Basic Information

Insect: Tetramorium simillimum
Gene Symbol: -
Assembly: GCA_011636635.1
Location: VBVQ01001087.1:8572-13958[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.1 12 7.1 3.1 1 23 495 517 495 517 0.97

2 19 0.018 2.1 9.5 0.5 2 23 554 575 553 575 0.96

3 19 0.0011 0.13 13.3 1.1 1 23 642 664 642 664 0.95

4 19 0.00039 0.046 14.7 1.2 1 23 667 689 667 689 0.98

5 19 7.7e-05 0.0091 16.9 1.0 2 23 737 759 736 759 0.95

6 19 0.0045 0.53 11.4 1.0 1 23 765 787 765 787 0.96

7 19 0.00024 0.028 15.4 1.1 1 20 793 812 793 817 0.94

8 19 0.00029 0.035 15.1 0.8 1 23 891 913 891 913 0.97

9 19 0.00022 0.026 15.5 5.0 1 23 967 989 967 989 0.97

10 19 0.00031 0.037 15.0 0.7 1 20 994 1013 994 1015 0.94

11 19 0.052 6.2 8.0 0.3 2 23 1026 1047 1026 1047 0.97

12 19 3.2e-05 0.0037 18.2 0.6 2 23 1086 1107 1085 1107 0.97

13 19 2.9e-05 0.0034 18.3 1.6 1 23 1112 1134 1112 1134 0.95

14 19 0.0012 0.15 13.2 1.7 1 20 1140 1159 1140 1162 0.93

15 19 5.1e-06 0.0006 20.7 0.4 1 23 1178 1200 1178 1200 0.95

16 19 5.7e-07 6.7e-05 23.7 0.6 1 23 1206 1228 1206 1228 0.98

17 19 4.5e-05 0.0053 17.7 0.2 1 23 1234 1256 1234 1256 0.97

18 19 0.027 3.1 9.0 6.9 1 23 1262 1284 1262 1284 0.96

19 19 0.0057 0.67 11.1 0.6 1 20 1290 1309 1290 1311 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.1	12	7.1	3.1	1	23	495	517	495	517	0.97
2	19	0.018	2.1	9.5	0.5	2	23	554	575	553	575	0.96
3	19	0.0011	0.13	13.3	1.1	1	23	642	664	642	664	0.95
4	19	0.00039	0.046	14.7	1.2	1	23	667	689	667	689	0.98
5	19	7.7e-05	0.0091	16.9	1.0	2	23	737	759	736	759	0.95
6	19	0.0045	0.53	11.4	1.0	1	23	765	787	765	787	0.96
7	19	0.00024	0.028	15.4	1.1	1	20	793	812	793	817	0.94
8	19	0.00029	0.035	15.1	0.8	1	23	891	913	891	913	0.97
9	19	0.00022	0.026	15.5	5.0	1	23	967	989	967	989	0.97
10	19	0.00031	0.037	15.0	0.7	1	20	994	1013	994	1015	0.94
11	19	0.052	6.2	8.0	0.3	2	23	1026	1047	1026	1047	0.97
12	19	3.2e-05	0.0037	18.2	0.6	2	23	1086	1107	1085	1107	0.97
13	19	2.9e-05	0.0034	18.3	1.6	1	23	1112	1134	1112	1134	0.95
14	19	0.0012	0.15	13.2	1.7	1	20	1140	1159	1140	1162	0.93
