.85

2 14 0.083 20 8.2 0.4 3 23 764 785 763 785 0.96

3 14 0.02 4.7 10.1 0.4 1 23 793 815 793 815 0.98

4 14 0.00012 0.029 17.1 3.3 2 23 818 839 817 839 0.97

5 14 0.00018 0.042 16.6 1.0 1 23 845 867 845 867 0.98

6 14 3.9e-06 0.00092 21.8 1.3 2 23 874 896 873 896 0.96

7 14 0.14 33 7.5 2.6 5 23 909 927 908 927 0.96

8 14 0.00022 0.052 16.3 1.6 2 23 933 955 932 955 0.96

9 14 0.041 9.9 9.1 0.0 2 23 971 991 970 991 0.97

10 14 9.3e-06 0.0022 20.6 0.4 1 20 997 1016 997 1019 0.92

11 14 0.00053 0.13 15.1 1.1 1 23 1027 1049 1027 1049 0.98

12 14 0.0034 0.81 12.5 2.9 1 23 1055 1077 1055 1077 0.98

13 14 2.7e-05 0.0065 19.1 5.3 1 23 1083 1105 1083 1105 0.98

14 14 0.001 0.24 14.2 5.6 1 23 1111 1133 1111 1134 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.3	2.2e+03	1.7	2.8	1	23	629	652	629	652	0.85
2	14	0.083	20	8.2	0.4	3	23	764	785	763	785	0.96
3	14	0.02	4.7	10.1	0.4	1	23	793	815	793	815	0.98
4	14	0.00012	0.029	17.1	3.3	2	23	818	839	817	839	0.97
5	14	0.00018	0.042	16.6	1.0	1	23	845	867	845	867	0.98
6	14	3.9e-06	0.00092	21.8	1.3	2	23	874	896	873	896	0.96
7	14	0.14	33	7.5	2.6	5	23	909	927	908	927	0.96
8	14	0.00022	0.052	16.3	1.6	2	23	933	955	932	955	0.96
9	14	0.041	9.9	9.1	0.0	2	23	971	991	970	991	0.97
10	14	9.3e-06	0.0022	20.6	0.4	1	20	997	1016	997	1019	0.92
11	14	0.00053	0.13	15.1	1.1	1	23	1027	1049	1027	1049	0.98
12	14	0.0034	0.81	12.5	2.9	1	23	1055	1077	1055	1077	0.98
13	14	2.7e-05	0.0065	19.1	5.3	1	23	1083	1105	1083	1105	0.98
14	14	0.001	0.24	14.2	5.6	1	23	1111	1133	1111	1134	0.95

