Mmin007243.1
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- -
- Assembly
- GCA_034621355.1
- Location
- CM067887.1:13388398-13398935[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 2.2e-06 28.0 0.0 3 35 60 93 58 99 0.92
Sequence Information
- Coding Sequence
- ATGACGTTTGTATTCATATCTTCCGTCCATTTCATGCGCCGCACTCCACCGACGGCGGGCTCCGAAGGTTGGATCCTAGTGGATCCTGTCGAAGCCAAGCCCTCCGGTGGTGATGATGGAAGGGTCGACTGGCCAGttcatGTTAGTAAAATGTCTAAAAAACGACAATACGGCAAAGAGACAATAGATAAGGCTCTTAAATTTATAGAGAATAAAGAAGGTTCAATTCGACAGGCGGCAAAAAGATTTGGTGTGCCTAGAAGTAGCCTCCAATTTAAAATTCGAAATCcggaaacaaaatttaaatctgGACCAGATCCAGTGCTAACGCTAGTTGAAGAAAATAGTTTAAGTGAATTCATCATCCAGCTATCAAAGCGTGGTTTCCCAAGAAAGAAGGAGGATATACAATTGTGTGTCCAgaattttttacaacaaaatcCGAGACCCAACCCTTTCCGAGACAACAAACCGGGGGATGTGTGGTTCAAGGCTTTCCTGAAAAGACACCCAAATATTTCTATTAGAACATCGGAAGGAGTTACCAATGCAAGTGCATGTGTTTCTGAACAGGATATTCGGAAATGGTTTCAGGAAATACAGCAGTATATTGTCGAGGAAGAACTAAATGACGTCATTCAAGACCCCATGAGAGTTTTCAATGCCGATGAAACTGGTTTCAATATTTGCCCCAAAACAGGTAAAGTACTGGCAGAGAAAGGGTGCAAAAATGTGTACCAGATAGAAAAAGGATCCTCAAAAGAAAAcattacagttttatttactttctcTGCTGCGGGACACGTCTTTAGACCAATGATTATCTATCCCTATAAACGTATACCTGATCGAGTTTCGTTGAGTGTGCCATCTGGTTGGGGAATAGGGAGAAGCGACACGGGTTGGATGACTGCAGCGGTTTTTTATGATTATATCTCAAACTGTCTGCACAAACAAATTTTAGAAAGCAATATACCACTTCCAGTAATTCTGTTTGTCGATGGACACAAAACCCATATAACTATAGAAGTGTCAGAACTATGCCGCCGTCTTCAAATACATCTAATAGCGCTTTATCCAAACGCAACTCGCATACTACAACCAGCAGATGTTGCAGCTTTTCGCCCAATAAAGGTTGCTTGGAAGAAGGCACTGCGTGATTGGTACGCTGCGAATAATTACCAGAAGAGTTTAACTAAAGAAACCTTTGCTCCACTGTTAAAAACAGTTGTAGACTTGTGTTCTAAGAGAGAAACATTAATAAATGGCTTTAGAATAACCGGTTTATATCCATTTGAACCAAATAATGTCGATTTTAGCAAGTGCATTGCAAGAGTAAACAAACTCGATAATACACCAACATCAAAAACAAATGTTGAGCATAAAATGAGTGTGCTGACCTATTCAGAGTTTTGCAACATTGTTGGCGaatcaattcttgaaaaatgtCGAACAGTGTCGTCCATTTTAGAGTcagatgataattttattgcaatttataatttatggcAAAGATTCGAGGCTACACcggaaaacaataataattatagaagtAATATTGACGTGGACTATGAACCTTTGGACCAACCGACCATAATCGTAGAAGACAATGATGTGACTGATATTATAGAAGACGAAAACTCTAGGGTGATTCTTGATGAATTTACAGAATTCATGTACCTGTGGAATATGAAGATCCATTTATGTGTCACATTTGCTATAGAGAAAGTAACACTGACTCATCTGACGGTGAGTGTGATGCCATATTTAGCTCTGTTTGTGCAGAAGCACGAAAGCACGGCTTCGGCTAATTTAATTCTATAA
- Protein Sequence
- MTFVFISSVHFMRRTPPTAGSEGWILVDPVEAKPSGGDDGRVDWPVHVSKMSKKRQYGKETIDKALKFIENKEGSIRQAAKRFGVPRSSLQFKIRNPETKFKSGPDPVLTLVEENSLSEFIIQLSKRGFPRKKEDIQLCVQNFLQQNPRPNPFRDNKPGDVWFKAFLKRHPNISIRTSEGVTNASACVSEQDIRKWFQEIQQYIVEEELNDVIQDPMRVFNADETGFNICPKTGKVLAEKGCKNVYQIEKGSSKENITVLFTFSAAGHVFRPMIIYPYKRIPDRVSLSVPSGWGIGRSDTGWMTAAVFYDYISNCLHKQILESNIPLPVILFVDGHKTHITIEVSELCRRLQIHLIALYPNATRILQPADVAAFRPIKVAWKKALRDWYAANNYQKSLTKETFAPLLKTVVDLCSKRETLINGFRITGLYPFEPNNVDFSKCIARVNKLDNTPTSKTNVEHKMSVLTYSEFCNIVGESILEKCRTVSSILESDDNFIAIYNLWQRFEATPENNNNYRSNIDVDYEPLDQPTIIVEDNDVTDIIEDENSRVILDEFTEFMYLWNMKIHLCVTFAIEKVTLTHLTVSVMPYLALFVQKHESTASANLIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01437914;
- 90% Identity
- -
- 80% Identity
- -