Ttri036146.1
Basic Information
- Insect
- Therioaphis trifolii
- Gene Symbol
- TFIP11
- Assembly
- GCA_027580255.1
- Location
- CM050404.1:87122926-87128924[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-78 1.3e-73 249.4 18.2 5 275 386 650 383 650 0.97 2 2 0.25 5.9e+03 -2.1 0.1 234 260 654 680 651 692 0.65
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAAATGGAAAAATTTGAAATCACCGACTATGATTTGGACAACGAGTTTAACATGAACAGACCTCAAAGACGGTTGACCAAAAATCAAGCAATTTATGGAGTTTGGGCCGATGAAGAAGGAAGTGATGAGGAACCATCTGGTTTTGGTGGACGCAGAAAAAAAGATAAAAAATATAAACAAAACTATACTACTCCAGTTTCATTTGTAGCTGGAGGTATTCAACAATCTGGCAAGGACAAAAAAGAAATTAAATCAGAAGAAAAAAAAGATAGTGAAGTAGAAAACATAGATGACAATATATCCACATCTAGTGAAGAAGAAAAACCTGCCTTCAGTTTTGATATTGACCAAGAATTGGCAGGTTTACGAAAAAAACGATCACAAGCTAGTTCTTCAAGACTTATGAACAAAGGATTAGGAGATTGGGAAAAACATACAAAAGGAATAGGTGCAAAATTATTGCTTGGGATGGGTTACCAACCAGGTCATGGTTTAGGAAAAAAACTTCAAGGTATAACAGCTCCAATTGAAGCAAATTTAAGAAAAGGAAGAGGAGCAATTGGTGCATATGGTCCCGAGTCTAAAAGCAAACCCATGAAAGTAGATAGTGAGCGAATGTCAGAGAAATCAAAAGATAATAAGGTACCTTCAACTGGATGGCGTAAAGCTCTAAAAACAGAAAAAACACAGTATATATATAAAACAGCTGAAGAAGTTATTGAAGAGAGCAAACAACCAGGACAAAGAAAAAGAGAATTCAATGAATTGAGTAGAGTAAAAGTAATTGATATGACTGGTCCAGAACAAAGAGTTTTATCTGGATATCATGCTATATCTGGTGTTAAGAAACCTATAGATCAATGGGAAGTACGAAAGGATAAAAAATTCTCAAATTTTGATTTACCTGAATTATTACACAATCTCAATCTTTTAGTGAATATATCAGAACAGAGCATAATATCAAATAATCAAGAACTTTGTAATAGTGAAGATCGACTTATTGTCATTGAACGAGAAACTAATAAATTAGAAGAAGATATAAAAGAAAAAGATAAATCAATCCAATCTTTAGAAAACATGATCGTCATTATGGAATCTTTAAGTGATGCAGCAAAAAAAAATATGTTAGATAGTAATAAAGCTATAAAATGTTTAACAGAATTAAAAGAAGATTATTATCCAGATTACCGACTAAATGGTGGGTCAGTTTTTGCATTATCAATTTCTCAAATATTAATGAAAGCAAAGCTGTCTACTTGGGATCCACTACAAGATCCAACAATGCCTTTTGAAGAACTTAAAAAGTGGAAAGAATTATTAACTTTAAATGATCCATGTGCTATTGGATATCAATCAAGTGACGAATTTCAATCATTAATTTGGCAAGAATGGGTACCTCAAGTTCAGAAAGCATGCGGGCAGTGGAACTGTCGAGATTATAATACTATGTTGAAACTCGTTGAACAATCAACTGAATTGATACCAAATGACATCATCACTAAAGTTCTCGAGAATATGATATTACCAAAAATACAATCAGAAGTTGAACAATGGGATCCACTGACTGATCTAGTGCCAATTCATTTATGGATTCACCCATGGTTACCATATTTAAGCAAACATTTTGAAACTATTGTCTATCCTACTCTGAGACAAAAATTAAGTGTAGCATTAAATGCTTGGCATCCATCTGACAACTCTGCTAAACTAATGCTCCAACCATGGATTAATGTTTTCCAGCAAGGCTATATGGAAGCATTTTTGATAAAAAACATTGTTCCTAAATTGCAAGCAGCTCTTCAAACATTTGTAATCAATCCTCATCATCAACAATTAGACAATTGGAATTGGGTGAATTCATGGGCAGATTTGTTACCATTACCTACATTAGTTGAATTGTTAGACCAACATTTCTTCCCAAAGTGGCTTAAAACACTTACCATGTGGATAAATATGAATCCAAATCATGAACAGATAAGTAATTGGTATACTGGATGGAAGTCTTTAATGCCTGCTATAATTGTTGAACACCCAACAATTAAAGGACGATTTCATTCTGCTTTGGATATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACTACCACCACCCCCTCCTACAATTCAAGGCGGTCTAGCTGAAGCTGTACGTACGGCATCACAGATGCCACATGGCTTTAAAGAATTGGTGCAAAAGCGGTGTGAGGAACGAGGTATTTTGTGGATGCCGATTCCTGGTCGTTTTAGAGAAGCTAAACAAGTTTTCAGATGTGGAGCAAGACTTCAAGCATATATTGACCGTGGAGTTTTATTTGTTAGTCAAGATGGTTCTAATTTTAATCCAATGTCTGTACAGTCTATGTTAGAACTATGTGAATAA
- Protein Sequence
- MSDDEMEKFEITDYDLDNEFNMNRPQRRLTKNQAIYGVWADEEGSDEEPSGFGGRRKKDKKYKQNYTTPVSFVAGGIQQSGKDKKEIKSEEKKDSEVENIDDNISTSSEEEKPAFSFDIDQELAGLRKKRSQASSSRLMNKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGITAPIEANLRKGRGAIGAYGPESKSKPMKVDSERMSEKSKDNKVPSTGWRKALKTEKTQYIYKTAEEVIEESKQPGQRKREFNELSRVKVIDMTGPEQRVLSGYHAISGVKKPIDQWEVRKDKKFSNFDLPELLHNLNLLVNISEQSIISNNQELCNSEDRLIVIERETNKLEEDIKEKDKSIQSLENMIVIMESLSDAAKKNMLDSNKAIKCLTELKEDYYPDYRLNGGSVFALSISQILMKAKLSTWDPLQDPTMPFEELKKWKELLTLNDPCAIGYQSSDEFQSLIWQEWVPQVQKACGQWNCRDYNTMLKLVEQSTELIPNDIITKVLENMILPKIQSEVEQWDPLTDLVPIHLWIHPWLPYLSKHFETIVYPTLRQKLSVALNAWHPSDNSAKLMLQPWINVFQQGYMEAFLIKNIVPKLQAALQTFVINPHHQQLDNWNWVNSWADLLPLPTLVELLDQHFFPKWLKTLTMWINMNPNHEQISNWYTGWKSLMPAIIVEHPTIKGRFHSALDIMSRAVGGPSMPLPPPPPTIQGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPIPGRFREAKQVFRCGARLQAYIDRGVLFVSQDGSNFNPMSVQSMLELCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037788;
- 90% Identity
- -
- 80% Identity
- -