Tact015543.6
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638222.1:13308844-13326319[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 7.4e-05 0.007 17.7 1.5 1 23 212 234 212 234 0.96 2 20 0.0026 0.24 12.8 0.6 1 20 240 259 240 262 0.94 3 20 9.4e-05 0.0089 17.3 5.3 3 23 283 303 281 303 0.97 4 20 3.2e-05 0.003 18.8 4.6 1 23 309 331 309 331 0.99 5 20 3.2e-05 0.003 18.8 5.3 1 23 337 359 337 359 0.97 6 20 1.5e-05 0.0014 19.9 7.2 1 23 365 387 365 387 0.97 7 20 6.1e-07 5.8e-05 24.2 2.9 1 23 393 415 393 415 0.97 8 20 8.7e-05 0.0082 17.4 6.7 1 23 421 443 421 443 0.97 9 20 8.6e-05 0.0081 17.5 6.5 1 23 449 471 449 471 0.97 10 20 4.2e-07 3.9e-05 24.7 1.9 1 23 477 499 477 499 0.98 11 20 4.2e-05 0.004 18.4 7.9 1 23 505 527 505 527 0.98 12 20 6.8e-06 0.00064 20.9 6.6 1 23 533 555 533 555 0.98 13 20 6.2e-06 0.00059 21.1 5.0 1 23 561 583 561 583 0.98 14 20 0.00023 0.022 16.1 5.4 1 23 589 611 589 611 0.97 15 20 0.0001 0.0096 17.2 7.5 1 23 617 639 617 639 0.97 16 20 2.6e-06 0.00025 22.2 6.0 1 23 645 667 645 667 0.98 17 20 3.5e-05 0.0033 18.7 10.2 1 23 673 695 673 695 0.97 18 20 2.4e-05 0.0023 19.2 4.5 1 23 701 723 701 723 0.96 19 20 0.00062 0.059 14.8 0.3 1 23 730 752 730 752 0.96 20 20 0.039 3.7 9.1 5.4 1 23 761 783 761 783 0.99
Sequence Information
- Coding Sequence
- ATGAGTAGCAGACAAGGGAAGAATATGCAAATCCAATTGACTGTGAGTGAAGATGGGATTGTCACAGTGGTGGAGCCAAGTGCAAACAAACTAGTGGACAAGGAGGATCTCCATGAGACTATCAAGTTGCCCACAGACCATACTCTCACCGTGCATCAGTTGCAACAGATTGTAGGGCATCATCAGGTGATAGATAGCGTGGTCCGGATAGAGCAAGCGACGGGCGAGCCGGCCAACATCCTGGTGACGCAGAACCCGGACGGCACCACGTCCATCGAGACGAGCGCCGCCGACCCGCTCGCTATAGTCAAGGACGAGAAGGCAGGCTCCAAGATAGAGGGCGCCCAGTTCGCTATACCGGCCGAGATTAAGGAGATCAAGGATTTGAAGAGTGTCGGAGCCATGGGGATGGAAGGAGCAGTGGTGAAGATATCAGCGGGCGCGAACGAACACGATCTACACGCCATGTACAAGGTTAATGTCGAGGATCTGTCGCAACTGCTCGCCTACCATGAAGTGTTTGGGAAACTCAATACGGAGGGGCAACAGCAACAAGCTAAGGTCATCACAGAAGTTGAGACGGAAGCCAGTACGAGCGCAGCGATGTCGGAGGCGGACTCCTCGCCCGGCCATCACGCTTGTGACATATGCGGGAAGATATTCCAATTCCGTTATCAGCTTATTGTTCATAGACGGTACCACGGAGAGAACAAACCATATACCTGTCAAGTATGTGGTTCCGCATTCGCGAACCCTGTAGAATTATCAAGACATGGGAAATGTCATTTAGCGGGCGACCCAGCCGAGAGACAGACGAAGCGGTTGACGCAAGACAAGCCATACGGCTGCTCCACCTGCCATAAGACATTCTCCAGGAAGGAACACCTCGATAATCACGTTCGAAGTCACACTGGTGAAACACCTTACAGGTGTCAGTACTGCGCGAAGACGTTCACCCGCAAGGAGCACATGGTGAACCATGTGAGGAAGCACACCGGTGAAACCCCGCACCGGTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAACACTTCATGAACCACGTCATGTGGCACACTGