Basic Information

Insect: Timema genevievae
Gene Symbol: SNAPC4
Assembly: GCA_902155825.1
Location: CABFWO010000864.1:52794-59995[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 9.2 3.2e+04 -2.9 0.0 25 37 3 15 2 15 0.89

2 7 2 7e+03 -0.8 0.2 3 18 55 70 53 80 0.88

3 7 0.71 2.5e+03 0.7 0.1 3 19 171 187 169 199 0.88

4 7 1.2e-10 4.4e-07 31.9 0.1 1 45 281 327 281 328 0.95

5 7 4.6e-13 1.6e-09 39.7 0.2 1 43 334 380 334 382 0.96

6 7 8.1e-15 2.9e-11 45.3 0.0 1 46 389 434 389 434 0.97

7 7 3e-13 1.1e-09 40.2 0.8 3 44 444 486 443 487 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	9.2	3.2e+04	-2.9	0.0	25	37	3	15	2	15	0.89
2	7	2	7e+03	-0.8	0.2	3	18	55	70	53	80	0.88
3	7	0.71	2.5e+03	0.7	0.1	3	19	171	187	169	199	0.88
4	7	1.2e-10	4.4e-07	31.9	0.1	1	45	281	327	281	328	0.95
5	7	4.6e-13	1.6e-09	39.7	0.2	1	43	334	380	334	382	0.96
6	7	8.1e-15	2.9e-11	45.3	0.0	1	46	389	434	389	434	0.97
7	7	3e-13	1.1e-09	40.2	0.8	3	44	444	486	443	487	0.96

Sequence Information

Coding Sequence: ATGCAAGCCGTGCCTAAGAAAATGCAAGGTACTACGCCTAAACAATATTCCTGTAAAAAGGATAGCCCAAAAAAAGTATGTCTTATTACTTCTATTGAGAATGATGCTTGCTCTAATGGTAGTAAAGAAGATTTGATGTTTCCTGACGAGAGagatgaaaatacttttacattGGATGAACTTAACAAATTAATCGAGCTTCAGGAAAAGGAAATCGCCTCCTTGAGGAAATGGGATGCACTCCTATCAGAAACTAGCGTCCGTATAATCAACGAAAAGGAGGAGTGCTACCAAGAAGAGAATGAACTCCTACAACACTTTGCAACGAACAAACCTTCGAGACATAGGTCTGCAAACGATGTCACATTTTTTGCCAAAGACAGTTGGGTTTACCTATACGGGGCCCCTTACTTCaaggataaaaattatttccaagcCCCTCCTAATCAAGACGTCCATTTGAAGAAAGCCAGGAATGAGAttaatttgatagatatttccCAGGCCAGGAGGTGGAGAGCCCAAGATAagactattttggaaaaagcgGTAAAGAAACAGGAAATTGAGAAATTACTTGTCAAAAACAAAACAGACGAGCTTACCttattggaaaatttaaaacactgtTCAGAAAAAGACAAAATAACTCTTCAGGGAAAATTGGATGACATAAAGGCTACAGCTGATAATGTTAGCTCCCGGTCGCTGGCGGATTTAGTAGGCAACAAGTGGGTGGAATATGACTGGATGAGGATTTCAGTGACAGACTTTAAGAACCAGCACACGCCAGAGGAGTGCCGCGGAATGTGGTTCGGCTATATTCACCCCGCAATTGTTCGATCTCCATGGACCCATCAAGAGGACATGCGTCTCAAAGAGGTTGCATTGAGCTTCAAATGTCAGGATTGGCAACGGATCGCAGAAAAATTGGCAACGGGCCGCACCGCGTATCAATGCATGTGTCAATATCAGATGCGACTGAATGAAAATTTGAAGCGTGGAAAGTGGACAGACGATGAAGACAGATTGTTGAAGCAGGTGGTGGCAAGATATCGTGTTGGTTCTCATATCCCTTGGTCCAAGGTAGCTATACACATCCCAGACAGGACCAAGGTGCAGATTTTCAACCGCTGGAAGTATTCCATCGCGCCTCACATCAAGAAGGGAAGGTTTACTTCCGGAGAGGACCAGATGATCATAACTGCCTTGCAACGCTACGGCAAAAACTTTAAGCAGATCGCAAGGTTTCTGCCTGATAGGACACCCGTTCAAATTCGGGACCGATATAACTCAAATTTGCAGTACCTTGATCGAAAGGAACCATATAAATGGACTCAAGAGAAAGATCTGAAGTTATTAGAAATGGTGGAACAATTTGGGGACAAGAGCTGGAGTCACATCGCCAAAGAGTTTGTGGGGCACACCCGATCTCATGTCCGCCAGCGCTGGCTTACTATATCCAAGTTCCAGCAAAATAACCCCGATATCAAGGACAGAATGCCAACTGCACGCTTAACCTTCCCTAAGCAACCCGTCTTGAAGAATGTCAAGGCCCTGGAGAAGACCCGCAATCTGGTAAATTTGGGTAGGTCTAATACAGTCTTGAGCGATGAAGCTCTTATTGAAGTTCGAGACGAGCTCGGTCTCGTTGTAAGGAAAAGACCCGGCCGTAAACCAGGCCAAAAGAAAACACTTATACCAGCTGAGGAAGGCTTCATTGACTTTTATCGTGTGGCGTATCAACAGCCGCCTGGTCGTAAGAAAGGTATTTATAATCGAGAGGGGCTACTCAACGAGGCAGAATGTATTAAACAATTTCTCGAGTTCTTTGGCGCCGTGTTGCACATACCGACTGATGATTCTGTTATTAGTGCAGATGTCTGGAACGAAGGCTACCACAACAAAAATATACTCGAAATTTTGCGTGATGGAGATATCTATAACAGTTCAATGTTGATCAAGTTGGAGACACGCAGAAAACTGAAGTTGAGCCAAGAAAAGAGAAGACTCAACTTATTAAGacataaaattaaggaaaaaagagCTATGTTAACTACGACTAATGAAAATGATGATGACAATATGGATATTGATTTGGAGAATTCATCCATTCAAGATTCCAAACCATCTCAAATTGTCagtcaaactaatatttataatgatttggATACCATTCTAGGCATATCCTTGCCTAAAAAGAAGTGCACCTTTTGGTTGGCAGATCATGTTAAAAACTCTGGAATAAACATTGCCACAGGCAGTACAACTATAGTTCCATCCACAAGTAGTCAATCTGCCACTACTAGAAACAAGAAAGCATCTGagattaaatttgttgaaagtaCCCCTGATGACAACGTAAATGTGACTCAAGGAAAACCAACACATAGTTCAGTGATTCTGAAACAAAATGTCTGTCCAAAACAAGCGGTACCTTCGGTTTCTTCATCGGCATCTAAAGGTGAAACTTTTTCCTCATCTAGTGGCCTAGATGCTTCTAGTaatgactttgaaaatttaaggcaaaaggtaagaaaaagaaacaaatcCCAAAGTCATATTGTCTGGAGCTCACAAAGCAGAGATGTAGCCTTATGCCTTCCCCCCAACCAAACCTCTCTCATTGGTTGCCGCACACTCTTGTTGTGCCGTCGTGGACTATCCAAGGACATTGAAAACTATCGCTCGCCACAGAAGGAAGACACAACCCATAATGAGTCTCCGTTGCTTGACAATTCTAGTGATAGCTCCGACATGGATCATGAAGGGGACACCAAGCGATATCAAGGAAAAGATCAAGGCCGTCAGAATTTTGAAGAAGCATCAGctctctttaaaaaaagattcacGTCTTTGTTTCTTATTCCTGCTATAATGTCTAATAGAAAGCCACAGTTTACTGATTACTTTTCAAACAATGATGAAACAATGGATACATTTACAGATTTAATTTTGGACGACGCTGACGAAGACGATGATTCAGAAAGTGAGGAAGATAAAGAAGAAATTAATCATAAGTACGAAGAAAACACGtctattgattttaataaacagGACTGTATGAAGGATGTGTCACTCAAGAAGTTGAAGGAAAAACAAgaagaaacacataaaaaaacactgtatGCTTTACGACCAAGAAAGAAGCCATCTAATTTGACTGACTCATAG
Protein Sequence: MQAVPKKMQGTTPKQYSCKKDSPKKVCLITSIENDACSNGSKEDLMFPDERDENTFTLDELNKLIELQEKEIASLRKWDALLSETSVRIINEKEECYQEENELLQHFATNKPSRHRSANDVTFFAKDSWVYLYGAPYFKDKNYFQAPPNQDVHLKKARNEINLIDISQARRWRAQDKTILEKAVKKQEIEKLLVKNKTDELTLLENLKHCSEKDKITLQGKLDDIKATADNVSSRSLADLVGNKWVEYDWMRISVTDFKNQHTPEECRGMWFGYIHPAIVRSPWTHQEDMRLKEVALSFKCQDWQRIAEKLATGRTAYQCMCQYQMRLNENLKRGKWTDDEDRLLKQVVARYRVGSHIPWSKVAIHIPDRTKVQIFNRWKYSIAPHIKKGRFTSGEDQMIITALQRYGKNFKQIARFLPDRTPVQIRDRYNSNLQYLDRKEPYKWTQEKDLKLLEMVEQFGDKSWSHIAKEFVGHTRSHVRQRWLTISKFQQNNPDIKDRMPTARLTFPKQPVLKNVKALEKTRNLVNLGRSNTVLSDEALIEVRDELGLVVRKRPGRKPGQKKTLIPAEEGFIDFYRVAYQQPPGRKKGIYNREGLLNEAECIKQFLEFFGAVLHIPTDDSVISADVWNEGYHNKNILEILRDGDIYNSSMLIKLETRRKLKLSQEKRRLNLLRHKIKEKRAMLTTTNENDDDNMDIDLENSSIQDSKPSQIVSQTNIYNDLDTILGISLPKKKCTFWLADHVKNSGINIATGSTTIVPSTSSQSATTRNKKASEIKFVESTPDDNVNVTQGKPTHSSVILKQNVCPKQAVPSVSSSASKGETFSSSSGLDASSNDFENLRQKVRKRNKSQSHIVWSSQSRDVALCLPPNQTSLIGCRTLLLCRRGLSKDIENYRSPQKEDTTHNESPLLDNSSDSSDMDHEGDTKRYQGKDQGRQNFEEASALFKKRFTSLFLIPAIMSNRKPQFTDYFSNNDETMDTFTDLILDDADEDDDSESEEDKEEINHKYEENTSIDFNKQDCMKDVSLKKLKEKQEETHKKTLYALRPRKKPSNLTDS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01444709;
90% Identity: iTF_01449558; iTF_01444709;
80% Identity: -