Basic Information

Insect: Timema shepardi
Gene Symbol: SNAPC4
Assembly: GCA_902151425.1
Location: CABFVX010002193.1:87571-96895[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.91 4.6e+03 0.2 0.2 2 17 140 155 139 168 0.88

2 6 0.75 3.8e+03 0.5 0.1 3 19 259 275 257 286 0.90

3 6 4.7e-12 2.4e-08 36.4 0.1 1 45 369 415 369 416 0.95

4 6 1.2e-12 5.9e-09 38.3 0.2 1 43 422 468 422 470 0.96

5 6 1e-15 5.2e-12 48.1 0.0 1 46 477 522 477 522 0.97

6 6 1.9e-13 9.5e-10 40.9 0.9 3 44 532 574 531 576 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.91	4.6e+03	0.2	0.2	2	17	140	155	139	168	0.88
2	6	0.75	3.8e+03	0.5	0.1	3	19	259	275	257	286	0.90
3	6	4.7e-12	2.4e-08	36.4	0.1	1	45	369	415	369	416	0.95
4	6	1.2e-12	5.9e-09	38.3	0.2	1	43	422	468	422	470	0.96
5	6	1e-15	5.2e-12	48.1	0.0	1	46	477	522	477	522	0.97
6	6	1.9e-13	9.5e-10	40.9	0.9	3	44	532	574	531	576	0.96

