Basic Information

Insect: Timema douglasi
Gene Symbol: -
Assembly: GCA_901482245.1
Location: CABEEJ010008209.1:5258-18016[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0032 0.77 12.6 2.1 1 23 326 349 326 350 0.97

2 18 0.14 34 7.4 0.7 1 23 379 401 379 401 0.98

3 18 2.2e-06 0.00053 22.6 3.7 1 23 407 429 407 429 0.98

4 18 0.00012 0.028 17.1 0.5 1 23 432 454 432 454 0.98

5 18 0.032 7.6 9.5 1.0 1 23 814 836 814 836 0.95

6 18 3.7e-05 0.0088 18.7 1.0 1 23 844 866 844 866 0.94

7 18 0.43 1e+02 5.9 0.2 2 23 874 896 873 896 0.94

8 18 0.00044 0.1 15.3 0.1 2 23 929 951 928 951 0.96

9 18 8.3e-06 0.002 20.7 2.4 1 23 964 986 964 986 0.98

10 18 5.8 1.4e+03 2.4 1.6 1 23 1005 1027 1005 1027 0.94

11 18 0.0012 0.29 14.0 0.1 3 23 1035 1056 1034 1056 0.97

12 18 0.043 10 9.1 4.6 3 23 1061 1081 1060 1081 0.97

13 18 0.00044 0.1 15.3 0.5 3 23 1091 1111 1089 1111 0.95

14 18 1.7 4e+02 4.1 0.1 1 23 1117 1139 1117 1139 0.90

15 18 2.9e-06 0.00068 22.2 1.3 1 23 1145 1167 1145 1167 0.97

16 18 6.3e-05 0.015 18.0 5.1 1 23 1173 1196 1173 1196 0.98

17 18 4.1e-05 0.0096 18.6 1.7 1 23 1202 1224 1202 1224 0.96

18 18 0.00026 0.061 16.1 0.7 1 23 1230 1253 1230 1253 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0032	0.77	12.6	2.1	1	23	326	349	326	350	0.97
2	18	0.14	34	7.4	0.7	1	23	379	401	379	401	0.98
3	18	2.2e-06	0.00053	22.6	3.7	1	23	407	429	407	429	0.98
4	18	0.00012	0.028	17.1	0.5	1	23	432	454	432	454	0.98
5	18	0.032	7.6	9.5	1.0	1	23	814	836	814	836	0.95
6	18	3.7e-05	0.0088	18.7	1.0	1	23	844	866	844	866	0.94
7	18	0.43	1e+02	5.9	0.2	2	23	874	896	873	896	0.94
8	18	0.00044	0.1	15.3	0.1	2	23	929	951	928	951	0.96
9	18	8.3e-06	0.002	20.7	2.4	1	23	964	986	964	986	0.98
10	18	5.8	1.4e+03	2.4	1.6	1	23	1005	1027	1005	1027	0.94
11	18	0.0012	0.29	14.0	0.1	3	23	1035	1056	1034	1056	0.97
12	18	0.043	10	9.1	4.6	3	23	1061	1081	1060	1081	0.97
13	18	0.00044	0.1	15.3	0.5	3	23	1091	1111	1089	1111	0.95
14	18	1.7	4e+02	4.1	0.1	1	23	1117	1139	1117	1139	0.90
15	18	2.9e-06	0.00068	22.2	1.3	1	23	1145	1167	1145	1167	0.97
16	18	6.3e-05	0.015	18.0	5.1	1	23	1173	1196	1173	1196	0.98
17	18	4.1e-05	0.0096	18.6	1.7	1	23	1202	1224	1202	1224	0.96
18	18	0.00026	0.061	16.1	0.7	1	23	1230	1253	1230	1253	0.94

