Tuni060619.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949987705.1
- Location
- OX465284.1:111403971-111415452[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.023 1.7e+03 0.0 2.7 28 82 44 96 39 124 0.72 2 2 7.7e-111 5.8e-106 356.2 34.8 1 299 161 445 161 446 0.92
Sequence Information
- Coding Sequence
- ATGGATTTTCGTGaaattgatggtgatgaaacaAGCAAAAATGTCGATTTGTTGTTGTTAACCCAACAAAGTGATCCTAACGACAACAGTGAATGCTCCGAAGAGTTTGATTTTAGTGATAACGATTTCAAGGAATTGGATAATGATAACGATGTTAACTTCAATCTTCAGTCAATATCattaaatgataaaaacaaCGACAgtaaagaagaaagttatattaaaaataataatacaaaatccAATcgtatagaagaagaagaagcagaagaTAGTGTAGAGTTTAGTGATAATAACATAGAAAATATCAACGATAAAACATCGATTCCAACAGAGAAAATCATCGAAACTGTTAATGAAGATCTACAAAAGAATCATGATACGAAAAATATAGTTGCAGTTTGCAGCGATGATGATACATATTATAGCGATgaagaaaatgaatttgttgttaattttttagATCAAGTTAATGAAATTGCGGAGGCACGACTTGCAGCACGCCGTCAAGCACGTGCCGAGGCCAGGGAAATACGAATGCGTGAACTGGAACGCCAACAGAAGGAACAAGAACAAAATGCTGATAGGGTATTCGACATGCAAACAGCATCTTCAATGGATCCTTTATCTAGATCACGACTTACAATGTCGGGCAACACTGTGCGAGCTAGTTCGATGTCATCCAGGCGAAGTAGTGAAGATTCCCTAGAGGAGGAGGGTCGAAGTTTGCGTGATATTAGGCATGAACTTAAGGATGTGGAAGAACGATTTAGAAAAGCGATGATAGCAAATGCACAACTAGATAATGAAAGGGCCTCACAATCGTACCAAATTCAACTGCTTAAGGATAAACTGGAGGAAATGGAGGAGTCATACGCTCAGCTTAGCCGGGAATATAAGGAGAAATGCCGTGATCATAATGCTTTAAAGcgtaatttcgataaattagaagaagaattaaaattagTTCGAGGACAGCTAGATGAAAGGGATACTCTTATAGCTGAACAGGGATTAGTCATAGTATTGCTAGAAAATGAAGATGGCTCTGATGCCAGACGTGCTCTAGTCAGTATGGAGAACGCACAACTTCTAGGTTCTGTCCAGGGTTCTTTAGATGTTCGACTGAAAAAATTCACTGAAGAAAAGCAGCAACTTCAGAAGGAAGTTCAAAATCTACAGCAGCAATTAAGCGACGTTAAATTACAAGGTCGACGTGGTGGATCAATGAACGGCCCATTGGCAGGAGATGATGACTATGATGCTCAAAGAGAAGCAAACAAACTATTAGCTGATTATAAATATAAACTGCAGAAAGCAGATCAAGAAATAGCTAGTCTTCAAGCCAGTTTAGCGAGGTCCGAAACGCAAGTTATAAGATATAAGAGTACCGCCGAAGCAGCCGAAAAGGCGGAGGCTGAATTAAAAATTGAGCGAAGAAAGCTTCAAAGAGAGCCTATAGATTTTAGTTACTGGGATGAATGCCATTGCCAATAA
- Protein Sequence
- MDFREIDGDETSKNVDLLLLTQQSDPNDNSECSEEFDFSDNDFKELDNDNDVNFNLQSISLNDKNNDSKEESYIKNNNTKSNRIEEEEAEDSVEFSDNNIENINDKTSIPTEKIIETVNEDLQKNHDTKNIVAVCSDDDTYYSDEENEFVVNFLDQVNEIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTASSMDPLSRSRLTMSGNTVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESYAQLSREYKEKCRDHNALKRNFDKLEEELKLVRGQLDERDTLIAEQGLVIVLLENEDGSDARRALVSMENAQLLGSVQGSLDVRLKKFTEEKQQLQKEVQNLQQQLSDVKLQGRRGGSMNGPLAGDDDYDAQREANKLLADYKYKLQKADQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQREPIDFSYWDECHCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01430848;
- 90% Identity
- iTF_01430848;
- 80% Identity
- -