Basic Information

Insect: Tetramorium bicarinatum
Gene Symbol: znf423_1
Assembly: GCA_011636605.1
Location: VBVP01002471.1:5552-12307[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.3 1.8e+02 3.4 1.8 11 23 8 20 7 20 0.93

2 19 0.00011 0.015 16.3 0.2 1 23 26 48 26 48 0.99

3 19 0.0016 0.22 12.6 0.4 1 23 215 238 215 238 0.94

4 19 0.34 46 5.3 0.0 3 23 251 272 249 272 0.88

5 19 0.65 89 4.4 0.1 3 23 341 361 340 361 0.97

6 19 0.0085 1.2 10.3 0.5 3 23 378 398 376 398 0.95

7 19 0.0004 0.054 14.5 0.7 1 23 407 430 407 430 0.93

8 19 1.8 2.5e+02 3.0 0.2 1 23 435 458 435 458 0.92

9 19 0.061 8.3 7.6 2.7 2 23 540 561 539 561 0.96

10 19 0.013 1.8 9.7 0.3 1 23 566 589 566 590 0.93

11 19 2.6 3.6e+02 2.5 0.1 2 23 654 677 653 677 0.81

12 19 2.7e-05 0.0036 18.2 1.0 2 23 693 715 692 715 0.96

13 19 0.023 3.1 9.0 0.9 1 23 724 747 724 747 0.93

14 19 0.73 1e+02 4.2 1.0 2 23 755 776 754 776 0.96

15 19 0.0053 0.72 11.0 0.0 2 23 942 964 941 964 0.92

16 19 0.11 15 6.9 0.2 1 23 975 998 975 998 0.95

17 19 1.1 1.5e+02 3.7 0.1 2 23 1011 1032 1010 1032 0.94

18 19 0.018 2.4 9.3 0.1 2 23 1041 1063 1040 1063 0.94

19 19 0.059 8 7.7 2.6 1 23 1070 1093 1070 1093 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.3	1.8e+02	3.4	1.8	11	23	8	20	7	20	0.93
2	19	0.00011	0.015	16.3	0.2	1	23	26	48	26	48	0.99
3	19	0.0016	0.22	12.6	0.4	1	23	215	238	215	238	0.94
4	19	0.34	46	5.3	0.0	3	23	251	272	249	272	0.88
5	19	0.65	89	4.4	0.1	3	23	341	361	340	361	0.97
6	19	0.0085	1.2	10.3	0.5	3	23	378	398	376	398	0.95
7	19	0.0004	0.054	14.5	0.7	1	23	407	430	407	430	0.93
8	19	1.8	2.5e+02	3.0	0.2	1	23	435	458	435	458	0.92
9	19	0.061	8.3	7.6	2.7	2	23	540	561	539	561	0.96
10	19	0.013	1.8	9.7	0.3	1	23	566	589	566	590	0.93
11	19	2.6	3.6e+02	2.5	0.1	2	23	654	677	653	677	0.81
12	19	2.7e-05	0.0036	18.2	1.0	2	23	693	715	692	715	0.96
13	19	0.023	3.1	9.0	0.9	1	23	724	747	724	747	0.93
14	19	0.73	1e+02	4.2	1.0	2	23	755	776	754	776	0.96
15	19	0.0053	0.72	11.0	0.0	2	23	942	964	941	964	0.92
16	19	0.11	15	6.9	0.2	1	23	975	998	975	998	0.95
17	19	1.1	1.5e+02	3.7	0.1	2	23	1011	1032	1010	1032	0.94
18	19	0.018	2.4	9.3	0.1	2	23	1041	1063	1040	1063	0.94
19	19	0.059	8	7.7	2.6	1	23	1070	1093	1070	1093	0.97

