Basic Information

Insect: Timema bartmani
Gene Symbol: SNAPC4
Assembly: GCA_902151455.1
Location: CABFWB010000745.1:74981-82458[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.68 2.8e+03 0.7 0.2 2 18 142 158 141 171 0.87

2 6 0.79 3.3e+03 0.5 0.1 3 19 259 275 257 287 0.88

3 6 1.4e-10 5.7e-07 31.7 0.1 1 45 369 415 369 416 0.95

4 6 2.7e-13 1.1e-09 40.4 0.1 1 43 422 468 422 470 0.96

5 6 9.1e-15 3.8e-11 45.1 0.0 1 46 477 522 477 522 0.97

6 6 3.4e-13 1.4e-09 40.1 0.8 3 44 532 574 531 575 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.68	2.8e+03	0.7	0.2	2	18	142	158	141	171	0.87
2	6	0.79	3.3e+03	0.5	0.1	3	19	259	275	257	287	0.88
3	6	1.4e-10	5.7e-07	31.7	0.1	1	45	369	415	369	416	0.95
4	6	2.7e-13	1.1e-09	40.4	0.1	1	43	422	468	422	470	0.96
5	6	9.1e-15	3.8e-11	45.1	0.0	1	46	477	522	477	522	0.97
6	6	3.4e-13	1.4e-09	40.1	0.8	3	44	532	574	531	575	0.96

