Tmat016770.1
Basic Information
- Insect
- Thalpophila matura
- Gene Symbol
- retn
- Assembly
- GCA_948465475.1
- Location
- OX419191.1:6205689-6215901[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-19 5.9e-16 59.0 0.0 17 89 79 149 67 149 0.92 2 2 5.8 1.3e+04 -3.0 0.0 25 38 277 290 239 291 0.57
Sequence Information
- Coding Sequence
- ATGGGCGGTCGGGCCGTGCTCGCGAACGCCTCTCATTGGCCCGCCGCGGGGTTGTCGGGCATCAAGGGCCTTGATACTGCTCTCGATAAGCGGGAGGCGTCGAATGTCGATTCGATCGATTATCGCCCGTGTCGTCGCGCGCCGGTGACCGCGACGCCCGCGCCGGATGCACGCACCGCGCCACTCTGCTGCACTACACTTGACATTTTGATGACCCACGCCGCGTCATTAATACGAACCCCAATCAACCGGCTACCAATAATGGCGAAGTCGGTGTTAGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTGATCAACAAGAAGTTGTGGCAGGAGATCATCAAAGGGCTGCGGCTGCCGTCCTCCATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTACGACTATGAGTGCGAGAAGAAGAACCTATCAACCAGGAGCGAGCTGGACGCAGCCATTGAAGGCAACAAGCGCGAGGGGCGCCGCGCCTCGGGGCAGTACGACGCACAAGCTGCATTAGCCATGCCCCCTCTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGGGGCGTGGCGCCGCGCCTGCCGCCGCTGCCGCCGCACGCGCCGCATCTCGCGCAGCACGACATCGAGTATAGGGTGCGAGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCCGAATCGCCCCCTAGTAACGGTCCAGCCCCAATAATGTCTCCACGTGACGCAGCCGCCCTAAGTGCTATCGACGTATCCCGCCTCACTCTCTGGTCGCTCTACAATAACAACAACAACAGTCCACAACCAGAACTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCTCGCGCCCCGCCTCGCCCCGCAGCGACCTGCACTCGCCGCCCGCGCACCGCCACAGCCGCCGCGACACTACGTCACCGCCGCAGATCAATGGCATGCCCAACACTAACGGAGTCAATGGAGCTGCTTTCAAGATTACCACCAGAGGTGACGCGAGCACAGGTGACCAACAGCTCGTGGTGTCAATAGAGCTGAACGGCGTCACGTATGAAGGCGTGCTCTTTCCCTCAGGCAACGGCCAGAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MGGRAVLANASHWPAAGLSGIKGLDTALDKREASNVDSIDYRPCRRAPVTATPAPDARTAPLCCTTLDILMTHAASLIRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPASRPASPRSDLHSPPAHRHSRRDTTSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -