Tdiv001104.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetrapedia diversipes
Gene Symbol
tfip11
Assembly
GCA_033822845.1
Location
JAOPTO010000297.1:8057-11383[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-103 1.1e-99 334.2 17.5 1 275 392 659 392 659 0.99
2 2 0.017 1.7e+02 2.4 0.1 244 272 673 701 664 704 0.86

Sequence Information

Coding Sequence
ATGTCGGAAGACGAAGTAGAAAGTTTTGAAATTACGGATTACGATCTGGATAATGAATTTAACATTAATCGCCCTAGGCGTAAATTAACCAAAAAGCAGCAAATGCTTGGTATTTGGGCTGATGATAGCGACGAAGACGAATTATCTGCTAGACCATCGTTTAAAACTTTCGATAAAGGTccaaaaaattatacaacCCCTGTAAATTTTGTAGCAGGTGGCATTCAACAAGCTGGAAAGCCAAAAAATGAAACAGATGATAAAGATGATAATGAAAGCGAGGATGAGGGTGCAAATAAAAGAGAATTTCCAAATAGTTCAAGTTCTGAAGATGAGAGGCCAACTTCTATGCATCAACGTACATCATTTTCATTGAACACTGATGGAGACATTGCAGGTTTACGCAAAAGGAAGCAAAAAGTAAATCCCTTACTGATGCAAACTGGGATGGGTAGCTGGGAAGTATATACAAAGGGTATTGGAGCTAAGTTGTTACTACAGATGGGCTTTGAACCTGGAAAAGGTTTAGGTAAACAATTGCAAGGTATAAGTGCACCAGTAGAAGCACACTTGAGGAAAGGCAGAGGTGCAATTGGTGCTTATGGCCCAGAAAAAGGTCCAAAAGTgccagaaaagaaaaaagacgaTGAAACAGAAGACGGAAAGGAATCCAAAGCTAAGTTATCACAATGGAGAAAAGGAGATGGTAGTGTTGCtaagaaaaaagtaaattatgtATACAGAAGTGTTGATCAGGTTTTAGAAGATGGCAAATTGAAACCTAACAAAAAAGTGAGAATATCCAATGAAATGAGTAGGGTTAAAGTCATTGATATGACTGGGCCAGAACAAAGAATTCTTAGTGGATATCATGCAATCGCTGGAGGTCAGCAAAGACCTGATGAAACTGTTGTTGTTACTGATAAAAAGTCCAAAGTTAATTTTGCATTACCTGAACTTcaacataatttgaatatactTGTGGATATGTGTGAACAAGATATTATACAAAACGATAGACGGACGAGACATTTGAGTGATAGAGTGGTTGCTTTAGAAgctgagaaaaaaaatttatctaAAGTTATAGATCAACATGGTCAATTGATAGATACCTTAGAAAACGTTCTCGCAATTGTAGACAGATTGATGGATGAAACGAACCAATTAACATTACAAGAAACTGCAGATGCTTTCAAAGACTTACAGGATAAATATTATGAggaatataaaatgtatgaaCTTGGTGAATTAGCTAGTAGTTTTGTTGGTCCAAAAATAAAAGACTGCCTTGTTAGTTGGAATCCATTAATGCAACCTAAGCAACCTATCAAATTATTTGAACAATGGAAGAGTATTTTAGAAAGCGGTAGTACCACCCTTCAAACAAGAACTATGCATCCGTATGACCAGCTTGTATGGAATTCATGGATGCCATCAATTAGAGGGGCAACACAACAATGGACATGTAGACAACCCGATTCATTAATCGAATTGATAGAGCACTGGATGCCATTACTTCCAAATTGGATATTAGATAATATTTTAGATATGCTAATTCTTCCTAAACTTACATTGGAAGTAGAAGAATGGAATCCTCTTACCGATACAGTACCCATTCATACTTGGATTCATCCCTGGTTACCGCTGTTAAGAAATCGTTTGGATACCTTGATATATCCAATAATAAGACGTAAACTAGGATCTGCTTTGGGTGGTTGGCACCCGTCCGACAGATCCGCTAGGCTAATGTTACAACCGTGGTCAAATGTCTTTGCAAAAGGAGACATGGAAGCTTTCCTAGTGAAAAATATCATTCCTAAATTACAAATTGCACTATCTGAATTTGTGATAAATCCACATCAACAACATTTAGACCAATGGAATTGGGTATATGAATGGAAGGAATTAATTCCGACTCATATAATGGCAAGCTTACTAGATAAATTTTTCTTCCCCAAATGGTTACAAGTTTTAGCTCTTTGGCTAAATCATTCTCCTAACTATGATCAAGTTACGAATTGGTACATAGGATGGAAAAACATGTTGAGCGAAAAAATATTATCTGAACCATTGGTGAAAGAACATTTCAAGAAAGCATTAGATATGATGAACAGAGCAGTGTCCGGACCGCAAAGTCATCAACCGGGTGCGATGGAACAAGTTTCTTATTTAACAAGTTTAGAAAGGACTCAACCTACCATGTCTCAAATGCCACCAACTGCGCAGCCGAGAATGGAGagACTTGCTGAAGCAGTTAGAACAGCGTCACAGATACCTCACGGTTTCAAAGATCTCGTTCAAAAGAAATGCGAAGAAAGGGGTATTTTGTTTATGCCAATACCAAACCGATACAGAGAAGCAAAACAAGTTTACAAAGTGGGAAATGTTCAAGCTTATATAGACGGAAACGTTGTATTCGTCTGTCATAATGGCATGAATTGGATGCCAACGCATTTAAACGCTTTACTGGACATGTCCGAAATCTAG
Protein Sequence
MSEDEVESFEITDYDLDNEFNINRPRRKLTKKQQMLGIWADDSDEDELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKNETDDKDDNESEDEGANKREFPNSSSSEDERPTSMHQRTSFSLNTDGDIAGLRKRKQKVNPLLMQTGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKGPKVPEKKKDDETEDGKESKAKLSQWRKGDGSVAKKKVNYVYRSVDQVLEDGKLKPNKKVRISNEMSRVKVIDMTGPEQRILSGYHAIAGGQQRPDETVVVTDKKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHGQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKIKDCLVSWNPLMQPKQPIKLFEQWKSILESGSTTLQTRTMHPYDQLVWNSWMPSIRGATQQWTCRQPDSLIELIEHWMPLLPNWILDNILDMLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSNVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPTHIMASLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYIGWKNMLSEKILSEPLVKEHFKKALDMMNRAVSGPQSHQPGAMEQVSYLTSLERTQPTMSQMPPTAQPRMERLAEAVRTASQIPHGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIDGNVVFVCHNGMNWMPTHLNALLDMSEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00118005;
80% Identity
iTF_01424378;