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAGGGAGCATTTAGTGAACCATATGAGGTCACATACAAACGATACTCCGTTCCGCTGCGAACTGTGCGGAAAGTCTTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCACACGGGTGAAACTCCGCACCGGTGCGACTTCTGCTCGAAGACGTTCACGCGCAAGGAGCACCTGTTAAACCACGTGCGGCAGCACACGGGCGAGTCCCCGCACCGGTGCAACTTCTGCTCCAAGTCGTTCACGCGCCGCGAACATCTCGTCAACCACGTGCGGCAACACACCGGTGAAACTCCCTTCCAGTGCGGCTACTGTCCGAAAGCTTTCACTAGGAAAGATCACTTGGTGAATCACGTACGTCAACACACGGGCGAATCGCCGCACAAGTGTTCGTTCTGCACAAAGTCGTTCACCCGCAAGGAGCACCTGACGAACCACGTGCGACAGCACACCGGTGAATCGCCGCACCGGTGCACGTATTGCGCCAAGTCGTTCACCAGGAAGGAACATCTCACCAATCATATCAGACAGCACACTGGTGAAACGCCGCACAAGTGTACGTACTGCCCGCGCGCGTTCTCGCGGAAGGTGCACCTGAACAACCACGTGCGACAGCACACTGGCGACACGCCGCACTCGTGCACCTTCTGCGCAAAAAGCTTCACGCGCAAGGAGCACCTCGTCAACCACGTGAGGCAACACACGGGCGAAACTCCGTTCAAGTGTACTTTCTGTACGAAGTCGTTCTCGCGGAAAGAACACCTGACGAACCACGTCCACTTACATACGGGAGAGACTCCGCACAAGTGTCCTTTCTGTACCAAGACCTTTTCACGGAAGGAGCATCTCACTAACCATGTCAGGATACACACAGGTGAATCCCCTCACCGGTGCGAGTTTTGTCACAAAACGTTCACCCGCAAGGAGCACCTAACGAACCACATGAAGCAACATACGGGCGACACGCCGCACGCTTGTAAGGTGTGTCTGAAGCCTTTCACCAGGAAAGAACACCTCAGTACCCATATGAGATCGCACAGTTGCGGCGAAAGGCCGTTCAGTTGCGGCGAGTGCGGCAAGTCGTTCCCATTGAAGGGCAATCTCCTGTTCCACGAAAGATCGCACAATAAATCGAGTAGTACTAGACCTTTCCGATGTGATGTCTGTTCTAAAGATTTCATGTGTAAAGGTCACCTAGTGTCGCACAGACGGACGCACGCGGAGGCCGGCGACGCCGCTAGCGCCGAGCCGCCGGCGGAGGCCGAGGACTGTGGCGACTGCATCAAGTGCGAGAAGGAGGCGCCCGACCGCCCCGAGCAGAAACACGATGTCAGGGCATCTTCTGAAAACAGACCTACAGAAAACAGTACAGCACAAACGCAACAAACCAACACAGCTGTGATGCAAATCACCAGTCAACAAGTACGTACAGCAGCAGCGAGCAACGCAACAAGCGTAGCTACAGCGACGTTCACGCACACGGCGAGCCCGCAGCACCACGCCAGCGCCGCCATCGCGCACCATCCCGTTACCGTTAACTACTAA
- Protein Sequence
- MSSRQGKNMQIQLTVSEDGIVTVVEPSANKLVDKEDLHETIKLPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLAIVKDEKAGSKIEGAQFAIPAEIKEIKDLKSVGAMGMEGAVVKISAGANEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQQQQAKVITEVETEASTSAAMSEADSSPGHHACDICGKIFQFRYQLIVHRRYHGENKPYTCQVCGSAFANPVELSRHGKCHLAGDPAERQTKRLTQDKPYGCSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKVHLNNHVRQHTGDTPHSCTFCAKSFTRKEHLVNHVRQHTGETPFKCTFCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHMKQHTGDTPHACKVCLKPFTRKEHLSTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSSSTRPFRCDVCSKDFMCKGHLVSHRRTHAEAGDAASAEPPAEAEDCGDCIKCEKEAPDRPEQKHDVRASSENRPTENSTAQTQQTNTAVMQITSQQVRTAAASNATSVATATFTHTASPQHHASAAIAHHPVTVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00289860;
- 90% Identity
- iTF_00970589;
- 80% Identity
- -