Taur014418.1
Basic Information
- Insect
- Tiliacea aurago
- Gene Symbol
- retn
- Assembly
- GCA_948098905.1
- Location
- OX402593.1:17276807-17285974[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-20 5.2e-17 62.6 0.0 15 89 66 138 49 138 0.92 2 2 7.3 1.6e+04 -3.0 0.0 25 38 266 279 228 280 0.56
Sequence Information
- Coding Sequence
- ATGGTGACCATTACAACGTCATGGCATAGAAAAGTTACACATAATCTTGCACATCAAAGCGAGGTGCACTATCAAAAGATGACCAGCGTATCTTGGCCTTTGTACCCTTTAAGTTGTATAGCTTCTGCTGATTTAACAGAAACTAATGAAGCTTTCTTAGGTAGTGCTATTCATCAAAATGCAAAATTGGATTTGAATCAAGGTACTCCAATCAACCGGCTACCGATAATGGCGAAGTCAGTGTTAGACCTGTATGAGCTGTACAACCTGGTGATAGCTCGTGGCGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTACCGTCGTCCATCACGTCTGCTGCCTTCACTTTACGCACACAGTACATGAAATACCTGTATGACTATGAGTGCGAGAAGAAGAACCTATCCACCAGGAGTGAGCTGGACGCAGCCATCGAAGGGAACAAGCGTGAAGGACGTCGCGCCTCTGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTTGGAGGTGTCGCACCACGCTTGCCGCCGCTGCCGCCGCACGCGCCGCATCTCGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCCGAATCGCCCCCTAACAATGGTCCTGCTCCAATAATGTCTCCTCGCGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTCTACAACAATAACAACAACAGCCCACAACCGGAACTCGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTCTGACGAGCAGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCACGTCGCGCCCCCCCTCGCGCCCCCCCTCGCCGCGCTCCGACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCAGGGACACCACGTCACCGCCACAGATCAACGGCATGCCCAATTCCAACGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGAGGAGACGCGAGCACAGGTGACCAGCAACTGGTAGTATCAATAGAGCTGAACGGAGTAACTTATGAAGGAGTACTCTTCCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MVTITTSWHRKVTHNLAHQSEVHYQKMTSVSWPLYPLSCIASADLTETNEAFLGSAIHQNAKLDLNQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPNSLTSSGKREACRSPAPPAKRRTPRPTSRPPSRPPSPRSDLHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -