Tact026523.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638233.1:14454988-14458083[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-09 6e-06 26.8 0.0 3 35 10 43 8 46 0.87
Sequence Information
- Coding Sequence
- ATGTCTAAAAAACGACAATACGGCAAAGATACAATAGATAAGGCTCTTAAATTTATTGAGGATAAAGAGGGTTCAATTCGACAGGCGGCAAAAAAATTTGGTGTGCCTAGAAGTAGCCtccaatttaaaattcaaaatcctGACACAAAATTTAAGTCTGGACCAGATCCAGTGCTAACTGAAGCTGAAGAAAACAGTTTATGTGACTTTATCATACAACTGTCAAAGCGTGGTTTCCCAAGAAAGAAGGAGGATATCCAATTGTGTGTCCAGAATTTTTTGCAACAAAATCCAAGACCCAACCCCTTCCGAGACAACAAACCGGGAGATGTGTGGTTTAAGGCTTTCCTGAAAAGACACCCTAATATTTCTATTCGAACATCGGAAGGAGTTACCAATGCAAGTGCATGTGTTTCTGAACAGGATATTCGGAAATGGTTTCAGGAAATACAGCGGTATATTGTCGAGGAAGAACTAAATGACGTCATTCAAGATCCCATAAGAGTTTTCAATGCCGATGAAACTGGATTCAATATTTGCCCGAAAACAGGCAAAGTACTGGCTGAGAAAGGGTGCAAAAATGTGTACCAGATAGAAAAAGGATCCTCTAAAGAAaacattacagttttatttacgtTTTCTGCTGCTGGACATGTCTTTAGACCAATGATTATCTATCCTTATAAACGGATTCCTGACCGAGTTTCGTTGAGTGTGCCATCTGGTTGGGGAATAGGGCGAAGCGACACAGGTTGGATGACTGCTGCGGTTTTTCACGATTATATCTCTAACTGCCTGTACCAACAAATTTTAGAAAGCAATATCCCACTTCCTGTAATTCTGTTTGTTGATGGACACAAAACCCATATAACTATAGAAGTATCAGAACTATGCCGCCGTCTTCAAATACATCTAATAGCGCTTTATCCGAACGCAACTCGCATATTACAACCAGCAGATATTGCAGCTTTTCGTCCTATAAAGGTTGCTTGGAAGAAGGCACTGCGCGATTGGCACGCTGCGAATAATTACCAGAAGAGTTTGACTAAAGAAACCTTTGCTCCACTTTTAAAAACAGTTGTAGACTTGTATTCTAAGAAAGAGACATTAATAAATGGATTCAGAATATCCGGTTTGTGTCCATTTGAACCAAACAATGTCGATTTTAGCAAGTGCATTGCAAGAGTAAACCAACCCGATAATAAATCCATGTCAGAAACAAATGTTGAGAATAATATGAGAGTGCTGACCTATTCAGAGTTTTGTAACATTGTTGGTGAATCAATTCTTAAAAAATGTCGAACAGTCTCGTCCATTTTAGAGTcagatgataattttattgcaatttataatttatggCGAAGATTTGAGGCTGCAtcggaaaacaataataattacaaaagtaATAATGATGTGGACCGTGAACCTTTTGACCAACCGACCATAATCGTAGAAGACAATCATGTGACTGATATTATAGAAGAAGACGAAAACCCTAAGACGATTCTTGATGAATTTACAGatttaAGTAAGAAAAAGCCCCGTTTCTGTAGTGTATGTATGTCGGGTATGTTCGCGATCTCACGTGTCGACTGTTTTTATGCCACTATGCGCAAAAGATGTGGCTCCCTGGTGCGCCGGTTGCGGGACAGCTCCAACAGCATCCTGAATATGATCGCTAGCAGGTTAGACTGCAGATATGTGAGACATTGCTGTGCTGTTTCAAATGGAATGGCACAGCGGTGA
- Protein Sequence
- MSKKRQYGKDTIDKALKFIEDKEGSIRQAAKKFGVPRSSLQFKIQNPDTKFKSGPDPVLTEAEENSLCDFIIQLSKRGFPRKKEDIQLCVQNFLQQNPRPNPFRDNKPGDVWFKAFLKRHPNISIRTSEGVTNASACVSEQDIRKWFQEIQRYIVEEELNDVIQDPIRVFNADETGFNICPKTGKVLAEKGCKNVYQIEKGSSKENITVLFTFSAAGHVFRPMIIYPYKRIPDRVSLSVPSGWGIGRSDTGWMTAAVFHDYISNCLYQQILESNIPLPVILFVDGHKTHITIEVSELCRRLQIHLIALYPNATRILQPADIAAFRPIKVAWKKALRDWHAANNYQKSLTKETFAPLLKTVVDLYSKKETLINGFRISGLCPFEPNNVDFSKCIARVNQPDNKSMSETNVENNMRVLTYSEFCNIVGESILKKCRTVSSILESDDNFIAIYNLWRRFEAASENNNNYKSNNDVDREPFDQPTIIVEDNHVTDIIEEDENPKTILDEFTDLSKKKPRFCSVCMSGMFAISRVDCFYATMRKRCGSLVRRLRDSSNSILNMIASRLDCRYVRHCCAVSNGMAQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00726279; iTF_00786699; iTF_01021128; iTF_01020217; iTF_01020216; iTF_01020218; iTF_01020219; iTF_01085113;
- 90% Identity
- iTF_00726279;
- 80% Identity
- -