Basic Information

Insect: Tetramorium immigrans
Gene Symbol: -
Assembly: GCA_011636585.1
Location: VBVO01001463.1:630-5953[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.02 2.6 9.3 3.1 1 23 480 502 480 502 0.97

2 19 0.017 2.1 9.5 0.5 2 23 539 560 538 560 0.96

3 19 0.00037 0.046 14.7 0.7 1 23 626 648 626 648 0.95

4 19 0.075 9.4 7.5 0.8 1 23 651 674 651 674 0.97

5 19 0.00015 0.019 16.0 0.8 2 23 721 743 720 743 0.94

6 19 0.0067 0.84 10.8 1.0 1 23 749 771 749 771 0.95

7 19 0.00023 0.029 15.4 1.1 1 20 777 796 777 801 0.94

8 19 4.3e-05 0.0054 17.7 1.3 1 23 875 897 875 897 0.97

9 19 0.00021 0.026 15.5 5.0 1 23 951 973 951 973 0.97

10 19 0.0003 0.037 15.0 0.7 1 20 978 997 978 999 0.94

11 19 0.05 6.2 8.1 0.3 2 23 1010 1031 1010 1031 0.97

12 19 3e-05 0.0038 18.2 0.6 2 23 1070 1091 1069 1091 0.97

13 19 2.8e-05 0.0035 18.3 1.6 1 23 1096 1118 1096 1118 0.95

14 19 0.0012 0.15 13.2 1.7 1 20 1124 1143 1124 1146 0.93

15 19 4.9e-06 0.00061 20.7 0.4 1 23 1162 1184 1162 1184 0.95

16 19 5.4e-07 6.8e-05 23.7 0.6 1 23 1190 1212 1190 1212 0.98

17 19 4.3e-05 0.0054 17.7 0.2 1 23 1218 1240 1218 1240 0.97

18 19 0.025 3.2 9.0 6.9 1 23 1246 1268 1246 1268 0.96

19 19 0.0054 0.68 11.1 0.6 1 20 1274 1293 1274 1295 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.02	2.6	9.3	3.1	1	23	480	502	480	502	0.97
2	19	0.017	2.1	9.5	0.5	2	23	539	560	538	560	0.96
3	19	0.00037	0.046	14.7	0.7	1	23	626	648	626	648	0.95
4	19	0.075	9.4	7.5	0.8	1	23	651	674	651	674	0.97
5	19	0.00015	0.019	16.0	0.8	2	23	721	743	720	743	0.94
6	19	0.0067	0.84	10.8	1.0	1	23	749	771	749	771	0.95
7	19	0.00023	0.029	15.4	1.1	1	20	777	796	777	801	0.94
8	19	4.3e-05	0.0054	17.7	1.3	1	23	875	897	875	897	0.97
9	19	0.00021	0.026	15.5	5.0	1	23	951	973	951	973	0.97
10	19	0.0003	0.037	15.0	0.7	1	20	978	997	978	999	0.94
11	19	0.05	6.2	8.1	0.3	2	23	1010	1031	1010	1031	0.97
12	19	3e-05	0.0038	18.2	0.6	2	23	1070	1091	1069	1091	0.97
13	19	2.8e-05	0.0035	18.3	1.6	1	23	1096	1118	1096	1118	0.95
14	19	0.0012	0.15	13.2	1.7	1	20	1124	1143	1124	1146	0.93