15	19	5.1e-06	0.0006	20.7	0.4	1	23	1178	1200	1178	1200	0.95
16	19	5.7e-07	6.7e-05	23.7	0.6	1	23	1206	1228	1206	1228	0.98
17	19	4.5e-05	0.0053	17.7	0.2	1	23	1234	1256	1234	1256	0.97
18	19	0.027	3.1	9.0	6.9	1	23	1262	1284	1262	1284	0.96
19	19	0.0057	0.67	11.1	0.6	1	20	1290	1309	1290	1311	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTGGAGATAAATACGTCGGGTCCGTCGCAGGGCGAGGACGCGGTCGGCTCCGCCGTGAAGATATGCCGCGTCTGCCTGCTCGGCGACCTCGTGATGCGCGACCTCTTCGCGGAGAGCGAGGTCGCGTCCCTGTCGGCGAAGGCGATGAGCTTCGCCAGCGTTAAGATGTTACCAGGTGATGGTCTACCAGCACAGGTGTGCTACATGTGCGCCGACAAGTTGGAGTCAGCATACGAGTTTAAGTTACAAGTGGAGCAAGCCGACAATGTTCTTCGAGAAAAGCTTGTCGGCAGAATAATAAAGGAGGAGCTGTTTCTTAATGAAGTTGAAATACACTTGGATGCCGAGAGGAATGACGGTATTGATGAGATGAATGTCAGTGCTGATTATGAATCTGGTACCACCGCAGTACTACCAGTGGAGTCGGCGGCTGACaagaattttctgaaaaatcagTTAATGATTTTGGAAGCTGAAAAATTGGCAGAGACTGAGGAAATGCAACAAGATCCGGAACAAGATAACTCGGAAGAAATCACGCAAGAAAGCATTGTAGAAGAATTTCAGCAAGAATTAGCCGGTGCGGACGATACTGATATGTCAGATGATATTGATGAATCTAGAGACGAAGAACTTTCCAACGAgaatattattcgaaattgCACAGATGCAATTCCAACAGAGGAACATGATTACATTATGCAGCAACAATGTATATTGCCTGCTGAACAACTTTCCTTGCAAGAAGAAATGCAGGAAGAAATGCGGGAAGAAATGCAGGAAACTGTACCAAAACTTGAACAAGACACTAAGATGCAGTGCCAAGAGATACTATCTGAACAAACCCAAGAAATTCAAGCTGAACAATGTCAAGAGATTCAAGCGGAGCAAATTCACGAGACTCAGGCTGAGCAAGAGATTCAAGCTGAACTAAATCAAGAGATTCAGGATGAACTAAATCAAGAGATTGAAGCTAAACTAAATCAAGAAATTCAGgctaaattaaatcgagaaatTCAGGCTAAATTAAATCTAGAGATTCAGgctaaattaaatcaagagaTTCAGGCTGAACTAAATCAAGAGATTCAACCTGAACTAAATCAAGAGATTCAGTCTGAACTAAATCAAGAGATTCAGCCTGAACTAAATCAAGATATTCAGCCTGAACTAAATCAAGAGTTTCAGGCTGaattaaatcaagaaattCAGACTGAACTAAATCAAGAAGCTCAAGCTGAGCAAAATCAAAACGACGAGGAGGAATTATTCAAGGAGGAAGCACCCAAAATTGATACTAATGAGCCAGTAGTGGAACAAGAATCATCCCAGAATGAAACTAGAAGAAGTAAACGTAGATTGGCTCGTCGGACATTCGCCGAACGGGATTCCGACGAAgagaattatttcgaaaatctgAATCTCAGTTCCCGATTAAGAAAGGCGCAGGCGGATAAGGCggagaaaatcttttttatgtgCTACTTGTGTGATAAGCAGTTCCTTTCGAAGAACGTGTTGAAAGAACATATGCATTCCCATGAGGAAGTGAGGAAAACACTATCTTTGAAGAAAACCCCGGAGAAACCGCAGAAGGTGCAGAGCAGCGTCTCCGTGGCGAAGACGCCGCCATCCGGAAAGAAAGCCAATAAGTGTCCTTATTGTGGTAAAGAGTATCTGTACATAATCTCATTTACTAAACACATTAAGCAACACGAGCGAGAGCGGGAGGAAGCGAAGGAGGATCCGATGCCGCTCGAGATATCGTTCCACGAGGATGAGCATAGTCTGGACTTCGAGAACGGCAACAGATCGGACAGCGAGAGCAAGAAGCGAAAGAGAGCAAGTACGGCCGATGATGCCGCGAGCGACAGCGACCAGGATAAGAGAAGAAAGCGTAATCACGTTGAGGAGTTTGCGTGCGACAAATGTTCAGAGAAATTCGACACGAAGCGAGGCCTGCAAAAGCATTCGGTCACGCATGTTAGCTTCAAGTGCAGTGTGTGCAACGAGGAATACGACACTCTGGAACAACTGAGAAATCACCGAACGAAGCACGTAGTTGAGGGCGTGCTCTCGGAGCAGGATTTGGAAGAGGATATGAAGATAACGGCCAAGATAGAGAACAGTGAGTACAATAAGAACGTCGAGGATGCGGAGAACAACGGCGAATCCGCCGAAACCACGAAGGAGCCGCTGAAGTGCCCGACGTGTTCCATGACGTTCTCGCGCATGAAATCGTTGTCCAGACACATGGACATAACGCACTCTGGCGTCCGCTCTTACGAATGCAAGATATGCCGTCAGCAATTCCTGCGGAAGGATCTGCTGCGCAGACATGCCGAGCAGCACGCGCGAGTGAAGATCTACAAATGTACCCAGTGTAATAAGACCTTCGGCAACGAGTTCACGCTGAGAAATCACCTGGTCGCCACGAATCACAAGACATTCATACAGGGACAGGAATACGATCCGAACAAGCGTATAAAGCGCACAGCGGCGAAAGCGGCGCAGAAGATCATTGACAAGATCAAGACGGAGGACGGCCTCGAGGATTATGAGGACGATAACGAGGACAATATCGATTACGACGTCAAGTTGGACGGGCATTATCGCCGTAAGCGCGACGCTACACCAAAGAAGTACAGTTATAAGAAGGAGTTTGAGTGCGCGTCTTGTAACAAAAGATACGGCACGAAGCAAGCGTTGACAAAGCACATGGAGCAGCATGTGAAGGAGGAGAAGGCAGAAAAGGCGGCGGAGAAGCTGAAGAAGGCCGCTCTGGAGAAGAAGGAAGCGCAGAAGACGACGAGCAACGTGGGCGATAACGATGACGACGATAACTTTGACTCCGACTTCGAGAGCGGCCTCGATTGGCCGATGGACAGCCACGAGTGCACCACGTGCAAGAAGCGATATAGCACGAAGAAGTCGTTGCTGCGCCACCAGCTGCTGCACGAGGAACCGAACTTCGAGTGTGACATCTGCAACGTCAAGTTTTACCGCAAAGACAAGCTGAAGGCGCACTACGACAAGTGCTCGGAGAAGAATCCCGATCAAGTGAGGAAGTGCAACATCTGCGGCGACAGTTTCGAGAACAATGAGATCCTGCGCGAGCACAGGGCCAAGCACGTCACCGAGGGTATCTTAACGGAGGAGGACCTGAGGGACATCGAGCCCAAGTCCGAAGAGAGAAAACCGGGCGAGAAGATCGGTCGGAAGAGGAGGACCGACATCGTGGGGCTCGAGTGTACCGAATGCAATAAACAGTATACTTCCAGGAAGGGTTTGCTGCGGCACATTCAGGTGCACGAGGGCAAGAAGTATCTGTGCGACATATGTCCGAAAAAGTTCTACCGGCGGGAGCACTTGAAGATCCACGTAGCCAAGCACAACATGATCAAGCCGTACAAGTGCACTCGCTGCAGCAAGCGCTTCATCAAGGAGGAGCAGCTCAACAACCACCTGCCTAAGCATGATCGCACATTCAAGAAGAACAAGGAGACCGACAGCTCGAAGAGATTCCTCTGTGAGATCTGCAGCAAGAGCTTCACGCAGTCGACGACGCTGATAGCGCATCTGCGCGCCCACAATGGTATCAAACCGTTCGTGTGCGAGGTATGCTCCAGGCCGTTTACCACCAACGCCTACCTGAAGATGCACatgcgcacgcacacgcaggAGCGTCCGTACATCTGCCAGTACTGTTCGCGAGCATTCGCGCGCGCCGACACTTTGGCGAATCACCTGACATCGCACACCGGCGAGGCCAAGTATCACTGCAAGTGCTGTCCGAAGAACTTCCGGCGGCTGAAGTCGCTGAAGGAGCACATGTTCATTCATACCGGTCAGCGGCCTTACGAGTGTCCAACCTGCGACAGGAAGTTCAACAATAACGGCAGCCGCTACGCGCACAGCAAGCGCTGCAAGCAGAATCTTTTGCAGAATCAGAACCGGGCACAGCAGATGATCCAGCAGacgcagcaacagcagcagcagcagcaacaacaacaacagccACAGCAAGTACAGATACAGGTGCAGCAAGCACAGCCACATCCGGTCAGGTTGCATCAAACCACGATCGGTCAGGCGCAAGTAGTCAAAGCGCAGAACATCAAAACGATCGCTATAACGAGACCGGCTGATCCTACCACGACGCAACAAGTTATGCAGCATCAGGAGATATTAATGCCTCTAATCCTACCGCTTACCGTCACTCTCACCGACGTAGGCGAGGAGGTGATCCTACCCGAGggtacaaaaatattcaccACCTCTTAA
Protein Sequence: MDAVEINTSGPSQGEDAVGSAVKICRVCLLGDLVMRDLFAESEVASLSAKAMSFASVKMLPGDGLPAQVCYMCADKLESAYEFKLQVEQADNVLREKLVGRIIKEELFLNEVEIHLDAERNDGIDEMNVSADYESGTTAVLPVESAADKNFLKNQLMILEAEKLAETEEMQQDPEQDNSEEITQESIVEEFQQELAGADDTDMSDDIDESRDEELSNENIIRNCTDAIPTEEHDYIMQQQCILPAEQLSLQEEMQEEMREEMQETVPKLEQDTKMQCQEILSEQTQEIQAEQCQEIQAEQIHETQAEQEIQAELNQEIQDELNQEIEAKLNQEIQAKLNREIQAKLNLEIQAKLNQEIQAELNQEIQPELNQEIQSELNQEIQPELNQDIQPELNQEFQAELNQEIQTELNQEAQAEQNQNDEEELFKEEAPKIDTNEPVVEQESSQNETRRSKRRLARRTFAERDSDEENYFENLNLSSRLRKAQADKAEKIFFMCYLCDKQFLSKNVLKEHMHSHEEVRKTLSLKKTPEKPQKVQSSVSVAKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREREEAKEDPMPLEISFHEDEHSLDFENGNRSDSESKKRKRASTADDAASDSDQDKRRKRNHVEEFACDKCSEKFDTKRGLQKHSVTHVSFKCSVCNEEYDTLEQLRNHRTKHVVEGVLSEQDLEEDMKITAKIENSEYNKNVEDAENNGESAETTKEPLKCPTCSMTFSRMKSLSRHMDITHSGVRSYECKICRQQFLRKDLLRRHAEQHARVKIYKCTQCNKTFGNEFTLRNHLVATNHKTFIQGQEYDPNKRIKRTAAKAAQKIIDKIKTEDGLEDYEDDNEDNIDYDVKLDGHYRRKRDATPKKYSYKKEFECASCNKRYGTKQALTKHMEQHVKEEKAEKAAEKLKKAALEKKEAQKTTSNVGDNDDDDNFDSDFESGLDWPMDSHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDIEPKSEERKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFIKEEQLNNHLPKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPFVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQNQNRAQQMIQQTQQQQQQQQQQQQPQQVQIQVQQAQPHPVRLHQTTIGQAQVVKAQNIKTIAITRPADPTTTQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01421709;
90% Identity: iTF_01423081; iTF_01421709; iTF_01422382;
80% Identity: -