Sequence Information

Coding Sequence: ATGGTGATCGCAAATGTCATGAAAAACTCCGATCACCTGAAGATTCACTTGAAGACGCACGACACCCAGAGGCCTTACCAATGCACGGCTTGCACGAGAGGCTACAGCTCAGCCGCGGCCTTAACGTCGCACATGCAATCCCACAAGAAACATCACCAATCATCGTCCTCTCAATCGACCGGCAAGCTCCAGGACCTCGATTACGGTAGAAGAAGCGTTTCCTCGCACAGCACATCGTCACCGCCAgtgccgtcgtcgccgtcgccgtcgttgaATCTCACTCTGAACCCGAGGAACGTTCTGAAAACGTCACAGGGCACCGGCAGCACTTCCACCACGCCGATTCTCAACTCGCCCTTGAAGCTCGCCTGCATGTACTGCACCCGCGACTCTTTCAGCTGCATGCAGCAGCTGCAAATGCACGTGCGCACGATGCACCAGGCGATCCTCAGCGGCGCGGAGGGTCTGGCGCGCCCACCGTCGCCGAGCAGAACGTCGAACGAGCAACAGGCGGTGTTTTGCTCCCGCGACAAGCCTCCCGATCGCCAGGACAGCTCGAAGGACTCGCGCCTCGACCGGAAGTACCCGCCTGAGGAGAGGGCCGACCGACCTGCCGGCGAACGAGACCACTACGAGAACGCGTTCACCTGCGACCAATGTACCATGAAATTCTCCACCCTAGCCGGTCTGCGCGATCACTCGCTATCGATACACCGAGTGGACAGCAACTTCAGCGCGACGATGGTGATATGCCCGTTGTGCGGCATTCCGTGCACCTCGACAGCGGCCTACGCCGAGCACTACGTTCTCCAGCACTGCGAGAACCGCCGACTGGCGCCGACGACCGGGATAGATTACAGCGAGACGAAGCTGAACGGCGTTTACAACAGCGCTCCAACGAGAGACTCCAGAGTGGCGAGAAGCAGGGACGCGGCTCTGGAAGCCGCCGATCTCACGAACAAACGTCCGGCCAGGGCATCCGCGGACGCCACCGCTGGCTACACCGCCGACACCCTGTTGTGCGGTCAGTGTGACGCCGCGCTCAAGGATTTCGAGTCCTTTCGCGAGCACGTGGCCCGGCACCTGCAGGCCGACCATCGCAACCAGGAGATATCCAGCAGGCAACATCTGTGTCCCAAGTGCGAGTCCGTCTTCCCGACCCGCGAGGACATGCTGGCCCATCTGACCAAACACTACCTCGGCCAAGTCAGCAAGGAATTCACGTGCGGCGCGTGCAAGAAGTTCTACCCGCATCCGGATCAACTTCAGAGACACTTGCTGGACGCCCACGCGCATCATCTGTACCGTTGCGCTCTGTGCCGGGACACGTTCGACTCCAAGGTGGCGATACAAGTGCACTTCGCGGTCAAGCACAGCCAGGAGTGTCGGATCTACCGATGTAGCGTATGCACCCTGTCCAACAACGAGAACTCGCCGCCGGGGGCGAACGCGGCAAACTCCGGCGACGGCAGATGCTTCTTCAGGAGCGAGGCCGAGATGGCGGCCCACGTGCGCAGTATACACGCGCCTCCTCTCCCCGTCGTCCCGTCCCTGATAAATAGCAGTCCTGTCGGAGCTACGAGAAGTCCGGCCTCGACACCCGGCGTCGTCGCGACGCGCTGCGTCTTCTGCGGAACATGTTGCAGCTCGGAGCTCGAGCTTCAGCTTCATCTCGCCAGTCATTCGGCCAGTCTCTACAGGTGTCCCATCTGCAGGGAGGGTTTCGCGGTGGAATTCCTGTTGGATCGACACGTCACTCAGGTTCACCATCAAGCGGCGCAGAACCACCAGGCATCGTCAGTCAGAAGCAGGGAGAACGGACGTGTTCATCGACCGGCCAGAAATCAGGAAGAGACGAAATCTGTGAAGAGGGGCCGGTCGCCAGCGTCAAGCAACAACAACTCCTTGAATCAGCGCGACAACAACAACAAACGTCCGAATTACGGCACTTCCGGTCAGCAATGCGAGCTCTGCGAACGCGGGGAATTCGCAAACGAGGCCGAGCTACAGGCACACAAGAAACTCGCCCACACCCCGCCGAAGCTCTCCAACAAGTCCCTATCTACCTTGAGCATGACATGTGGCTACTGCGGCGAGGTCTGTCGCTCGCGAAGCGAGCTGGAATCTCACACGAGGATTCAGCACGCGTCCAACGAGCCTGGCGGCCGTCACAAGTGCAATATCTGCGACGAGGTGTGCCCGTCCGGGGCGAGTCTGGCCGAGCACAAGCTGCAAAAGCACTGCAAGATCCAGCTGAGCGACACGTGCGTCGTGTGTCGCGGCTGCCTTACGTCGGAAAGCCAATTCCTGGACCACGTGCAGAGACATAGCCTGGAGAACGTGGATCCGCAACAACGGCTGGACAGTACGCTGCCTCATCTGCCCGCGCCGTGCGTTGTCTGCCGACAGACGTTGATCAGCGATCTGGAATGTCGTCTGCACGCTCGGCATCACCTGCGAACATCCTCGGGACCGCGCAGCACCGGCTCCAGCCCGATCAGTCCTGGTGGCGGCAAGAGCCAGAGTCAAGGTTGCTGCCTCTGCTTGCGCGACTTCGCACCCGAGGACTTTGTCAACCTGCCACCTAATCCTGCCAGTACAAGCGGACAATTGCTCAGAGTCTGTAAACCGTGCTACATGCGACACTCTCAGGGACTACCTATTCTGAACTCGACCACCTATGAGCATCGGGCCAAATACGAGGCGGCCTGGCTCGCGAGCAAGGATCACGGCCAGTGGGAGGAATCCAAGGACAAGTGGGAACACGAACGAGGACTCAAGGTAGAGGAACGATCCAGAAACGACGGAAACGCGAATAAGAAACGGTGCGAAGAGTGCGGGATAAAGTTCGAAGATCCCGAAGAAGCTGAGAAGCACAGAATCGCCGAGCATGAAAAGCCTGCCAGCGGTGGCTCCAATACCTACACTTGCATACAATGTCAAGTGTCGTTTCCAACTGAAGCTAAAATTCAGCAACACGTGAGAAAAGAACACTTGGAGGGATCCGGAAAAGTCTCTTTGGAGGCTTTGCGATGTCATTTGTGTTTATTCGAAGCCGCCAGTCCTATGCAACTGCAAATTCACTTAATAGAACACACTTTCGCCGGTTGTGCTGCCCTTAGCTGTTACATCTGTCAGTCGCTCTTCACAACTCCCATTGGCCTTCAGAATCATATGCTGCAGGAACACGGACTAGATGCGCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTCTTCAGCGCGGAATTGGACCATCACGTACTGACTTTCCACCGACCAGGGGAAGAGATCCATCCTTCGTCGACCGAGAATGCTCGCGAGAAGAATCGCGAGCCTGAAAAGCGCGAAGGTAATGTAACAGTGAAGGAAGAAGTGATGCAAGGCGgcaaggaagaagaagaggaagaagaagaggtgAATGTAGATGATCAAATAGGACAGGGACAACAAGAAGAGGTTGAACTAGAGGAGCAGAAGCTAAAGACGGAAGTAAACGGCGAGACATCCGGCAGGATTGAATCGTGA
Protein Sequence: MVIANVMKNSDHLKIHLKTHDTQRPYQCTACTRGYSSAAALTSHMQSHKKHHQSSSSQSTGKLQDLDYGRRSVSSHSTSSPPVPSSPSPSLNLTLNPRNVLKTSQGTGSTSTTPILNSPLKLACMYCTRDSFSCMQQLQMHVRTMHQAILSGAEGLARPPSPSRTSNEQQAVFCSRDKPPDRQDSSKDSRLDRKYPPEERADRPAGERDHYENAFTCDQCTMKFSTLAGLRDHSLSIHRVDSNFSATMVICPLCGIPCTSTAAYAEHYVLQHCENRRLAPTTGIDYSETKLNGVYNSAPTRDSRVARSRDAALEAADLTNKRPARASADATAGYTADTLLCGQCDAALKDFESFREHVARHLQADHRNQEISSRQHLCPKCESVFPTREDMLAHLTKHYLGQVSKEFTCGACKKFYPHPDQLQRHLLDAHAHHLYRCALCRDTFDSKVAIQVHFAVKHSQECRIYRCSVCTLSNNENSPPGANAANSGDGRCFFRSEAEMAAHVRSIHAPPLPVVPSLINSSPVGATRSPASTPGVVATRCVFCGTCCSSELELQLHLASHSASLYRCPICREGFAVEFLLDRHVTQVHHQAAQNHQASSVRSRENGRVHRPARNQEETKSVKRGRSPASSNNNSLNQRDNNNKRPNYGTSGQQCELCERGEFANEAELQAHKKLAHTPPKLSNKSLSTLSMTCGYCGEVCRSRSELESHTRIQHASNEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDSTLPHLPAPCVVCRQTLISDLECRLHARHHLRTSSGPRSTGSSPISPGGGKSQSQGCCLCLRDFAPEDFVNLPPNPASTSGQLLRVCKPCYMRHSQGLPILNSTTYEHRAKYEAAWLASKDHGQWEESKDKWEHERGLKVEERSRNDGNANKKRCEECGIKFEDPEEAEKHRIAEHEKPASGGSNTYTCIQCQVSFPTEAKIQQHVRKEHLEGSGKVSLEALRCHLCLFEAASPMQLQIHLIEHTFAGCAALSCYICQSLFTTPIGLQNHMLQEHGLDARPYDCSKCTLKFFFSAELDHHVLTFHRPGEEIHPSSTENAREKNREPEKREGNVTVKEEVMQGGKEEEEEEEEVNVDDQIGQGQQEEVELEEQKLKTEVNGETSGRIES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00126199;
80% Identity: -