Apic007756.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003063865.1
- Location
- NJRM01000089.1:441278-443640[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-18 8.7e-15 54.6 0.0 1 43 240 283 240 285 0.95
Sequence Information
- Coding Sequence
- ATGGATACGCGAGACTATCGCATACCCGAAGTGATGAGGAAGCTGATGAGCGAAGACAAGAGGCTGAACAAGAACGTGAACGGAGACCAGTCGCAGCCGCATCATCATCAGCACCATCCCCTCGCCGCGCATCAGCAGTCGCAGCAGCAACAGCGCGTGCCCATGACGAACGACGACTTCAATCCCAACATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAAATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAAAGCTTCGCGACTGCCGCCTCGAGTCCGGGCCTCCTGGAGCGAGCTAGTCCAGCGTTCTCCGGCACCAGCAGCCCCACGAATTCGCTGGTAGGCAAAGCGGTGGCTGCCGTCAATTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGCCAGACGCCCGGTGCGGCCGGCATACCGGGCTGCCAACCGGCCGGCGTTCCATCGCAACAGGCTATGATGACAGACCCGAGTCCGTTCAAGAGGGGTCGTTACACACCCCCGCAACCGCAGCAACAGCAATCGTCGACGCAGCAACAGCAATCTAAACAGCAGTCGCAGGAGGCGAACAAATCGAAACCGGGTACCGGCGGCAAGGGCACCAGACCTAAGCGCGGCAAGTACAGGAACTACGACAGAGACAGCCTCGTCGAGGCGGTACGTGCAGTTCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAATCGAAGGAGACCGCGacgacggcagcggcggcggcggcagctgcGGCGATGCGGCCGGGTACTGCTGGCGTCGATAAGAAGCCGCAGCTGAAGCCGCAGAAACCGTTCACACCGCCCGGCGGTATACCCGGTCCAAACGGACTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGGGCCTTTCAACTTTTGGAACCCGACGCCCTTCATGCCCTCCCCTTTCATGGGTGGCGCGCCGAACGTGCCGATTCTTCCGGAACAATACTTTGCGTCGCAGAGAATGCGCGGACTGCAGGAGCAACAACGAAACGCCACGATGGTacagcagcagcatcagcaACGAGATCGAGACGGGGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGGCGAAGGCGCCGCGCGACATGGTGGAGAGCATCTACGACGGGCCCGGGGCGAACGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTCGAGACAGGCATTCCAAGGGACCAGCGGGCGTTAGGGGAGGCGAGAAGCCAGCAGCAGTCGTCGTCGCAACATCCGGAGACGATGAGCAGCAAGACTCTGATCGACCAGCTTTGCAGAAACTCGAGAAGAACCCCGCTGCCGCGGATGGCGCAAGATAGCAGCGAGGATGAGAGTTATCGAGGACCAACGGGCAGGATAGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTCGATCTCAGCCCCTCACCATCAGAGAGGGGTCGCACGGAGGACGGCAGCGATCGGCTGACGTCACCGCCGACGCCTCTGTCGATCTCCCGAGCGGGTAGCAGGGACGAAGACAGCACCCGTGACTCGAGGATCGATCGCAGTAGCAGAGAGCGCGAGGTTCACAACGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGCctgcaacagcagcagcagcaaccaCAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGATCCGGCGAGCCGACTAACAGCCAGCAGCCGGCGGCGGCGGAGCAGCGCGGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MDTRDYRIPEVMRKLMSEDKRLNKNVNGDQSQPHHHQHHPLAAHQQSQQQQRVPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFATAASSPGLLERASPAFSGTSSPTNSLVGKAVAAVNFRDVIAKSISVKFQEGQTPGAAGIPGCQPAGVPSQQAMMTDPSPFKRGRYTPPQPQQQQSSTQQQQSKQQSQEANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDGVGVSGTADAAGTSNSRSASMAKAPRDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRALGEARSQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAEQRGTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01422145; iTF_01421463; iTF_01271112; iTF_00279882;
- 90% Identity
- iTF_01422145;
- 80% Identity
- -