15	19	4.9e-06	0.00061	20.7	0.4	1	23	1162	1184	1162	1184	0.95
16	19	5.4e-07	6.8e-05	23.7	0.6	1	23	1190	1212	1190	1212	0.98
17	19	4.3e-05	0.0054	17.7	0.2	1	23	1218	1240	1218	1240	0.97
18	19	0.025	3.2	9.0	6.9	1	23	1246	1268	1246	1268	0.96
19	19	0.0054	0.68	11.1	0.6	1	20	1274	1293	1274	1295	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTGGAGATAAATACGTCGGGTCCGTCGCAGGGCGAGGACGCGATCGGCTCCGCCGTGAAGATATGTCGGGTCTGCCTGCTCGGCGACCTCGTGATGCGCGACCTCTTCGCGGAGAGCGAAGTCGCGTCCCTGTCGGCGAAGGCGATGAGCTTCGCCAGCGTTAAGATGTTACCAGGTGATGGTCTACCAGCACAGGTGTGCTACATGTGCGCTGACAAGTTGGAGTCGGCATATGAGTTTAAGTTACAAGTGGAGCAAGCTGATAATGTTCTTCGAGAAAAGCTTGTCGGCAGAATAATAAAGGAGGAGCTGTTTCTTAATGAAGTCGAAATACACTTAGATGCCGAGAGAAATGATGGTATTGATGAGATGAATGTCAGTGCTGATTATGAATCTGATACCACTGCAGTGCTACCAGTGGAATCGGCGGCTgacaagaattttttgaaaaatcagttAATGATTTTGGAAGCTGAAAAATTGGCAGAGACCGAGGAAATGCAGCAAGATCCGGAACAAGATAACTCGCAAGAAAGCATTGTGGAAGAATTTCAGCAAGAATTAGCCGGTGCGGACGATAATGATATGTCAGATGATATCGATGAATCTAGAAACGAAGAACTTTCCAATGGgaatattattcgaaattgCACAGATGCAATCCCAACAGAGGAACATGATTACATTATGCAGCAACAATGTATATTGCCTGCTGAACAACTTTCCTTGCCAGAAGAAATGCAGAAAACTGTACCAAAACTTGAACAAGACACTAAGATGGAGTGCCAAGACATATTATCTGAACAAACCCAAGAAATTCAAGCTGAACAATGTCAAGAGATTCAAGCGGAGCAAATTCACGAGACTCAGGCTGAGCAAGAGATTCAAGCTGAACTAAATCAAGAAATTCAGGATGAACTAAATCAAGAGATTGAAGCTAAACTAAATCAAGAAATTCAGgctaaattaaatcgagagattcatgataaattaaatcgagaaattCAGGCTAAATTAAGTCGAGAGATTCAGGCTGAACTAAATCAAGAGATTCAGCCTGAACTAAATCAAGAGATTCAATCTGAACTAAATCAAGAGATTCAGACTGAACTAAATCAAGAATTTCAGGCTGAACTAAATCAAGAATTTCAGGCTGAACTAAATCAAGAGATTCAGACTGAACTAAATCAAGAAGCTCAAGCTGAGCAAAATCAAAACGACGAGGAGATATTCAAGGAGGAAGCACTCAAAATTGATACTAATGAGCCAGTACAAGAATCATCCCAGAATGAAACTAGAAGAAGTAAACGTAAATTGGCTCGTCGGACATTCGCCGAACGTGATTCTGACGAAgagaattatttcgaaaatctGAATCTCAGTTCTCGATTAAGAAAGGTGCAGGCGGATAAGGCGGAGAAGATCTTTTTTATGTGCTACTTGTGTGATAAGCAGTTCCTTTCGAAGAGTGTGCTGAAAGAACATATGCATTCCCATGAGGAAGTGAGGAAAACGCTATCTTTGAAGAAAACGCCGGAGAAACCGCAGAAGGTGCAGAGCAGCGTCTCCGTGGCGAAGACGCCACCATCCGGAAAGAAAGCCAATAAGTGCCCTTATTGTGGTAAAGAGTATCTgtacataatttcatttactaAACATATTAAGCAACACGAGCGAGAGCGGGAGGAAGCGAAGGAGGATCCGATGCCACTCGAGATATCGTTCCACGAGGATGAACACAGTCTGGACTTCGAGAACGGCAGATCGGACAGCGAGAGCAAGAAGCGAAAGAGAGCAAGTACGGCCGACGATGCCGCGAGCGACAGCGATCAGGATAAGAGAAGAAAGCGTAATCACGTTGATGAGTTTGCGTGTGACAAATGTCCAGAGAAATTCGATACGAAGCGAGGCCTGCAAAAGCATTCGGTCACGCATGTTAGTTTCAAGTGCAGCGTGTGCAACGAGGAGGAGTACGACACTCTGGAACAACTGAGAAATCACCGAACGAAACACGTGATTGAGGGCGTGCTCTCGGAGCAGGATTTGGAAGAGGATATGAAGATAACGGCCAAGATAGAGAACAGTGAGTACAATAAGAACGTCGAGAATGCGGAGAACGGCGAATCCGCCGAAACCACGAAGGAACCGCTGAAGTGCCCGACATGTTCCATGACGTTCTCGCGCATGAAATCGCTGTCTAGACACATAGACATAACGCACTCCGGCGTCCGTCCTTATGAATGCAAGATATGCCGTCAGCAATTCTTGCGGAAGGAACTGCTGCGCAGACATGCCGAGCAGCACGCGCGAGTGAAGGTCTACAAATGTACCCAGTGTAATAAGACCTTCGGCAACGAGTTCACACTGAGAAATCACTTGGTCGCCACGAATCACAAGACATTCATACAGGGACAGGAATATGATCCGAACAAGCGTATAAAGCGCACGGCGGCGAAAGCGGCGCAGAAGATCATTGACAAGATCAAGACGGAGGACGGCCTCGAGGATTACGAGGATGATAACGAGGACAATATCGATTACGACGTCAAGTCGGACGGGCATTATCGCCGTAAGCGCGATGCTACACCAAAGAAGTACAGTTATAAGAAGGAGTTTGAGTGCGCGTCTTGTAACAAGAGATACAGCACGAAGCAAGCATTGACGAAGCACATGGAGCAGCATGTGAAGGAGGAGAAGGCGGAGAAGGCGGCGGAGAAGCTGAAGAAGGCCGCTCTGGAGAAGAAGGAAGCGCAAAAGACGACGAGCAACGTGGGCGataacgatgacgacgataaCTTTGATTCCGACTTCGAGAGCGGCCTCGACTGGCCGATGGACAGCCACGAATGCACCACGTGCAAGAAGCGATACAGCACGAAGAAGTCGTTGTTGCGCCATCAGCTGCTGCACGAGGAACCGAACTTCGAGTGTGACATCTGTAACGTCAAGTTTTACCGCAAGGACAAGCTGAAGGCGCACTACGACAAGTGCTCGGAGAAAAATCCCGATCAGGTGAGGAAGTGCAACATCTGCGGCGACAGTTTCGAGAACAATGAGATCCTGCGCGAGCACAGGGCCAAACACGTCACCGAGGGTATCTTAACGGAGGAGGATCTGAGGGACATTGAGCCCAAGTCCGAAGAGAGGAAACCGGGCGAGAAGATCGGACGGAAGAGGAGGACCGACATCGTGGGGCTCGAGTGTACCGAATGCAACAAACAGTATACTTCCAGGAAGGGTCTGCTGCGGCACATTCAGGTGCACGAGGGCAAGAAGTACCTGTGCGACATATGCCCGAAGAAATTCTACCGGCGGGAGCATCTGAAGATCCACGTAGCCAAGCACAACATGATCAAGCCGTACAAGTGCACTCGCTGCAGCAAGCGCTTCATCAAGGAGGAGCAGCTCAACAACCACCTGCCTAAGCACGATCGCACATTCAAGAAGAACAAAGAGACCGATAGCTCAAAGAGATTCCTCTGTGAGATCTGCAGCAAGAGCTTCACGCAGTCGACGACGCTGATAGCGCATCTGCGCGCCCACAACGGTATCAAACCGTTCGTGTGCGAGGTATGCTCCAGGCCGTTTACTACCAACGCCTACCTGAAGATGCACatgcgcacgcacacgcaggAACGTCCGTACATCTGCCAGTACTGTTCGCGAGCGTTCGCGCGCGCCGACACCTTGGCGAATCATCTGACGTCGCACACTGGCGAGGCCAAGTATCACTGCAAGTGCTGTCCGAAGAACTTCCGGCGGTTGAAGTCGCTGAAGGAGCACATGTTCATTCATACGGGTCAGCGGCCTTACGAGTGTCCAACCTGCGACAGGAAGTTCAACAATAACGGCAGCCGCTACGCGCACAGCAAGCGCTGCAAGCAGAATCTTTTGCAGAATCAGAACCGGGCACAGCAGATGATCCAGCAGAcacagcagcaacaacaacaacaacaacagcaacaacaacaacagccACAGCCGCAACAAGTACAGATACAGGTGCAGCAAGCACAGCCACATCCGGTCAGGTTGCATCAAACCGCGATTGGTCAGGCGCAAGTGGTCAAAGCGCAGAACATCAAAACGATCGCTATAGCGAGACCGGCTGATCCTACCACGACGCAACAAGTTATGCAGCATCAGGAGATATTAATGCCTCTAATCTTACCGCTTACCGTCACTCTCACCGACGTAGGCGAGGAAGTGATCCTACCTGAgggtacaaaaatattcaccACCTCTTAA
Protein Sequence: MDAVEINTSGPSQGEDAIGSAVKICRVCLLGDLVMRDLFAESEVASLSAKAMSFASVKMLPGDGLPAQVCYMCADKLESAYEFKLQVEQADNVLREKLVGRIIKEELFLNEVEIHLDAERNDGIDEMNVSADYESDTTAVLPVESAADKNFLKNQLMILEAEKLAETEEMQQDPEQDNSQESIVEEFQQELAGADDNDMSDDIDESRNEELSNGNIIRNCTDAIPTEEHDYIMQQQCILPAEQLSLPEEMQKTVPKLEQDTKMECQDILSEQTQEIQAEQCQEIQAEQIHETQAEQEIQAELNQEIQDELNQEIEAKLNQEIQAKLNREIHDKLNREIQAKLSREIQAELNQEIQPELNQEIQSELNQEIQTELNQEFQAELNQEFQAELNQEIQTELNQEAQAEQNQNDEEIFKEEALKIDTNEPVQESSQNETRRSKRKLARRTFAERDSDEENYFENLNLSSRLRKVQADKAEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKTLSLKKTPEKPQKVQSSVSVAKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREREEAKEDPMPLEISFHEDEHSLDFENGRSDSESKKRKRASTADDAASDSDQDKRRKRNHVDEFACDKCPEKFDTKRGLQKHSVTHVSFKCSVCNEEEYDTLEQLRNHRTKHVIEGVLSEQDLEEDMKITAKIENSEYNKNVENAENGESAETTKEPLKCPTCSMTFSRMKSLSRHIDITHSGVRPYECKICRQQFLRKELLRRHAEQHARVKVYKCTQCNKTFGNEFTLRNHLVATNHKTFIQGQEYDPNKRIKRTAAKAAQKIIDKIKTEDGLEDYEDDNEDNIDYDVKSDGHYRRKRDATPKKYSYKKEFECASCNKRYSTKQALTKHMEQHVKEEKAEKAAEKLKKAALEKKEAQKTTSNVGDNDDDDNFDSDFESGLDWPMDSHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDIEPKSEERKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFIKEEQLNNHLPKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPFVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQNQNRAQQMIQQTQQQQQQQQQQQQQQPQPQQVQIQVQQAQPHPVRLHQTAIGQAQVVKAQNIKTIAIARPADPTTTQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01421709;
90% Identity: iTF_01423825;
80% Identity: -