Sequence Information

Coding Sequence: ATGGATAACAACACGAAAAGAAAGAATGGTGCTGAAATGACATCTGCACTAGAAGTTGACATATGCTTACTTGAAGGTGACAAAGacccaattatttttgatcCCACATATGGGGGTCCACCAATCACAAAGACACCTGTGATTAAAAGAAAGCCAGGCAGACCGCCTAacgttaataaaaaaactacaaatggCGAGGCTCCAAAAGAAGAGAGCATATGCTTGGATGATGAAAGAACAGAAATACTCTTTCCTGTCCAGAAAATTCAAGCCGTGCCTAAGAAAATTCAAGGTACTACGCCTAAACAATATTCCTGTAAAAAGGGTAGCCCAAAAAAAGTGTGTCTTATTACTTCTATTGAGAATGATGCTTGCTCTAATGGTAGTAACGAAGATTTGATGTTTCCTGACGAGAGAGATGAAAATCCTTTTACATTGGATgaacttaacaaattaattgagCTTCAGGAAAAGGAAATCGCCTCCTTGAAGAAATGGGATGCACTCTTATCAGAAACTAGCGTCCGTATAATCAACGAAAAGGAGGAGTGCTACCAAGAAGAGAATGAACTCCTACAACACTTTGCAACGAACAAACCTCCGAGACATAGGTCTGCAAACGATGTCACATTTTTTGCCAAAGACAGTTGGGTTTACCTATACGGGGCCCCGTACTTCAAGGATAGAAATTGTTTCCCACCCCTTCCTAACCACGATGTTCATTTGAAGAAAGCCAGGAATGAGAttaatttgatagatatttcCCAGGCCAGGAGGTGGAGAGCCCAAGATAagactattttggaaaaagcgGTAAAGAAACAGGAAATTGAGAAACTACTTGTCAAAAACAAAACAGACGAGCTTACCttattggaaaatttaaaacactgtTCAGAAAAAGACAAAATAACTCTTCAGGGAAAATTGGATGACATAAAGGCTACAGCTGATAATGTTAGCTCCCTTTCGCTGGCGGATTTAGTAGGCAACAAGTGGGTGGAATATGACTGGATGAGGATTTCAGTGACAGACTTTAAGAACCAGCACACGCCAGAGGAGTGCCGCGGAATGTGGTTAGGCTATATTCATCCCGCAATTGTTCGATCTCCATGGACCCATCAAGAGGACATGCGTCTCAAAGAGGTTGCATTGAGCTTCAAATGTCAGGATTGGCAACGAATCGCAGAAAAATTGGCAACAGGCCGCACTGCGTATCAGTGCATGTGTCAATATCAGATGCGactaaatgaaaatttgaagcGTGGAAAGTGGACAGACGATGAAGACAGATTGTTGAAGCAGGTGGTGGCAAGATATCGTGTTGGTTCTCATATCCCTTGGTCCAAGGTAGCTATACACATCCCAGACAGGACCAAGGTGCAGATTTTCAACCGCTGGAGGTATTCCATCGCGCCTCACATCAAGAAGGGAAGGTTTACTTCCGGAGAGGACCAGATGATCATAACTGCCTTGCAACGCTATGGCAAAAACTTTAAGCAGATCGCAAGGTTTTTGCCTGATAGGACACCCGTTCAAATTCGGGACCGATATAACTCAAATTTGCAGTACCTTGATCAAAAGGAACCATATAAATGGACTCAAGAGAAAGATCTGAAGTTATTAGAAATGGTGGAACAATTTGGGGACAAGAGCTGGAGTCACATCGCCAAAGAGTTTGTGGGGCACACCCGATCTCATGTCCGCCAGCGCTGGCTTACTATATCCAAGTTCCAGCAAAATAACCCCGATGTCAAGGACAGAATGCCAACTGCACGCTTAACCTTCCCTAAGCAACCCGTCTTGAAGAATGTCAAGGCCCTGGAGAAGACCCGCAATCTGGTAAATTTGGGTAGGTCTAATACAGTCTTGAGCGATGAAGCTCTTATTGAAGTTCGAGACGAGCTCGGTCTCGTAAGGAAACGTCCCGGGCGTAAACCAGGCCAAAAGAAAATACTGATACCAGCTGAGGAAGGCTTCATTGACTTTTATCGTGTGGCGTATCAACAGCCACCTGGTCGTAAGAAAGGTATTTATAATCGAGAGGGGCTACTCAATGAGGCAGAATGTATTAAACAATTTCTCGCGTTCTTTGGCGCCGTATTGCACATACCGACTGATGATTCTGTTATTAGTGCAGATGTCTGGAACGAAGGCTACCACAACAAAAATATACTCGAAATTTTGCGTGATGGAGATATCTATAACAGTTCAATGTTGATCAAGTTGGAGACACGCAGAAAACTGAAGTTGAGCCAAGAAAAGAGAAGACTCAACTTATTAAGAcgtaaaattaaggaaaaaagagCTATGTTAACTACGACTAATGAAAATGATGATGACAATATGGATATTGATTTGGAGAATTCACCCATTCAAGATTCCAAACCATCTCAAATTGTCagtcaaactaatatttataatgatttgGATACAATTCTAGGCATATCCTTGCCTAAAAAGAAGTGCACCTTTTGGTTGGCAGATCATGTTAAAAACTCTGGAATAAACATTGCCACAGGCAGTACAACTATAGTTCCATCCACAAGTAGTCAATATGCCACTACTAGAAACAAGAAAGCATCTGAGATTAAATTTGTAGAAAGTACCCCTGATGACAACGTAAATGTGACTCAAGGAAAACCAACACATAGTTCAGTGACTCTGAAACAAAATGTCTGTCCAAAACAAGCTGTACCTTCGGTTTCTTCATCGGCATCTAAAGGTGAAACTTTTTCCTCATCTAGTGGCCTAGATGCTTCTAGTaatgactttgaaaatttaaggcaaaaggtaagaaaaagaaacaaatcCCAAAGTCATATTGTCTGGAGCTCACAAAGCAGAGATGTAGCCTTATGCCTTCCCCCCAACCAAACCTCTCTCATTGGTTGCCGCACACTCTTGTTGTGCCGTCGTGGACTATCCAAGGACATTGAAAACTATTGCTCGCCACAGAAGGAAGACACAACCCATAATGAGTCTCCGTTGCTTGACAATTCTAGTGATAGCTCCGACATGGATCATGAAGGGGACACCAAGCGATATCAAGGAAAAGATCAAGGCCGTCAGAATTTTGAAGAAGCATCAGctctctttaaaaaaagattcaCGTCTTTGTTTCTTATTCCTGCCATAATGTCTAATAGAAAGCCACAGTTTACTGATTACTTTTCAAACAATGATGAAATAATGGATACATTTACAGATTTAATTTTGGACGACGACgatgacgacgacgacgacgatgaTTCAGAAAGGgaagaagataaagaaaaaattaatcataagtACGAAGGTCTAAAACAATATAAGAAAAAGACCCgaccatatttaaaaagaagtgATAAGGCTTGTGTTGTTGATTCAGAAAACACttctattgattttaataaacagGACTGTATGAAGGATGTGTCACTCAAGAAGTTGCAGAAAAAACAAgaagaaacacataaaaaaacactgtatGCTTTACGACCAAGAAAGAAGCTGTCAAATTTGACTGACTCATAG
Protein Sequence: MDNNTKRKNGAEMTSALEVDICLLEGDKDPIIFDPTYGGPPITKTPVIKRKPGRPPNVNKKTTNGEAPKEESICLDDERTEILFPVQKIQAVPKKIQGTTPKQYSCKKGSPKKVCLITSIENDACSNGSNEDLMFPDERDENPFTLDELNKLIELQEKEIASLKKWDALLSETSVRIINEKEECYQEENELLQHFATNKPPRHRSANDVTFFAKDSWVYLYGAPYFKDRNCFPPLPNHDVHLKKARNEINLIDISQARRWRAQDKTILEKAVKKQEIEKLLVKNKTDELTLLENLKHCSEKDKITLQGKLDDIKATADNVSSLSLADLVGNKWVEYDWMRISVTDFKNQHTPEECRGMWLGYIHPAIVRSPWTHQEDMRLKEVALSFKCQDWQRIAEKLATGRTAYQCMCQYQMRLNENLKRGKWTDDEDRLLKQVVARYRVGSHIPWSKVAIHIPDRTKVQIFNRWRYSIAPHIKKGRFTSGEDQMIITALQRYGKNFKQIARFLPDRTPVQIRDRYNSNLQYLDQKEPYKWTQEKDLKLLEMVEQFGDKSWSHIAKEFVGHTRSHVRQRWLTISKFQQNNPDVKDRMPTARLTFPKQPVLKNVKALEKTRNLVNLGRSNTVLSDEALIEVRDELGLVRKRPGRKPGQKKILIPAEEGFIDFYRVAYQQPPGRKKGIYNREGLLNEAECIKQFLAFFGAVLHIPTDDSVISADVWNEGYHNKNILEILRDGDIYNSSMLIKLETRRKLKLSQEKRRLNLLRRKIKEKRAMLTTTNENDDDNMDIDLENSPIQDSKPSQIVSQTNIYNDLDTILGISLPKKKCTFWLADHVKNSGINIATGSTTIVPSTSSQYATTRNKKASEIKFVESTPDDNVNVTQGKPTHSSVTLKQNVCPKQAVPSVSSSASKGETFSSSSGLDASSNDFENLRQKVRKRNKSQSHIVWSSQSRDVALCLPPNQTSLIGCRTLLLCRRGLSKDIENYCSPQKEDTTHNESPLLDNSSDSSDMDHEGDTKRYQGKDQGRQNFEEASALFKKRFTSLFLIPAIMSNRKPQFTDYFSNNDEIMDTFTDLILDDDDDDDDDDDSEREEDKEKINHKYEGLKQYKKKTRPYLKRSDKACVVDSENTSIDFNKQDCMKDVSLKKLQKKQEETHKKTLYALRPRKKLSNLTDS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01447500; iTF_01449558; iTF_01448496; iTF_01450514;
90% Identity: iTF_01447500;
80% Identity: -