Tmel015761.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetragonula mellipes
Gene Symbol
Hr39
Assembly
GCA_011634685.1
Location
WINE01009326.1:3099-7172[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.99 2.5e+04 -4.3 7.8 109 163 26 85 20 106 0.54
2 5 0.58 1.5e+04 -3.5 4.3 95 163 333 399 282 430 0.53
3 5 2 5.1e+04 -10.1 16.6 76 160 426 523 366 540 0.61
4 5 1.1e-08 0.00029 21.9 0.1 1 38 606 640 606 673 0.76
5 5 7.3e-72 1.8e-67 230.0 0.1 89 408 665 984 634 984 0.80

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGTCCAGGCCCTGGGCCTGGTGGTCCTGGCTGGTGGCCAGCCTCGCAATCCTGGAAGACGAATTCTTGCACCGCCGCCTCCTCCTCGTCCACTAGTAGTTCGACCATTCCAGACAGCTCCGCCTCCGTCTCTGCTTCCTGCACCACCACTACCTCCTCCCTGGCGACCACCACGTCAACCACTTCCTCGACCAGCTGCTGTTCCTCCACACCGTCTGGAACGATCACTGCTGCCCGCTCTTCCGAAACAGGAAAGAATGTCTCTGTCACGACGATTAACGTACCCCCTAATCAGGATATGCACGAtgGCAAAGGTATATGCAAGTATCTTACTGGACAAAACGGCGTGACAGTATCCGTGGTGTCAAGCTGTGGATCCGTACTAGGGTGTGGAAACGCGAATGTCGCGTCAACCACGGGAATTGGCCCGAATACTGGCTCCGGCGGCAGCACCAGTACGCAGAGTATTGGAATCGGAGTCAACGTCCTCAGCCAGAATACGGCCGATGACGACGCGGAGGACAGCGACGTCGAGATAAGCAAAATCGACTTTCGAGGGGTGAATTTACgtacgaagaagaaacgagatgtATTATCGGGTAGCCAGAGCGGAGAGAAAATCGGTGACGGAGAGGTCGAAGATGGGAACGGCTGTTACGATGGGAACGACGCGTCTCAACAACAACCCGAGAGGCCCATGTCGTGGGAAGGGGAACTTTCCGACCAAGAAATGTCTTCCAATACAATCACAAATCAAGATACTCACGAGGATACATCAATGGAGGGCGTTCAAGTGTGTGGCCCGAGTCCGGGGCCAATGGAGCaaaaatttccgataaaaccaGAACCAGACTTTCAGTCCAATCCAAGATTCACGTTTGGTTCTTTTCACGAGACAGGATTACCTCTGGTTCACGGCCAACAAATACAGCAGCAACGCAACATCGAGAATCTTGAGCAGACGCAGCAAAACGATTTGCCTCTTCTCGTAGGAAAGTTACTCGGTGGTTATAATAGTTCAACTCCAAATCACAGTCCGGTGTTGAATCCTAGACACCATTTAACAAAGCATAGCCATACAAGATCGCAGgTGCCGTCACCGGACTCGGCGATTCATTCCGCATACAGCGTATTCAGTTCTCCAACGCAAAGTCCTCACGCAGCTCGGCATTCCGCTCTAGGCACGGGAAGTCCAGTCCCGTCTTCGTCGCTGTCCTTGTCGCGACACAGTTTTAATAATTCGACCTCTTCGTTGTCGCTCTCCTTGTCACATTCGCTCTCGAGAAACAATTCGGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCACTCGCCCGTTCAACAACCGAGACATCCACACCACCAGCATCAAGTTGCTCAAGGAAGTCCACTCCATCTACCAGCAACCGCCTCTCCCGTCATTCCTCATCACTATTCCTCCTCTGCACCGGGCTCGGAGCTATCTCCAGAAGGACACACTGCTACAGACGATCAGGAAGACTGCAGAATACCTTCAGCACCGTCTGGAATATCCACGAGACAGCAATTGATCAACAGCCCGTGCCCAATTTGTGGGGACAAAATCAGCGGTTTTCATTACGGGATATTCTCGTGCGAGTCGTGCAAGGGATTTTTTAAACGCACCGTCCAGAATCGGAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTCGCTACCAGGAAAAAATGCCCCGCCTGTAGATTTGACAAGTGCCTCAATATGGGTATGAAGCTTGAGGCGATTAGAGAAGATCGCACCAGGGGTGGTAGAAGTACGTACCAATGTACGTATACTCTTCCAGCAAGTCTTGTCGGTAGTCCCGCGAGTAACATCGCCAACGATAAATTAACTACTGGAGGAAATTGTAGCCCAGCTCCAGCCGGTAACGAACATCACTATCCGGCAAGACACCACTCGAATCACTCGCATAAAATGCAAGTGGTACCCCAACTTCTACAGGATATCATGGATGTAGAACATTTATGGCATTACAATGACAATGATCGCATGACTGGGATTCAAAATGCAGGGATGAATCCGACTAGAAATAACGATACAATCCCGTTATTGGGTGTCAGAGGCAGCGGAGGATCTGGAATAGAGAATGACACAGATTCGAGTGTTGAGTGTTCCTCTAATGGAACCACAGGAAATGGCAATCCCAGTAACAGAAGAGACGACAGATCATGCTCTAGTGTTTCAAATGTTGGTAACGAACAATGTGCTGCATCCATTAGTAGCAGTTCTCAAATTAACAATACCAATGGTAATCCAACTCAACATCCTGATTTCTTGTCAAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAAAGTTTACCATTGTTTAAGAACATTTCAATCGATGATCAAATctgtttgttaattaattcctGGTGCGAGCTACTGCTCTTCTCATGCTGTTTCCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACACTGGAACAGGCTAGGCAGCTTGGTTTGGCGACTTGCATTGAGAGGATGCTTGCATTCACTAACAATTTGAGAAGGCTCCGAGTAGATCAATACGAATATGTAGCAATGAAGGTAATAGTACTGTTAACCTCTGATACAAGTGAACTAAAAGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAGGCTTTACAAGCGCTACAGCAATATACTATAGCAAGGTATCCGGAAATGCCTGCCAAGTTTGGTGAATTATTATTGAGAATTCCAGATTTACAAAGAACATGCCAGGCAGGAAAGGAATTGTTAAGTGCGAAACGTGCCGAAGGAGAAGGCAGCTCATTTAATTTGTTGATGGAATTGTTGAGAGGagatcattga
Protein Sequence
MSEQNGPSEGPGPGPGPGGPGWWPASQSWKTNSCTAASSSSTSSSTIPDSSASVSASCTTTTSSLATTTSTTSSTSCCSSTPSGTITAARSSETGKNVSVTTINVPPNQDMHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNANVASTTGIGPNTGSGGSTSTQSIGIGVNVLSQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDVLSGSQSGEKIGDGEVEDGNGCYDGNDASQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGPSPGPMEQKFPIKPEPDFQSNPRFTFGSFHETGLPLVHGQQIQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGTGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHHQHQVAQGSPLHLPATASPVIPHHYSSSAPGSELSPEGHTATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASNIANDKLTTGGNCSPAPAGNEHHYPARHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMTGIQNAGMNPTRNNDTIPLLGVRGSGGSGIENDTDSSVECSSNGTTGNGNPSNRRDDRSCSSVSNVGNEQCAASISSSSQINNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_00982346;
80% Identity
iTF_01420330; iTF_01419694; iTF_01420982; iTF_01420314; iTF_01419676; iTF_01419678;