Sequence Information

Coding Sequence: ATGAACTTCTGGAACCCTGCAGCAAACGCCTCAGCTGCTTTAGCGTCCGAACTTGCAGCCTCTCTGTGCCTCAAAACACTATGGATGCAACTTCTTCTCTTAAAGTTATCAAACCATCCCCTACTTGCCTTGAAGCCTTCTTCATTTTCTGTCGATGTACCTGGCAGTCTAATTACAAGGTCTTCCCTGACCCAGACAATCTCAAAAGTTGTCTCCCCCTCCAGAAGTCATTCCACTGCCGCCCCTCTGGTGTCGGTCATGAAGACAACGGGAGACGCGAAGAGCAGGCGGGCCTACGAGAAGCCCGCCCCTCGCAAGAAACCCGTCCCTTGTTTCATCTGCGATGAGCCCGTGGAGGGAGAAGGGGTGTCCCTGGTAGTGGGCAACACTCCGTACTCCAACACGAGTTTCCCTGCCAAGATCGGTCAGCTGATGGGTGACGGGTTCATGGTGGTGGTCACTAAGGAGGATGGTCTGTGTCGCCGATGTTCGGCGCTCCTGAACCACTTGGACAAGCTGGAGTTTGACCTGGCCATCGTGAAGAAGGCTCTGACTGGCTACCTCAAGATGAAGTACCAGTTGCTAGACGAGGGGGAGGAAGAGGTGACCCCGCCCTCCGACAACACGTTGCACAGCCTGCAGTTGCTCGACCAGCTCAACAAGTTCTCAAAGGTGACACACATACCTGCATCACCACCTGAGAGCCTTGTGGACCTCACGGGGTCCTCCAGTCAGTCCGACATCAAAATAGAGAGAGTCATGTCGATGGTCACCGACACCGCCAACACAAACTCGAGGGATAAAGTTGCCAAGAGCACTCTGGGAGCCTCCAACAGGCAGAATACCCCCATGACCCTGGACGTGGACGTGTCCGACCCGGACGCGACGATGTACCGCTGCACCTCGTGTAGATACAAGACCCTCCACATGCTCTCATTCGTGCAGCACCTCAAGACACACCCCAAGAAGACCTACTACAAGTGTTCCGAGTGCTCGCAGCAGTTTGAGAAGCGGAGCGACGCCCAACAACACATCACAACTGTCCACCACTGCAGCGATGTCGAGTTTGACGACGACGCCTCCACACCCGCCAACAAAGTCCCGGAGGCACCCCCGGCCCAGAAAAGGAAGGCGTTTGAGTGTGACATCTGCAGCTACCGCGACACGGACAAAGACCAGTTCGACAAACACCTGTTGTCCCACGCGCAACCGACCTTCTACGAGTGCAGCATCTGTTCCAAGAGGTTCAAGAGCAAGCAGTACCTGCAGAAACACATGAAGAACCACAAGATATACAAGTGTGGGATCTGCGGCTTGACCTTCAGGGTGAAGCTGGACCTTCTGAAACACTTCAAGGTTCACAAGAGCGACGAGCCGGCCGAGGACCCTCCTATGGAGGAGACCACGTCATCCTCGCCGGTCGAGGAGAAGGAAAACATGGAGCAGGAGGAGGCGTCGACACCGAAACGTTTGAAGCTTCATGAGGATTACGACCGGGTGGAGCAGATGCTGGAGATGATGCACTCCGGCGCCTCCGTGCTTGAAGACCAGGAGCCGAAACAGGCCGGCGGTGAGACTACGGAGCAGGCCGGCGCCGAACACTCGGTGATGGATAGTCAAGACGACGTGGACAAAGTTGTAGAGAGCATCTCGGAACACTTGAACGGCGAGAAAGAGGAAGAAAACTTGGATGCCGGAGAAAGTTTGGGCGGGCTCGAACCGAAGACGGTCGATGACTCTCTAGAAAGCGCCGAAGAACGCGTTGAAGACGAGAAGGAGGAGGATAGCTCAGATGATCAAACTGTTACCGAGAAAAGATTTGTCAGCCTGGAAGAAGTGAAAAATATCGCAGACAGTTTCGACAGTTTGGACGACGTGGCCGAGGGCTCCGAGCTGATCCACCAAGGTGATCCAGATGTTTCCAACGACAAACTAGAGAACGGCACCGCCAAGTTGGAAAAGCCGAAGATGGAATTGGAAGTCGATGTGAATAAAGAGGCAGACAAGATAGTAAGTGAAGCTCTTGGAGTGGATTTGAACGAATATATCAGTAATGACATGGACATGGACATGAGCGCATCGTCCGACAAACCAGAGGAGAACAGCCTGCCCTCCCTGGTGTCTGAAAACTCTGGGTCACTACCTGAGATGGAGGAGGCCATAGAGAAGGACCACCTCACAGATGTTAACGAACCAATCACAGGTATGACACAATCACCCGTTATTAATGCTAGCCAGGAGATGAAGTCAGAACTAGTTGACAATATGTTTGATGGACTTTTCTGGCACTGTCCCAATGAGTCATCTTTACCATTTCAGGTTGATGGCGATGGCCCTGCCCCGGATTTTGAGGTGGAGACACGTGGAACCGGTCTTCCGTCTCTCTCCACCGCCGCAGAGCGACGCACTCCGAACCTGGCCACCGCAAAGAGAAGAGTGTACCTGTGTTCGGCGTGCGGGCTGAGGTCGCGCTCGAGGAATCAGATCCGGAGGCATCTAAGGAGCCACATCGCGCTCAGGAAGAGAAGTTTCGTATGCCGTGTCTGCAGCAAGATTTTCACCACCCAGGGTAACTTGACCCGTCATTCAGTCAAACATTCACCTGAGAACAAGAGTGTCCCGTGTGACGTGTGTGACGGTTTATTCTATGACAGACTCCACTTGAAGGAACACACGGGCACCGCCCACTCCGGGAGACACAAGTGCTCGTTCTGCGACACGTCACTGACCAGCAGGAAGGCTCGCTGGTTTCACGAGAAGACTCACCCCGAGCGGCTCGTGCAGAAATGTGATGACTGCGGAGAGGCGTTTGAAACCGAGGTGAAGCTCAAGATTCACAAGGAGACCGTCCATGCTGATGCCACGTTTGAGCTCACAGAGGGTAAGATCTACAAGTGCCACCTGTGTGGTAAGGTCGTATCGACATACTTCAACCTGAGGAGACACCTGCAGGGTCACGAGGGCGACGTAGGGCAGACCAATTGCAACACGTGTCCGACGGACCCCGACAACTACAACTGTTCGTTCTGCCTTCTAGTGTTTCCCAGTAAGCAGTTGTGTAAGATTCACGAGGCGACCCATCCCGAGAAGCTGTCCCACGGGTGCGTTGATTGTGGCGAGCGCTTTGCGACGAATGAGCGTCTAGAACGGCACAAACAGGTGATGCATCGAGACCCCCACTGCAAGTACTGCGGCAGGTACTATGGGGACCTGAAGAAGCTGTGTGCCCACGAGCGTCGGCACGAGAGGTACAGAAAGATGTCTTTGGACTGTACACAGTGtgataaaacattcaaaacccCCACGGGGCTCAAGTTCCACATGGCTGTGCACACGGGAGAGTACGCATTCTACTGCGAGATCTGCGGTCAAGGCAGGCACTCCGAGGTGGTCCTCGCGGAGCACGTGGCCACTCACACTAAGGAGATCCGTTACGTTTGTGACTACTGCGGTAAGAAGTTCTCCTCCAACAGCACCTACCGGGTACACCGCCTCTGGCACGAGAACCCCCTTCCTTATAAGTGTACCACATGTGGGAAGTGCTTCAAACACACGTCGGTACTTGCCGTCCATAGACGACGAGCGCACACAGGGGAGCGCCCTCACAAGTGCCCTTATTGCTCGTTGTCGTTCACTGTGTCGAGCACGCTACGCAAGCACGTTATCCTGCACACCCGGCAGTTCCCGCACAACTGCGCTGTCTGCGGGAAGGGGTACACCACCAGGACTAAGTTGGCCCGTCATCTCGCCAAGGCTCACAGCGACAACGAAATGCTCGACAATCTTGGTCACCACTGTGAGTACAAGATGGCGCTGCGGCCCAGTGAGGCCTCACCATCGGTGGAACAACTTGAACGCTCTGGTGAGTGA
Protein Sequence: MNFWNPAANASAALASELAASLCLKTLWMQLLLLKLSNHPLLALKPSSFSVDVPGSLITRSSLTQTISKVVSPSRSHSTAAPLVSVMKTTGDAKSRRAYEKPAPRKKPVPCFICDEPVEGEGVSLVVGNTPYSNTSFPAKIGQLMGDGFMVVVTKEDGLCRRCSALLNHLDKLEFDLAIVKKALTGYLKMKYQLLDEGEEEVTPPSDNTLHSLQLLDQLNKFSKVTHIPASPPESLVDLTGSSSQSDIKIERVMSMVTDTANTNSRDKVAKSTLGASNRQNTPMTLDVDVSDPDATMYRCTSCRYKTLHMLSFVQHLKTHPKKTYYKCSECSQQFEKRSDAQQHITTVHHCSDVEFDDDASTPANKVPEAPPAQKRKAFECDICSYRDTDKDQFDKHLLSHAQPTFYECSICSKRFKSKQYLQKHMKNHKIYKCGICGLTFRVKLDLLKHFKVHKSDEPAEDPPMEETTSSSPVEEKENMEQEEASTPKRLKLHEDYDRVEQMLEMMHSGASVLEDQEPKQAGGETTEQAGAEHSVMDSQDDVDKVVESISEHLNGEKEEENLDAGESLGGLEPKTVDDSLESAEERVEDEKEEDSSDDQTVTEKRFVSLEEVKNIADSFDSLDDVAEGSELIHQGDPDVSNDKLENGTAKLEKPKMELEVDVNKEADKIVSEALGVDLNEYISNDMDMDMSASSDKPEENSLPSLVSENSGSLPEMEEAIEKDHLTDVNEPITGMTQSPVINASQEMKSELVDNMFDGLFWHCPNESSLPFQVDGDGPAPDFEVETRGTGLPSLSTAAERRTPNLATAKRRVYLCSACGLRSRSRNQIRRHLRSHIALRKRSFVCRVCSKIFTTQGNLTRHSVKHSPENKSVPCDVCDGLFYDRLHLKEHTGTAHSGRHKCSFCDTSLTSRKARWFHEKTHPERLVQKCDDCGEAFETEVKLKIHKETVHADATFELTEGKIYKCHLCGKVVSTYFNLRRHLQGHEGDVGQTNCNTCPTDPDNYNCSFCLLVFPSKQLCKIHEATHPEKLSHGCVDCGERFATNERLERHKQVMHRDPHCKYCGRYYGDLKKLCAHERRHERYRKMSLDCTQCDKTFKTPTGLKFHMAVHTGEYAFYCEICGQGRHSEVVLAEHVATHTKEIRYVCDYCGKKFSSNSTYRVHRLWHENPLPYKCTTCGKCFKHTSVLAVHRRRAHTGERPHKCPYCSLSFTVSSTLRKHVILHTRQFPHNCAVCGKGYTTRTKLARHLAKAHSDNEMLDNLGHHCEYKMALRPSEASPSVEQLERSGE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449831;
90% Identity: iTF_01445018;
80% Identity: -