Sequence Information

Coding Sequence: atGGAGAACGGCAGTGATTGCGTTTGTTGCCCTGTATGCACATTATACATGAGAGAAGGTGTTACCCTTCAAAGCCACTTGGACACTCATCCTAAAGATCAAGTGATTGCAGCGTTGGTGAAGGTTTCTAAGGGTAGAGAACATACTAGTTGTGGTGAATTAAGCACTCTTTCACCATCAAGCATTCCATTAAACCAAGCTCAAATTACTGGAGAggcaaataatttgtttacatctccAAGTAGCAACCATTATACCACAGCAATCACCTACCAGCAGTTTCTAAACAGTAACACCTGCCAAGGGAGCCCCATGATACCTCAATATGTCTCGGTGCCAACATTTCTTGCTGCTTCTGATTCTAGTCATCGCTCTTTGGACAAACCTGGAATTGTCCAGATGGTGTACAACCCATTCTTGTTACAACCACAGCTTGGTTCTGTAGTGTCTCCTACACAGCAACACTTCTTGAGCCCATTTCTACCTCCCACACCTTCCTTGATTCCCACATCCCCACCCCAGCAAGGTAATATTACAACTGCTACAACACTTGCTCAAACAACTCTTTCTCCCACACCGCCATCCACCTCTATATCACACTCAGCAAGCTTATCGCTACCGGTCTGTCAGGTTTCTAGTTCTACTCTTGCCCATTCAACCTCAGTGTCAAACTCTCCACTTACAGTCCTTCCTCATCTTCATGTTAATGAAACGAGACTCCCTCTGAGTACGGTCATGAGCAATTCTTCATATTGCTCAGATTTGCAGGATATGTCTAGTGAATGTTGTGTAGAGTCAACTCAAAATAGtatcattcaaaataaaatacatatacaagACCAAAGGACATTTGAGAATGCCGCGAGTACATCAAGAAATTTTGCTCAAGATAGACTAGTTTGTTCCCATGAAGAAACATTGTGTATGTCTAAAGTTGAAATTCCTGAATGTTTTGATATGTTGAATAAAAGAGTTGGACAAACTGAAGGCTGTAGTGAATTAAGAATAGAAACAGGTGAAACTGTTGAAGATAATGATGTTGAAGCATTGAGTCCTAGTTTAGAAGTTAAGAACGACCTAAATTTATCCACAGAAATTGAAAATTGCATTGGTGAAGATGATACTGAGAGTCTGGCAGAAGAACAGGAAATAGAAGAAATCTACCCATCAAATGGAAATATTTCTGAGAGAAGAGAAAGACTCCAAATTGTATCAATCACTAGACGGTCCTCGCGGTGTATTCAAGTTCCAGTAAGTGGTGAAGAATTCATTACCTCAGACAGCAGGTCCTCTTTTGACTCATCAAAACATGATTCGTCAAGGGATgGTGAACCAGCTAGTAGCAACACAGTTTTGACTTTAGAATCTCCAGGGACTGTAAATATTATCGAGATTGATGGCATTCACATTCTGGTGCCAAGCGAATTTCTGGACAACACTGGAAAAATGCTGAAAGGGAAAGAGAGCTCTGGGTCTTTGACAGCACTCACCACAATCTCACCACATCAGATGATTGAAGACGTGGAGGTAGAAGTCACGACTGGAGCCAATTTGGACATTCAGGCAGATGAGACTATGCCTCCAAAAGGCGAGCTCTCGGAACAGGAAAGTGTTGGTGGTAACGACAGTTCTCTCTGGGTTCAGGCTGTTAGAAATGAAGATGAAGATGTGTCGGCTTCATACGACCTATTGGCACGAGAAAGCTGGGAAGCGTCTGATGGCTCTGATGGTGAAGGCAACATGGACATAATTTCCACAGTTAACACTGTCACCCAACAAACTGGCAACATCAATGAGAACATCAAAGAAGGTGGTAAACCCCACAAAAACAAATCCACTTTGTCAAAGCAACAAACCCAGCGCAAATCAAAGGTTCTTCGTTCGTATATGTGCTGGACATGTGGTAATTCATTCAACTGTCCAAAGGAACGCCGTGTCCACCAAGCAGCATGTCACCCAGGGGAGGGTGCAAGTGGCCATTCCAGGGCTCTACCCAAAAAGCCGAGCGCTGGTAAGAGGAAGACTCGGAGTAGTAAGGTGAAAGAAGAAACCAATGAAGAGAGGAAACTTTGCATTGAGGCGGATCACACAAACTTTGAACAAGTGGTCGTCAAAACGGACAATGATCCTGGCATGCTGAAAGAAGATGTTAACATTGGCCAAGAAGTACAGATGTGTGTGGTTGACGAGGGTGGGGCAGAGTTCCCAGTTGAAATTGAACTAGAGTCTATGGAAGAGCagaataaaattgaaagtgAATTGATAGAAAGTCAGGATGGTAAGCGTTTATGTAATAAATGTCATCAAGTGCTCCCTTCGGACAAAGCGCTTAAAAATCATATTGCATCTGCACATATAAGAAGGAGCAACTCAAAATATACATGCATGACCTGTAAAGAAGACTTGGGTTCTGAATCCCAGTTAACTCTACACTACAGGGTACACCCATTAGAATGTTCACATTGCGGCAAGTATTTTTACCGGCGGCAAAACATGAGCCTCCATATTAGGCGACACCTTGGTATTAAACCTTATAAGTGTACTGTCTGTGATAAGGGCTTCATTACTAGACAGAAGTTGTTAGAGCATAGCAATTCCCATACAGGTAATGCCCCTTTGAAGTGTCCTATGTGTGATGAAACATTCCGCCGCTACAGCAATCTTATACAACACAAAAATAAGTATCACCTGAAACTAAAGAAGAAGGTAAAAGATTTCATCTGCCACTGTGGTGAGATATTCCACTCTAAAAAGAAGTTGATCTGGCATCAAGAGATTCACAGCGAAAAACCTAAGTCGTGTATGTATTGCAGCGAACGCTTTGTCCATGAAGCAAGCTTGACAAGACATATTCGCAGGGCTCATGATCAAAGCtacatttcaaaaaatactCGAGAGACTGAGAATATAGAGTGTCCAACTTGTGGGGGTATGTTTCTCAAGACATCACTTGCTGTTCACTTACGTGTTCATGCTGGACTTCGACCTTTCTCTTGTCCTATTTGTGGAAAAGATTTCACCACAAGGTGGAATCTGCAGCTTCATCGCTGGACGCATGCGTCTCGTTCGTCCAAGCCGTTCAAGTGCACTCTCTGCAAAAGTGCTTTCATTCGTCGCTCAGACTACGTGTCACACATTAATTCACATCGCAATGTACGCCCATACACTTGCAATTTCTGCGGCGCACAGTTTATACGAAAATACAATTGTATTCGGCATGTTCGAGAGCATGAGACAAACAAATCATACGCCTGCAGCATCTGCCACAAGACTTTCCACCGCAGTTACTACTTGAAGGAACACTTGCGAGTGCATAGCGGCGCCCGTCCGTTTGCTTGCCACATTTGCGGCAAAGCATCGACGACAAAGTCTAACCATAACAAACACATTAAGATTCATCATGCCAGGGAGCCAGTAAACACAGAGGGCTAA
Protein Sequence: MENGSDCVCCPVCTLYMREGVTLQSHLDTHPKDQVIAALVKVSKGREHTSCGELSTLSPSSIPLNQAQITGEANNLFTSPSSNHYTTAITYQQFLNSNTCQGSPMIPQYVSVPTFLAASDSSHRSLDKPGIVQMVYNPFLLQPQLGSVVSPTQQHFLSPFLPPTPSLIPTSPPQQGNITTATTLAQTTLSPTPPSTSISHSASLSLPVCQVSSSTLAHSTSVSNSPLTVLPHLHVNETRLPLSTVMSNSSYCSDLQDMSSECCVESTQNSIIQNKIHIQDQRTFENAASTSRNFAQDRLVCSHEETLCMSKVEIPECFDMLNKRVGQTEGCSELRIETGETVEDNDVEALSPSLEVKNDLNLSTEIENCIGEDDTESLAEEQEIEEIYPSNGNISERRERLQIVSITRRSSRCIQVPVSGEEFITSDSRSSFDSSKHDSSRDGEPASSNTVLTLESPGTVNIIEIDGIHILVPSEFLDNTGKMLKGKESSGSLTALTTISPHQMIEDVEVEVTTGANLDIQADETMPPKGELSEQESVGGNDSSLWVQAVRNEDEDVSASYDLLARESWEASDGSDGEGNMDIISTVNTVTQQTGNINENIKEGGKPHKNKSTLSKQQTQRKSKVLRSYMCWTCGNSFNCPKERRVHQAACHPGEGASGHSRALPKKPSAGKRKTRSSKVKEETNEERKLCIEADHTNFEQVVVKTDNDPGMLKEDVNIGQEVQMCVVDEGGAEFPVEIELESMEEQNKIESELIESQDGKRLCNKCHQVLPSDKALKNHIASAHIRRSNSKYTCMTCKEDLGSESQLTLHYRVHPLECSHCGKYFYRRQNMSLHIRRHLGIKPYKCTVCDKGFITRQKLLEHSNSHTGNAPLKCPMCDETFRRYSNLIQHKNKYHLKLKKKVKDFICHCGEIFHSKKKLIWHQEIHSEKPKSCMYCSERFVHEASLTRHIRRAHDQSYISKNTRETENIECPTCGGMFLKTSLAVHLRVHAGLRPFSCPICGKDFTTRWNLQLHRWTHASRSSKPFKCTLCKSAFIRRSDYVSHINSHRNVRPYTCNFCGAQFIRKYNCIRHVREHETNKSYACSICHKTFHRSYYLKEHLRVHSGARPFACHICGKASTTKSNHNKHIKIHHAREPVNTEG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01445132; iTF_01450877; iTF_01445915; iTF_01448881; iTF_01449884; iTF_01447837;
90% Identity: iTF_01450877;
80% Identity: -