Basic Information

Insect: Thalpophila matura
Gene Symbol: -
Assembly: GCA_948465475.1
Location: OX419178.1:6505121-6510212[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.17 11 7.0 3.4 2 22 182 202 181 202 0.95

2 15 0.069 4.7 8.2 2.6 1 23 299 321 299 321 0.95

3 15 0.48 33 5.5 0.3 2 23 459 480 458 480 0.96

4 15 0.00091 0.062 14.1 0.5 2 23 560 581 559 581 0.96

5 15 0.27 18 6.3 1.2 1 23 589 611 589 611 0.97

6 15 4 2.8e+02 2.6 2.6 1 23 647 669 647 669 0.93

7 15 0.00019 0.013 16.2 4.0 1 23 677 699 677 699 0.99

8 15 0.18 12 6.9 1.8 1 23 784 806 784 806 0.98

9 15 5.3 3.6e+02 2.3 1.5 1 20 862 881 862 884 0.90

10 15 0.0089 0.61 11.0 2.6 1 23 979 1001 979 1001 0.95

11 15 0.0044 0.3 12.0 1.1 1 23 1007 1029 1007 1029 0.96

12 15 0.0054 0.37 11.7 2.6 1 23 1120 1142 1120 1142 0.97

13 15 0.00014 0.0093 16.7 1.4 1 23 1148 1170 1148 1170 0.99

14 15 0.27 18 6.3 2.9 1 23 1261 1283 1261 1283 0.96

15 15 0.0079 0.54 11.2 5.6 1 23 1294 1316 1294 1316 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.17	11	7.0	3.4	2	22	182	202	181	202	0.95
2	15	0.069	4.7	8.2	2.6	1	23	299	321	299	321	0.95
3	15	0.48	33	5.5	0.3	2	23	459	480	458	480	0.96
4	15	0.00091	0.062	14.1	0.5	2	23	560	581	559	581	0.96
5	15	0.27	18	6.3	1.2	1	23	589	611	589	611	0.97
6	15	4	2.8e+02	2.6	2.6	1	23	647	669	647	669	0.93
7	15	0.00019	0.013	16.2	4.0	1	23	677	699	677	699	0.99
8	15	0.18	12	6.9	1.8	1	23	784	806	784	806	0.98
9	15	5.3	3.6e+02	2.3	1.5	1	20	862	881	862	884	0.90
10	15	0.0089	0.61	11.0	2.6	1	23	979	1001	979	1001	0.95
11	15	0.0044	0.3	12.0	1.1	1	23	1007	1029	1007	1029	0.96
12	15	0.0054	0.37	11.7	2.6	1	23	1120	1142	1120	1142	0.97
13	15	0.00014	0.0093	16.7	1.4	1	23	1148	1170	1148	1170	0.99
14	15	0.27	18	6.3	2.9	1	23	1261	1283	1261	1283	0.96
15	15	0.0079	0.54	11.2	5.6	1	23	1294	1316	1294	1316	0.98

Sequence Information

Coding Sequence: ATGGGTCTACAGTACGCAGAGAGAGAACTTGTCGGTTGCAAAAGTGATTCCAATGACGCTACAGCTTCCGACGCAAACACCAAAAGAGACGCTTCGCAAGATGGATATAACCAGCTATCTCCTACTCATAGCGCAGACGAAAAGCTACAAAAACAAAACAGAAAGATTCCCAGACCAATACCACAACTCATCCCGTTAAATTCTTCTACCCCTAACCAAAAACAAACATGTTCCGGTGAACCGCCCCATAAGAAGTTCAAGGAATCTTTTCCCGCCGAAATTGATGATTTATCTGGTGATAATATTCTAATACCCACAAATCCATCAATAAAGGAAACTTCAGGGCGAAAGAAGAATGAATCGTTCTTCGACAGATTGAAAGAAAGACTGTTAACAGAAACAGGTAAAGAAGGCTCTCTTATATGCAAAAACTGTGGATTTGAAAGTAAATGTCTATCAGAACATTCGGTGCATGAAAAAAATTGCTCACCACAAACTAACAGGATCAATGCAAACACGTCGCTCAAAAGTTTAAGTTCAACTCGATGCCAAAATTGCAGACACAGGTGTAAATCTAGCGCAGACTTGTACATCCACATGCAAACGTGCGGAAAAAGCGAAAATATGGATGACGAAAACACTGTTAAAAATCAAGATAGTAATGATGGAGTCATTCCAATCCATGAAAAAGAGACTGAACCGCATCCAATGGAAAACGTCGTTTTCGTTTGGAACAATATTAATCATGACCCTAACAAGTTTGATGTACCTCTAGACATAAATATAAACGATGATTGCACTCTACCCGCCATACACAGGAATTTCGATGCTGAGATAGTTGATGAAAATGAAAGTATGAATTTGTCACCAAGTCAAGCTATTGGAAGGAAGGTATTTAAATGTCCACATTGCCCATTTTTCTCTACAACAGCATCCAGATTTCACGTTCATATCGTTGGTCATTTAAACAAGAAACCATTTGAATGTTCCCTCTGCAAATATAAATCTAATTGGAGGTGGGATATAACCAAACATATTAAATTGAAATCTGCGAGGGATCCTGAGCACAACGAAGCAAAAGTACTAATGACTGATGAAACAGGAAGAAGAAATTATAGCAAATATAACAAATTCTTAGCAATGCCTGTTTTAAATGAAAATGGTGAAAATGAGTTCCATTACTTGGATCCTAATACTGCCGTCGATGGCACGATGGAAATGGATGAGTCATTTAATGATAATATATCAGACGTAATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACAGTGAAGATAAGTACGACTATATTGATAACAGAGGTCTTAATGACATGAAAAAACCTAAGAAAACATTATGGAAATGTAAAAAATGTAATTACAAAGATCCTTCAAAAGAAGCTCTATTAGAGCATGTTCGTGAACACTCCAGATCGGATGGCATCCATGACGAAGCAAACAAACAACCTATTAAGAAACCTGAAAATAATACTCCCGATCCAGCCGACCTGGCGTATCGTTGTGGTCATTGTAATCAATTGTCTAATTGGAAACATGTCATCCAGCGTCATTGCCGATTAAAACATGATGGAGTGATAAAAGTCATAACTACAGTTAAGCCAAAACCTGACCCACCAATGAACATAAATGAGATCAATATTGATACTTGCAACAAATGTCCGTACAGAACGAGTGACAAAAAACTACTTATTGCTCATTTGCAACAACATCAGCCCTCGCCGAACTCTATTTTCAAGTGCTATTTCTGTCCATTCTTCGTAAAGGATGAACCAGAATTAATCCAACATCTACACCTTCACGGTATCACAGACCCAGAAGATTACATTGCAAGAGCAATGGGAACCAAATCCCCAGCGCCAGAACCGCAAGCACCTATTACGCCGTCATTAAACTCCAACAAGCGTCACAAATGCATAGAATGTCCATACGAAACAAACAGCAAGTCGCAATTCATGTACCACGAACAATTTCATCGACTTCCGGCGGATACCCCTTATAAATGTCCAGAATGCAACTATAGCGTATCTAAGAGACACCTGCTGCACCAGCACCTGCGAGTACACGGAATCGCAACCAAAAGAATTGAAACCGAGGCTGAATTAGAAGCATCAACATCTGCACAAAACAAGACCGAACTGAAAATTGAGTTCCATATTAATCTTGATGAAATACCATATGTTTGGGTCTCAGCGAAGAACGAGTTTCATAAAATGTACAAGTGCCGCTACTGTTCATACGTTAATTCCGTAAAATGTAAAATACCAAATCATGAAAAAATTCATTGCATCGTGTTTGAAAATAATGATACAACAATTTACAAGTGTTTGGAATGCAAATTTACATGTGATAACGCCGGCAGGCTAGCCGAGCATTCCAAGTCACATGGGGAAATATATGGGCGCATTTATTGTCCTGTTGAACATGATGTGCCCGATGAGGAACAGATCACTAAATTGAGAAAAGTAATAGAAATTGAAAAATCTGCTAATCCAGAAAGTTTTTCTAGAGATGAAAGCTCTACAAACGAAAATAGAGAAATAAAATTATTGTATTTTTGTCAAAAGTGCCCGGCTAGATTTTTTGAAGACGGCGAACTGGAAATTCATGAAAAATGTCATGATTTAGCACTACCGATTAAATGTAAAAGTTGCGAGTTTTCAGTCACCGAAGATAATGCATTGGCGGCACATAATACAGTTCACACAGATGAATATCACACAAAAACGAAGATGCTTAAATTTATTCACCACTCGCATCCTTCGCACAGACAACCCATACTAGAACTTCTTCACTGTCCAACGACTTCAGAGGTTACGTGGATAGCTACTGGTCCAAGTAAACCTGAAAATATCGAAAGTCCTATGAAAAAAATCAATGATACAAAAAACGTGCCAAAACAATATTGTTGCAAACAATGTCCGGCAAAGTTTTTCAAAAGTTCTGCGCTTACCTATCACATGGGGCTACATGGAGGTGAAGGCGAGCATAAGTGCAAGAAATGTAACTACGCTGTAAAGAATATTGGAAATTTAGCCAAACATGAATTACTTCACGAAAAAAATGAAAACAAGGCAACCAGTTGTGATTATGAATCTGGTGAAGATATGGACTATAAAAATATTCCATTGTCGGGCACAGATCTGTTCCAGAGAAAGACTGAGGCTCAGAAAAGAGTTTTAACTGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTTCCGCCAGTTCTACAAGCCGATCCTCAATTCGGTTATTTAATGCATGGTAATCCTGAATTTATATATCCCACGTACCTAAAAAATGGACGTCAAAAAGAAAAGCGATATAAATGCCACAAGTGTCCCTCGGCTTTTGAAAAAAGAGAACAATATAAAATTCATTTATCATTGCATGGCTCCAAGCAAAGATATAAATGTGAGTTGTGTGATTATTCAGTAAAGTATTACGCTAATTACGTTCAACATATGAGGAAACATCAAATGAACGATGAAGCTCAAGCTGAAAGGAAGAAAGGTAGTGATTTTATAGAATCTGAAAATCAAGAAGACGTTAAGCAAGACGACAGTAGTGATAATATTAAACTTGCAATAAAAACTATGCCAAAAGGGGCTCCTAAGAGTGACTTCCAACAATTCTCAATTAGCGACCAGCAAACACTCAGGCTGCTCCAGCGAAGACGATCAATGAATCATTCTGGAAAGGACATACATGCATCTGAAAATTCGCCGATCAAAGAGCGTAAAATGCACATGTGTCTATTATGTCCCTACACTAATCAACGTCAAGATTCTTTAACTAATCATTACCGACGGCACGGTGACACCGATATTCTGAATGCTGGAAGTCATAAATGTTCGCATTGCGACCTTGTGGTTGTGCAATCACATTTCCTCCGAGAACATCTGAAGACCCATTTCAACTACCACAAAACTCTTTTTCCCGATTGTTTTGTAGCTAATGAAGATGTCAGTTTTACCATAACCAAGTTGGATGAAGACAGTAAGTCAGTTGATCTCAAATTAGACATGCAAAACAAGAGTTTTACATGTAATGATGAAAAGATATTTGTGAAAATTAAAACTGGAGAACTGATGGTGGAATAA
Protein Sequence: MGLQYAERELVGCKSDSNDATASDANTKRDASQDGYNQLSPTHSADEKLQKQNRKIPRPIPQLIPLNSSTPNQKQTCSGEPPHKKFKESFPAEIDDLSGDNILIPTNPSIKETSGRKKNESFFDRLKERLLTETGKEGSLICKNCGFESKCLSEHSVHEKNCSPQTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSENMDDENTVKNQDSNDGVIPIHEKETEPHPMENVVFVWNNINHDPNKFDVPLDININDDCTLPAIHRNFDAEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTAVDGTMEMDESFNDNISDVMNVQFEMQPLNLQTQHSEDKYDYIDNRGLNDMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSDGIHDEANKQPIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLHLHGITDPEDYIARAMGTKSPAPEPQAPITPSLNSNKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRIETEAELEASTSAQNKTELKIEFHINLDEIPYVWVSAKNEFHKMYKCRYCSYVNSVKCKIPNHEKIHCIVFENNDTTIYKCLECKFTCDNAGRLAEHSKSHGEIYGRIYCPVEHDVPDEEQITKLRKVIEIEKSANPESFSRDESSTNENREIKLLYFCQKCPARFFEDGELEIHEKCHDLALPIKCKSCEFSVTEDNALAAHNTVHTDEYHTKTKMLKFIHHSHPSHRQPILELLHCPTTSEVTWIATGPSKPENIESPMKKINDTKNVPKQYCCKQCPAKFFKSSALTYHMGLHGGEGEHKCKKCNYAVKNIGNLAKHELLHEKNENKATSCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSDFIESENQEDVKQDDSSDNIKLAIKTMPKGAPKSDFQQFSISDQQTLRLLQRRRSMNHSGKDIHASENSPIKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDILNAGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLFPDCFVANEDVSFTITKLDEDSKSVDLKLDMQNKSFTCNDEKIFVKIKTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -