Tbar017907.1
Basic Information
- Insect
- Timema bartmani
- Gene Symbol
- pnr
- Assembly
- GCA_902151455.1
- Location
- CABFWB010001203.1:38735-55127[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 8.7e+04 -6.9 4.2 21 26 13 18 11 18 0.80 2 2 1e-16 1.2e-12 49.3 5.1 1 35 454 487 454 488 0.98
Sequence Information
- Coding Sequence
- ATGTGCAGTTTACcgccgaaattttatgaactgTGTCGTCTTTGTTTATCCTGTGATGGTGTGAAATCATCTATTTTCGATGACGAAGGAATTCAGCGTAactttccatttaaaataatgacgTGTCTCTCTATATTGGTCTCTGAGCGGGATCTTCTGCCGCCTTCAATATGTCACCGCTGTGTGTACAAGCTGGACGTGTTGTACGACTTTAGGGAAGTGTCTCGGAAGTCTGATCTCATCCTCAAACAATACCTAGGCCTAAGTTATTCCGAGCGCATCGTCGGTGGTGTTCCGGACCAGCGGAAGCAGCCGGCATGCTCGCCCGACAGCAGTAAGGGCAGCCCCTCCAGACCCGAGGAGCCCAAGCGCTCCTGTAAGAATGGGGACATGTTGGCCATGGAAAAGGAGATGCGGGAGATGGCGGAGACGGAGGCCCTGGAACTGAGGTTGAAGCGGGAGCCGGCAGAAGAGGATGAGGATGAAGAGATGTTGAATGGGGAACTGGACAAGGGGCAGGTGAACGGGATCTCTCCACACCGGGACAAGGGGGACTCTGGAGAGGAAGCAGAGGAGGACCACTCGGACATGTCGGACTATGAGAGCGGGGGTTTGTCAGCGGAGGTCAAGGGAGGCGAGTCCAACACGTCATTACAGGATGAGGGTCGACTGGTGATTGACCAGGATGAAGGGGTCAAGGCGGAGCCCCAGGAGGAAGAGGAGGAAATTGAGGAGGTAGCGACACAGGAGGGTGGCAGCCCTCACCCCTCTTCTGACAAGGACAGCGAGTGTGGCTCTAGTCCCAGGGACTGGCACCACCGCACCAGTCCAATTACCAGTAACCTCGGAAGTAACGGGGGCGGAGGGGAGGCCAGCAACCTCCTGAGGACACTAATCTCCTGCCGCAAGCTGGGCATCCCGCCTATGGAGGCTGCCGCCAACAACCGACTCGCCCCGATGGCCTCATCACTGCAGCACTCGCTCAAGTCTCGCAGCAAACTGTATGCAGCGATCCACGGATCTCCACTTGTCCCTCCTCTTTCGTCGGAGGGCCTGCATTCTCCCGCCGTCGTGTTAGGGAACCGGACCAACCTTCTGCAGAGCTCTGAAGAAGGGTCCCCCCCTGGTGCCTTGTCCATGGTAATCAAGTCGATAGACTCCTGCTCCATGAACAACAACGTCCCCGCTGTGGCGAGTAAGCATGATAGCAGCAGGAGGAAGCAGAGTTTTCCTTCCAAGGCAGACCCTAGCCTCCAGACTGAGTCTCTGTACGTTCCCGACTTCACCGGTGGCAACCCATGGTGCAATATCTCCTCCAGCAAGTCAGGAAGGTTGGCGACACGGCGTGTGGACCTGTCTTGCACCAACTGTGGTACCATGACAACAACCATATGGCGGCGCAACATGAAGGGAGAGATGGTGTGTAACGCCTGCGGACTCTACTACAAGCTGCACGGTGTCAACCGGCCGGTCACAATGAGACGTGACACTATTCACACGCGCCGTCGGCGCCCTAAGGGGGAGAAGGGTAGTGGCCGACACAGAAACAAAGGTACCAATAGTGGCAGCAGCAGTAGTGACGATCCGGTGGACATGTTGGCAGCGCTTCGTAGGCAGATCCAGCCTCACCTTATGATGGCCCTCCAGTCTGTGCCCGAGTCCTGCACGCCCCCTTCAAGCATGTCTCTCACCGCTGAGGTGAAGACAGAGCCAATTGACTCAGAAGAGGAAGAAGACGAAGGGGGTGAGGAAGACGAGGAAGGTGCGGACGAAGACATGGCAGATCTTCCTTTGAACCTTGTGTCTACTTCGCTGGCCGAACCGACCCAGTGA
- Protein Sequence
- MCSLPPKFYELCRLCLSCDGVKSSIFDDEGIQRNFPFKIMTCLSILVSERDLLPPSICHRCVYKLDVLYDFREVSRKSDLILKQYLGLSYSERIVGGVPDQRKQPACSPDSSKGSPSRPEEPKRSCKNGDMLAMEKEMREMAETEALELRLKREPAEEDEDEEMLNGELDKGQVNGISPHRDKGDSGEEAEEDHSDMSDYESGGLSAEVKGGESNTSLQDEGRLVIDQDEGVKAEPQEEEEEIEEVATQEGGSPHPSSDKDSECGSSPRDWHHRTSPITSNLGSNGGGGEASNLLRTLISCRKLGIPPMEAAANNRLAPMASSLQHSLKSRSKLYAAIHGSPLVPPLSSEGLHSPAVVLGNRTNLLQSSEEGSPPGALSMVIKSIDSCSMNNNVPAVASKHDSSRRKQSFPSKADPSLQTESLYVPDFTGGNPWCNISSSKSGRLATRRVDLSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKGSGRHRNKGTNSGSSSSDDPVDMLAALRRQIQPHLMMALQSVPESCTPPSSMSLTAEVKTEPIDSEEEEDEGGEEDEEGADEDMADLPLNLVSTSLAEPTQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01448110; iTF_01449145; iTF_01446172; iTF_01447164; iTF_01451142;
- 90% Identity
- iTF_01451142; iTF_01448110; iTF_01449145; iTF_01446172; iTF_01447164;
- 80% Identity
- -