Sequence Information

Coding Sequence: ATGGATAACAACACGGAAAGTAAGAATGGTGCCGAAATGACAACTCCACTAGAAGTTGAAATATGCTTCTTCGAAGGTGACCAAAACCCAATTACTTTTGATCCCGCGTATGGTGGCCCGCCAATCGACACGCCACCTGCGATTAAAAGAAAGCCGGGTAGACCTCCTAACGTTAATAAAAGAACTACAAATGGCAAGGCTCCGAAAGAAACTAGCGTACGCTTGGAGGATGAAAAAACAGAAATACTCTTCCCTGTCCCGAAAAAGCGAGCCGTGCCTAAGAAAATGCACGGTACTACGTCTAAACAATATTCCTCTAAAAAGGGTAgcccaaaaaaagttattacttCCATTGAGAATGATGCTTGCTTTAATGGCGACATAGAAGAATTGAAGTTTCCTGACCAGAAAGATGAAAATCCTTTTACATTGGATgaacttaacaaattaattgagcTTCGAGAAGAGGAAATCGCCTCCTTGAAGAAATGGGATGCACTCCTATCGGAAACTAGCGTCCGTATAGTCAACGAAAAGGAGAAGTGCTACCAAGAAGAGAAGGAGCTCCTACAACACTTTGCAACGAACAAACCTCTGAAACTGAGACATAAACCTGCAAACGATGTAACATTTTTTGCCAAAGACAGTTGGGTTTACCTATACGGGGCCCCATACTTCAAGGATGGCAGTTTTTTCCCAGCCCCTCCTAACCAAGACGTCCAGTTGAAGAAAGCCAGGAATGAgattaatattatagatatttccCAGGCCAGGAGATGGAGAGCCCAAGATAagactattttggaaaaagcgGTAAAGAAACAGGAAATTGAGAAACTACTTGTCAAAAACAAAACGGATCAGCTTACCttattggaaaatttaaaacaatgtccGGGAAAAGACATAATAACTTTACAGGAAAAATTGGACGACCTAAAGGCTACAGCTGATGAGATTAGCTCTCGGTCGCTGGCAGATTTAGTAGGCGACAAGTGGGTGGAATATGACTGGATGAGGATTTCAGTGACAGACTTTAAGAACCAGCACACTCCAGAAGAGTGCCGCGGAATGTGGTTTGGCTATATTCATCCCACGATTGTTCGATCTCCATGGACCCATCAAGAGGATATGCGTCTCAAAGAGGTTGCATTGAGCTACAAATGTCAGGATTGGGAAAAAATTGCGGAGGATATGGGAACAGGCCGCACCGCATATCAATGCATGTGTCAGTATCAGATGCGACTGAATGAACATTTGAAGCGTGGAAAGTGGACAGATGAGGAAGACAGATTGGTGAAGCAGGTGGTGGCAAGATATCGTGTTGGTTCTCACATCCCTTGGTCCAAAGTGGCTATACATATCCCGGACAGGACCAAGGTGCAGGTTTTCAACCGCTGGAAGTATTCCATTGCACCTCACATCAAGAAGGGAAGGTTTACTTCTGAAGAGGACCAGATGATCATAACTGCCGTGCAACGTTACGGCAGAAACTTCAAGCAGATTGCAAGGTTTCTGCCTGATAGGACACCCATTCAAATCCGTGACcgatataaatcaaatttgcaGTACCTTGATCAAAAGGAACCATATAAATGGACTCAAGAGAAAGATCGGAAGTTAATAGAGATGGTGGAACAATTTGGGGACAAGAGCTGGAGTCACATTGCCAAAGAGTTTGTGGGGCATACCCGCTCTCATGTTCGCCAGCGCTGGCTTACTATAACCAAGTTCCAGCAAAATAACCCTGGAGTCAAGGACAGATTGCCAATTTCACGCTACATCTTCCCTAAGAGACCCGTCTTGAGGAGTGTCAAGGCCCTGGAGAAGACCCGCAATCTGGTAAATTTGGGTAGGTCTAATACATTCTTGAGCGATGAAGCTCTTATTGAAGTTCGAGATGAGCTTGGTCTTGCTGTAAGGAAACGTCCTGGGCGTAAACCAGGTCAAAAGAAAGCACTGATACCAGCTGAGGAAGGCTTCATTGACTTCTATCGTGTGGCGTATCAACAGCCGCCTGGGCGTAGGAAAGGTATTTATAATCGAGAGGAGCTACTCAATGAGGCAAACtgtattaaacattttctcGAGTTCTTCGGCGCCGTGTTGCACATACCAACTGATGAATCTGCTATTGGTGCAGATGTCTGGAATGAGGGCTACCAGAACAAGCAAATACTCGAAATTTTGCGTGATGGAGATATCTATGACGATTCAATATTGATCAAAATGGAAACACACAGAAAACTCAAGTTGAGCCAAGAAAAGAGAAGGCTCTATTCACTaagatgtaaaattaatcaGAAAAAAGCTTTGACTAATGAAAATGACAATGACAATACGGATATTGATTTGGAGAATTCACCCGTTCAAGATTCCAAACCATCCCAAAATGTCAgtcaaactaatatttataatgatttggATACAATTCTAGGCATATCCTTGCCTAAAAAGAAGTGCACCTTTTGGTTGGCAGAACATGTTATAAATTCTGGAATAAACATTGCCACAGGAAGTGCAACTATTGTTCCATCCACAAGTAGTCAATCTGCCACTAATAGAAACAAGAAAGCatctaatattaaattagtagaAAGTAGCCCTGTTGATAACGTAAATGTGACTCAAGAAAAACCAACATGTAGTTCAGTGactgttaaacaaaataatgtccCTCCAAAACAAATGGTACCTTCAGTTTCTTCATCGGCATCTAAAGGCAAAACGCTTTCCTCGTCTAGTGGCTTTGATGCTTCTAGTAGTGACTTTGAAAATGTAAGGCAAAAGGTAATATTAAGAAACAAATCCCAAAGTCATATTATCTGGAGCTCACAAAGCAGAGATGTAGCCTTTTGCCTTCCCCCCAACCAAACCTCTCTCATTGGTTGCCGCACACTCTTGTTGTGCCGTCGTGGATTATCCAAGGACATTGAAAACTTTCATTCATCACAGAAGGAAGGCACGACCCAAAATGAGTCTCTGTTGCTTAACAATTCTAGTGATAGCTCCGACTTGGATCATGATGGGGACACCAAGCAATATCCAGGAAAAGATCAAGGCCGTCAGAATTTTGAAGAAGCATCAACTCTCTTCAAAAAAAGATTCACGTCTTTGTTTCTTATTCCTGCCATAATGTCTAATAGAAAGCCACAGTGtactgatttattttcaaacgatGAAACAATGGATACCTTTACAGGTTTAATTTTGAAGAACGATGATTCTGAAAAAAACACTTCTATTGATTTGAGCGACAGTGTTCATGAACAGGACTGTATGAAGGATGTGTCACTCAAGAAGTTGAAGAAAAAACAAGAAGCAACACACAAAGAAACATTGTATGCTTTATGA
Protein Sequence: MDNNTESKNGAEMTTPLEVEICFFEGDQNPITFDPAYGGPPIDTPPAIKRKPGRPPNVNKRTTNGKAPKETSVRLEDEKTEILFPVPKKRAVPKKMHGTTSKQYSSKKGSPKKVITSIENDACFNGDIEELKFPDQKDENPFTLDELNKLIELREEEIASLKKWDALLSETSVRIVNEKEKCYQEEKELLQHFATNKPLKLRHKPANDVTFFAKDSWVYLYGAPYFKDGSFFPAPPNQDVQLKKARNEINIIDISQARRWRAQDKTILEKAVKKQEIEKLLVKNKTDQLTLLENLKQCPGKDIITLQEKLDDLKATADEISSRSLADLVGDKWVEYDWMRISVTDFKNQHTPEECRGMWFGYIHPTIVRSPWTHQEDMRLKEVALSYKCQDWEKIAEDMGTGRTAYQCMCQYQMRLNEHLKRGKWTDEEDRLVKQVVARYRVGSHIPWSKVAIHIPDRTKVQVFNRWKYSIAPHIKKGRFTSEEDQMIITAVQRYGRNFKQIARFLPDRTPIQIRDRYKSNLQYLDQKEPYKWTQEKDRKLIEMVEQFGDKSWSHIAKEFVGHTRSHVRQRWLTITKFQQNNPGVKDRLPISRYIFPKRPVLRSVKALEKTRNLVNLGRSNTFLSDEALIEVRDELGLAVRKRPGRKPGQKKALIPAEEGFIDFYRVAYQQPPGRRKGIYNREELLNEANCIKHFLEFFGAVLHIPTDESAIGADVWNEGYQNKQILEILRDGDIYDDSILIKMETHRKLKLSQEKRRLYSLRCKINQKKALTNENDNDNTDIDLENSPVQDSKPSQNVSQTNIYNDLDTILGISLPKKKCTFWLAEHVINSGINIATGSATIVPSTSSQSATNRNKKASNIKLVESSPVDNVNVTQEKPTCSSVTVKQNNVPPKQMVPSVSSSASKGKTLSSSSGFDASSSDFENVRQKVILRNKSQSHIIWSSQSRDVAFCLPPNQTSLIGCRTLLLCRRGLSKDIENFHSSQKEGTTQNESLLLNNSSDSSDLDHDGDTKQYPGKDQGRQNFEEASTLFKKRFTSLFLIPAIMSNRKPQCTDLFSNDETMDTFTGLILKNDDSEKNTSIDLSDSVHEQDCMKDVSLKKLKKKQEATHKETLYAL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01444709;
90% Identity: -
80% Identity: -