Tcri025339.1
Basic Information
- Insect
- Timema cristinae
- Gene Symbol
- pnr
- Assembly
- GCA_002928295.1
- Location
- CM009479.1:129225741-129233410[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-16 2.4e-12 47.7 6.1 1 35 343 376 343 377 0.97
Sequence Information
- Coding Sequence
- ATGCAGGACCAGCGGAAGCAGCCGGCATGCTCGCCTGACAGCAGTAAGGGAAGCCCCTCCAGGCCTGAGGAGCCCAAGCGCTCCTGTAAGAACGGGGACGTGTTGGCCATGGAGAAGGAGATGCGGGAGATGGCGGAAACGGAGGCCCTGGAGCTGAGGCTGAAGCGGGAGCCGTCAGAGGAGGATGAGGAAGAAGAAATGTTGAACGGGGAACAAGACAAGGGGCAGGTGAACGGGATCTCTCCACACAGGGACAAGGGGGACTCTGGAGACGAAGCAGAGGAGGACCACTCGGATATGTCGGACTGTGAGAGTGGGGGTTTGTCCGCGGAGGTCAAGGGAGGCGAGTCCACCACATCGCTACAGGACGAGGGTCGACTGGTGATCGACCAGGACGAAGGGGTCAAGGAGGAGCCCGGGGAGGTGGCGACACAGGAGGACTGCAAGGACAGCGAGTGCGGCTCTAGTCCCAGGGACTGGCACCACCGCACCAGTCCAATCACCAGTAACCTTGGAAGTAACGGGGGTGGAGGGGAGGCCAGCAACCTTTTGAGGACACTAATCTCCTGCCGCAAGCTGGGCATCCCGCCTATGGAGGCTGCCGCCAACAACCGACTCGCCCCGATGGCCTCGTCACTGCAGCACTCGCTCAAGTCCCGCAGCAAGCTGTACGCGGCGATCCACGGCTCCCCACTTGTCCCTCCTCTCTCGTCAGAGAGCCCGCATTCTCCCGCTGTCGTGTTGGGGAACCGGACCAACCTTCTGCAGAGCTCTGAAGAAGGGTCCCCCCCTGGTGCCCTGTCCATGGTCATCAAGTCAATAGATGCCTGCTCCATGAACAACAACATCCTTGCTGTGGCGAGTAAGCATGATAGCAGCAGGAGGAAGCAGAGTTTTCCTTCCAAGGCCGACCCTAGCCTCCAGACTGAGTCTCTGTACGTTCCTGACTTCACTGGTGGCAACCCGTGGTGCAATATCTCCTCCAGCAAGTCAGGAAGGTTGGCGACACGGCGTGTGGACCTGTCCTGCACCAACTGTGGCACCATGACAACAACCATATGGCGGCGCAACACAAAGGGAGAAATGGTGTGCAACGCCTGCGGACTCTACTACAAGCTGCACGGTGTCAACCGGCCAGTCACGATGAGACGTGACACTATCCACACGCGCCGTCGGCGCCCCAAGGGGGAGAAGAGCAGTGGTCGACACAGAAACAAAGGTACCAATAGTGGCAGCAGCAGTAGTGACGATCCGGTGGACATGTTGGCAGCCCTTCGTAGGCAGATCCAGCCTCACCTTATGATGGCCCTCCAGTCTGTGCCAGAGTCCTGCACGCCCCCTTCAAGTGTGTCTCTCGCCGCTGAGGTGAAGACAGAGCCGGTCGACTCGGAGGAGGAAGAAGATGAAGGGGGGGAGGAAGATGAGGAAGAGGCGGACGAAGACATGGCAGACCTTCCTTTGAACCTCGTGTCCACTTCGCTGGCCGAACCGACCCAGTGA
- Protein Sequence
- MQDQRKQPACSPDSSKGSPSRPEEPKRSCKNGDVLAMEKEMREMAETEALELRLKREPSEEDEEEEMLNGEQDKGQVNGISPHRDKGDSGDEAEEDHSDMSDCESGGLSAEVKGGESTTSLQDEGRLVIDQDEGVKEEPGEVATQEDCKDSECGSSPRDWHHRTSPITSNLGSNGGGGEASNLLRTLISCRKLGIPPMEAAANNRLAPMASSLQHSLKSRSKLYAAIHGSPLVPPLSSESPHSPAVVLGNRTNLLQSSEEGSPPGALSMVIKSIDACSMNNNILAVASKHDSSRRKQSFPSKADPSLQTESLYVPDFTGGNPWCNISSSKSGRLATRRVDLSCTNCGTMTTTIWRRNTKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKSSGRHRNKGTNSGSSSSDDPVDMLAALRRQIQPHLMMALQSVPESCTPPSSVSLAAEVKTEPVDSEEEEDEGGEEDEEEADEDMADLPLNLVSTSLAEPTQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01445331;
- 90% Identity
- iTF_01445331;
- 80% Identity
- -