Tcit033420.1
Basic Information
- Insect
- Tiliacea citrago
- Gene Symbol
- retn
- Assembly
- GCA_963921375.1
- Location
- OY992799.1:16710212-16717811[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-20 4.3e-16 60.5 0.0 17 89 21 91 7 91 0.92 2 2 3.8 2.5e+04 -2.8 0.0 25 38 219 232 181 233 0.56
Sequence Information
- Coding Sequence
- ATGCCACTATTAATAGAGCGACAGCTCATGGCTGCCAACTTATTTAATAACCAAATACCAGGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTATGAGCTGTACAACCTGGTGATAGCTCGTGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGACTGCGGCTACCGTCGTCCATCACGTCTGCTGCCTTCACGTTACGCACACAGTACATGAAATACCTGTATGACTATGAGTGCGAGAAGAAGAACCTATCCACCAGGAGTGAGCTGGACGCAGCCATCGAAGGGAACAAACGTGAGGGACGTCGCGCCTCTGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCACTTGGAGGTGTCGCACCACGcttgccgccgctgccgccgcacGCGCCCCATCTCGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCAGAATCGCCCCCTAATAATGGTCCTGCTCCAATAATGTCTCCTCGTGACGCAGCCGCACTTAGTGCCATCGATGTCTCCCGCCTCACTCTCTGGTCGCTctacaacaataacaacaacagcCCACAACCGGACCTCGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCACTGACGAGCAGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCTGCTAAGCGCCGCACGCCGCGCCCCACGTCGCGCCCCCCCTCGCGCCCCCCCTCGCCGCGCTCCGACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCAGGGATACCACATCACCGCCACAGATCAACGGCATGCCGAATTCCAACGGTGTCAATGGAGCTGCCTTCAAGATTACTACTAGAGGAGACGCGAGCACAGGTGACCAGCAACTGGTAGTATCAATAGAGCTGAATGGAGTAACGTATGAAGGAGTACTCTTCCCTTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGTcttaa
- Protein Sequence
- MPLLIERQLMAANLFNNQIPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSLTSSGKREACRSPAPPAKRRTPRPTSRPPSRPPSPRSDLHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -