Tbic016046.1
Basic Information
- Insect
- Tetramorium bicarinatum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_011636605.1
- Location
- VBVP01004445.1:196-13540[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-18 9.9e-15 54.5 0.0 1 43 255 298 255 300 0.95
Sequence Information
- Coding Sequence
- ATGTTGATGAATCTCtactacaaatattataataatgacgTAGGCATGGATACGCGAGACTATCGCATACCCGAAGTGATGAGGAAGCTGATGTGCGAGGACAAGAGGCTGAACAAGAACGTGAACGGAGACCAGTCGCAGCCGTCTCACCATCAGCACCATCCCCTCGCGGCGCATCAGCAAACGCAGTCGCAGCAGCAGCGCGCGCCCATGACGAATGACGACTTCAATCCTAACATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCAACTTCCGCCGCGTTCGCCCAGAGCTTCGCGGCTAATGCCTCGAGTCCGGGCCTCCTGGAGCGAGCTAGTCCAGCGTTTTCCGGCACTAGTAGCCCCACGAATTCGCTGGTGGGCAAAGCGGTGTCCGTTAATTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGCCAGACGCCCAGCGCGGCCGGCATGCCGAGCTGCCAATCGGCCGGCGTGGTTCCATCGCAGCAGGCCATGATGACAGACCCGAGTCCGTTCAAGAGAGGTCGTTACACACCTCCGCAACCACCGCAACAGCAATCATCGGCGCAGCAGCAGTCCAAGCAGCAGTCGCAAGATGCGAATAAGTCGAAGCCGGGCACCGGCGGCAAGGGCACCAGACCTAAGCGCGgcaaatatagaaattacgACAGGGACAGCCTCGTCGAGGCGGTACGCGCAGTCCAGCGCGGCGAAATGAGCGTGCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACCGCGAcgacggcagcggcggcggcggcggcggcagcggcggcggctgcGGCAATGCGGCCGGGCACTGCTGGCGTTGACAAGAAGCCGCAGCTGAAGCCACAGAAGCCGTTCACACCGCCTGGCGGTATACCCGGCCCGAATGGATTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGGGCCCTTTAACTTCTGGAACCCGACGCCCTTCATGCCCTCCCCCTTCATGGGTGGCGCGCCGAACGTGCCGATCCTTCCGGAACAATATTTCGCGTCGCAGAGAATGCGCGGCTTGCAGGAGCAACAACGAAACGCCACGATGGTGCAGCAACAGCACCAGCAACGAGACCGAGATCGAGACCGAGATCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACGGGGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGGCGAAGGCGCCGCGCGACATGGTGGAGAGTATCTACGACGGGCCCGGGGCAAACGGCAGTTTTCTGGACAATCTGATCAGGTCGAGCCTTGAGACAGGCATACCAAGGGACCAGCGGACGATAGCGGAAGCGAGGAatcagcagcagcagtcgTCGTCGCAACATCCGGAAACGATGAGCAGCAAGACCCTGATCGACCAGCTGTGTAGAAACTCGAGGAGGACCCCGCTGCCGCGAATAGCGCAGGACAGCAGCGAGGACGAGAGTTATCGAGGACCAACGGGCAGGATGGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTCGATCTAAGCCCGTCACCGTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCGCCGACGCCTCTGTCGATCTCCCGAGCGGGTAGCAGGGACGAGGACAGCACCCGTGACTCGAGGATCGATCGCAGCAGCAGAGAGCGCGATGTTCACAACGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGcttgcagcagcagcagccacAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATTCGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGGTCCGGCGAGCCGACTAACAGCCAGCagccggcggcggcggagcAGCGCGGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MLMNLYYKYYNNDVGMDTRDYRIPEVMRKLMCEDKRLNKNVNGDQSQPSHHQHHPLAAHQQTQSQQQRAPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFAANASSPGLLERASPAFSGTSSPTNSLVGKAVSVNFRDVIAKSISVKFQEGQTPSAAGMPSCQSAGVVPSQQAMMTDPSPFKRGRYTPPQPPQQQSSAQQQSKQQSQDANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDRDRDRDRDRDRDRDRDGVGVSGTADAAGTSNSRSASMAKAPRDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRTIAEARNQQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRIAQDSSEDESYRGPTGRMVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSRERDVHNGGQEDRDRKQPLSLQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEFAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAEQRGTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00128880;
- 90% Identity
- iTF_01422145;
- 80% Identity
- -