Tcit030425.1
Basic Information
- Insect
- Tiliacea citrago
- Gene Symbol
- -
- Assembly
- GCA_963921375.1
- Location
- OY992797.1:9312345-9313541[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-12 7.8e-10 40.4 0.0 5 107 41 141 38 144 0.91
Sequence Information
- Coding Sequence
- ATGACAGTGGTGACGAACCCCGCGCGGACCAACTCGGACGATGAGATCGAGTCGGGGCGCGAGAGCGACGTGTGCGAGTACGGCGGCGCCGGCGTGGACCTGGACGAGCACGCGCGCCTGTACGACGACGAGAAGCAGTCCGACATCGTGTTCGTGGCCGGCATCAATGGGGACACGTGGCGCTACCCTGGTCACCGCCGCGTGCTGGCCGCCACCAGCCCTGTGTTCGCCGCGCTGCTCGCCTGCAAGACCGACGTCATCGTCGTCGACTACATTGACCGTCGCGGCTTTGAGCAGCTGCTTCGCTACCACTACTGCGAGCCCACCCAGCTTAACTCCGTGGGCACAGCGCGCTGCGCATTAGACGCCGCGTATAAGTTCCTGTGCTCACCGCTGGCAGAGCGATGCGCTCGGCGCCTAGACGATATGTTGGATGCCGGTGTCGCGCTAGAGATACTGCGCGACTTACGATTCCTTTGCGCCAGGTTACCCGGCGCTGCCTCCGCACCACCATTGCCCGCTCTATCAGACGACGCGGCAGCTCGCTCGCTCGCACAATGTTCCCGCTGGTGCGACTCTCTGGCTCACAACGCTCTGCTGGTGCTCGATGATGACGCAGATACCGCCCTGACTGATGAACGTCTGGAAGAGCTAACGTATGAAGACTTATCGCTTATAGTAAAACGAGATACTTTGCGCGTGTCGAGTGAACTGGTGCTGGCAGAGGCTCTGACGCGGTGGGCCACAGCAGCTTGCAAACGTACCAAGCGCGAGCTAACGCCCGCCAACAAGAGGGCGGCGCTTGGCGAGCTCGCGTACTGCCCGCGGTACCTGCTGCTGTCGGGCGACGAGTTAGACCGCGCTCTGAGCCTGGAGCTGCTGGAGCCGATGGAGCGTGCGCTGGTGACAGCACGCGCTCGCAAGCTGTCTGCGCCGGTGCCGGTCGGCGCGGAGCAGGAGGCGCTGCTGCGGCGCTGGGCCCGGCCGCGGCCCGTTGAGCCGGCGGCGCTGCCCGTGCATCTGAGCGCACGCTCCGAGCCGCCCGTGGAAGAGCCGCAGCCCAGCAAGCTGTGCGCGCGCCGCCCCAAGCGCCCCAAGCAGCCCAGCTTCGCGCCAGAAGAAAAACGCAAAAAGAAAGGCTGCTGCGCATGTTTCGGAGAGGGACTCTTACGTGCTTTCATTTGTTTGTTCGACTGA
- Protein Sequence
- MTVVTNPARTNSDDEIESGRESDVCEYGGAGVDLDEHARLYDDEKQSDIVFVAGINGDTWRYPGHRRVLAATSPVFAALLACKTDVIVVDYIDRRGFEQLLRYHYCEPTQLNSVGTARCALDAAYKFLCSPLAERCARRLDDMLDAGVALEILRDLRFLCARLPGAASAPPLPALSDDAAARSLAQCSRWCDSLAHNALLVLDDDADTALTDERLEELTYEDLSLIVKRDTLRVSSELVLAEALTRWATAACKRTKRELTPANKRAALGELAYCPRYLLLSGDELDRALSLELLEPMERALVTARARKLSAPVPVGAEQEALLRRWARPRPVEPAALPVHLSARSEPPVEEPQPSKLCARRPKRPKQPSFAPEEKRKKKGCCACFGEGLLRAFICLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00736766;
- 90% Identity
- iTF_00111842; iTF_01118503; iTF_01117531; iTF_01119549; iTF_00667714; iTF_01064837; iTF_00449350; iTF_01026502; iTF_01028488; iTF_00810283; iTF_01030416; iTF_00177361; iTF_00120700; iTF_00888444; iTF_00809341; iTF_00018334; iTF_01027518; iTF_01029438; iTF_01247294; iTF_01440262; iTF_00726631; iTF_00017512; iTF_00383877; iTF_00712104; iTF_00952008; iTF_00124457; iTF_00850953; iTF_01031297; iTF_00851989; iTF_00300416; iTF_00906346; iTF_00623010; iTF_00907212; iTF_00042829; iTF_00374389; iTF_00072234; iTF_00172014; iTF_01526250; iTF_00037996; iTF_00039021; iTF_00037008; iTF_01527510; iTF_00364215; iTF_00041070; iTF_00041968; iTF_00043741; iTF_00237934; iTF_00831406; iTF_00928879; iTF_01063922; iTF_00071668; iTF_00973952; iTF_00425622; iTF_01062999; iTF_01340407; iTF_01339112; iTF_00758442; iTF_00745968; iTF_01094226; iTF_01095126; iTF_00924952; iTF_01093306; iTF_00121629; iTF_00122590; iTF_00123552; iTF_00273786; iTF_00274587; iTF_01425275; iTF_00772188; iTF_00685630; iTF_00040063; iTF_00908095; iTF_00375505; iTF_00173248; iTF_01062048;
- 80% Identity
- -