Timm001013.1
Basic Information
- Insect
- Tetramorium immigrans
- Gene Symbol
- Mblk-1
- Assembly
- GCA_011636585.1
- Location
- VBVO01004038.1:234-2581[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-18 9.7e-15 54.6 0.0 1 43 240 283 240 285 0.95
Sequence Information
- Coding Sequence
- ATGGATACGCGAGACTATCGCATACCCGAAGTGATGAGGAAGCTGATGTGCGAGGACAAGAGGCTGAACAAGAACGTGAACGGAGATCAGTCGCAGCCGCATCACCATCAGCACCATCCCCTCGCGGCGCATCAGCAAACGCAGTCGCAGCAGCAGCGCGCGCCCATGACGAATGACGACTTCAATCCTAACATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCAACTTCCGCCGCGTTCGCCCAGAGCTTCGCGGCTGCCGCCTCGAGTCCGGGCCTCCTGGAGCGAGCTAGTCCAGCGTTCTCCGGCACTAGTAGCCCCACGAATTCGCTGATGGGCAAAGCGGTGTCCGTTAATTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGCCAGACGCCCAGCGCGGCCGGCATACCGGGCTGCCAATCGGCCGGCGTGGTTCCATCGCAGCAGGCCATGATGACTGACCCGAGTCCGTTCAAGAGAGGTCGTTACACACCTCCGCAACCACCGCAACAGCAATCATCGGCGCAGCAGCAGTCCAAGCAGCAGTCGCAAGATGCGAATAAGTCGAAGCCGGGCACCGGCGGCAAGGGCACCAGACCTAAGCGCGGCAAATATAGGAATTACGACAGGGACAGCCTCGTCGAGGCGGTACGCGCAGTCCAGCGCGGCGAAATGAGCGTGCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACCGCGAcgacggcagcggcggcggcagcggcggcggcggcggcggctgcggCAATGCGGCCGGGCACTGCTGGCGTTGACAAGAAGCCGCAGCTGAAGCCACAGAAGCCGTTCACACCGCCCGGCGGTATACCCGGTCCGAACGGATTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCGTTTGGGCCCTTCAACTTCTGGAACCCGACGCCCTTCATGCCCTCCCCCTTCATGGGTGGCGCGCCGAACGTGCCGATCCTTCCGGAACAATATTTCGCGTCGCAGAGAATGCGCGGCTTGCAGGAGCAACAACGAAACGCCACGATGGTGCAGCAACAGCACCAGCAACGAGACCGAGACCGAGATCGAGACCGAGACGGGGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCAATGGCGAAGGCGCCGCGCGACATGGAGAGTATCTACGACGGGCCCGGGGCAAATGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTTGAGACAGGCATACCAAGGGACCAGCGGACGATAGCGGAAGCGAGGaatcagcagcagcagtcgTCGTCGCAACATCCAGAAACGATGAGCAGCAAGACCCTGATCGACCAGCTGTGCAGAAACTCGAGGAGGACCCCACTGCCGCGAATGGCGCAGGACAGCAGCGAGGACGAGAGTTATCGAGGACCAACGGGCAGAATGGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTCGATTTAAGCCCTTCACCGTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCGCCGACACCTCTGTCGATTTCCCGAGCGGGTAGCAGGGACGAGGACAGCACCCGTGACTCGAGGATTGATCGCAGCAGCAGAGAGCGCGATGTTCACAATGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGCttgcaacagcagcagcagcagcagccacAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATTCGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGATCCGGCGAGCCGACTAACAGCCAGCagccggcggcggcggagcAGCGCGGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MDTRDYRIPEVMRKLMCEDKRLNKNVNGDQSQPHHHQHHPLAAHQQTQSQQQRAPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFAAAASSPGLLERASPAFSGTSSPTNSLMGKAVSVNFRDVIAKSISVKFQEGQTPSAAGIPGCQSAGVVPSQQAMMTDPSPFKRGRYTPPQPPQQQSSAQQQSKQQSQDANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDRDRDRDGVGVSGTADAAGTSNSRSASMAKAPRDMESIYDGPGANGSFLDNLIRSSLETGIPRDQRTIAEARNQQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRMVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSRERDVHNGGQEDRDRKQPLSLQQQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEFAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAEQRGTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00128880;
- 90% Identity
- iTF_00128880; iTF_01407156; iTF_01421463;
- 80% Identity
- -