Basic Information

Insect: Tetragonula clypearis
Gene Symbol: ZNF236
Assembly: GCA_010645135.1
Location: WIUT01003444.1:12104-19688[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00084 0.14 13.5 2.8 3 23 2 22 1 22 0.96

2 26 9e-05 0.014 16.6 1.1 1 23 28 50 28 50 0.98

3 26 2.7e-06 0.00043 21.3 0.4 2 23 56 77 56 77 0.97

4 26 0.0072 1.1 10.6 0.3 3 23 85 105 83 105 0.96

5 26 5.8e-05 0.0093 17.1 0.9 2 23 116 137 116 137 0.98

6 26 6.4e-07 0.0001 23.3 1.1 1 23 158 180 158 180 0.99

7 26 2.7e-06 0.00044 21.3 0.7 1 20 186 205 186 208 0.95

8 26 2.4e-05 0.0039 18.4 0.7 1 23 214 237 214 237 0.95

9 26 0.0023 0.36 12.1 2.2 3 23 248 269 246 269 0.97

10 26 1.6e-06 0.00026 22.0 2.1 1 23 397 419 397 419 0.98

11 26 9.1e-05 0.015 16.5 3.5 1 23 425 447 425 447 0.99

12 26 0.0086 1.4 10.3 2.3 1 23 453 475 453 475 0.97

13 26 0.0022 0.35 12.2 6.7 1 23 564 586 564 586 0.98

14 26 2.9e-05 0.0047 18.1 5.1 1 23 592 614 592 614 0.99

15 26 0.00098 0.16 13.3 0.7 3 23 622 642 620 642 0.97

16 26 0.00035 0.056 14.7 7.6 1 23 648 670 648 670 0.98

17 26 2.1 3.3e+02 2.8 1.3 2 23 1090 1111 1089 1111 0.94

18 26 0.00061 0.097 13.9 1.3 1 23 1117 1139 1117 1139 0.98

19 26 0.081 13 7.3 0.4 6 23 1150 1167 1148 1167 0.95

20 26 1.2e-07 2e-05 25.6 1.3 2 23 1254 1275 1254 1275 0.98

21 26 0.00024 0.039 15.2 3.5 1 23 1281 1303 1281 1303 0.99

22 26 8.1e-05 0.013 16.7 1.9 1 23 1309 1331 1309 1331 0.98

23 26 0.00033 0.053 14.8 2.5 1 23 1337 1359 1337 1359 0.98

24 26 2.4e-06 0.00038 21.5 0.6 2 23 1607 1628 1606 1628 0.97

25 26 1.2e-05 0.0018 19.4 4.5 1 23 1634 1656 1634 1656 0.98

26 26 6.8e-07 0.00011 23.2 0.7 1 23 1662 1685 1662 1685 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00084	0.14	13.5	2.8	3	23	2	22	1	22	0.96
2	26	9e-05	0.014	16.6	1.1	1	23	28	50	28	50	0.98
3	26	2.7e-06	0.00043	21.3	0.4	2	23	56	77	56	77	0.97
4	26	0.0072	1.1	10.6	0.3	3	23	85	105	83	105	0.96
5	26	5.8e-05	0.0093	17.1	0.9	2	23	116	137	116	137	0.98
6	26	6.4e-07	0.0001	23.3	1.1	1	23	158	180	158	180	0.99
7	26	2.7e-06	0.00044	21.3	0.7	1	20	186	205	186	208	0.95
8	26	2.4e-05	0.0039	18.4	0.7	1	23	214	237	214	237	0.95
9	26	0.0023	0.36	12.1	2.2	3	23	248	269	246	269	0.97
10	26	1.6e-06	0.00026	22.0	2.1	1	23	397	419	397	419	0.98
11	26	9.1e-05	0.015	16.5	3.5	1	23	425	447	425	447	0.99
12	26	0.0086	1.4	10.3	2.3	1	23	453	475	453	475	0.97
13	26	0.0022	0.35	12.2	6.7	1	23	564	586	564	586	0.98
14	26	2.9e-05	0.0047	18.1	5.1	1	23	592	614	592	614	0.99
15	26	0.00098	0.16	13.3	0.7	3	23	622	642	620	642	0.97
16	26	0.00035	0.056	14.7	7.6	1	23	648	670	648	670	0.98
17	26	2.1	3.3e+02	2.8	1.3	2	23	1090	1111	1089	1111	0.94
18	26	0.00061	0.097	13.9	1.3	1	23	1117	1139	1117	1139	0.98
19	26	0.081	13	7.3	0.4	6	23	1150	1167	1148	1167	0.95
20	26	1.2e-07	2e-05	25.6	1.3	2	23	1254	1275	1254	1275	0.98
21	26	0.00024	0.039	15.2	3.5	1	23	1281	1303	1281	1303	0.99
22	26	8.1e-05	0.013	16.7	1.9	1	23	1309	1331	1309	1331	0.98
23	26	0.00033	0.053	14.8	2.5	1	23	1337	1359	1337	1359	0.98
24	26	2.4e-06	0.00038	21.5	0.6	2	23	1607	1628	1606	1628	0.97
25	26	1.2e-05	0.0018	19.4	4.5	1	23	1634	1656	1634	1656	0.98
26	26	6.8e-07	0.00011	23.2	0.7	1	23	1662	1685	1662	1685	0.97

Sequence Information

Coding Sequence: ATGTGCGACATTTGCCACCAAGAGTTTAGCAAACAAACGTTATATCGAAAACATATGGAAAATCATGCAGAAGAGAAACCACATCGATGTCCAAAATGTTCCGCCTCGTTCAACGTGCCGACAAACTTTACACTTCACATGGCAACTCACAACACAGGTGAACCAAAGTGTCCAGAATGCGGTAAAAAGTTTGCGAGAATGGCCAGCTTAAAGTCCCACATGTTGTTGcacgagaaggaagaaaatttgttcTGTACAGAATGTGAAGACGCTTTCTCCACGAAAACTCAGTTGGACGCGCATTTGAAGCTTCATGGGGAAAAGTGGACGATCGAAGAAGTACGAAAgtgtaaattatgtaataaacaGTTTAGTCAACCAGCCTTGTACAGACTTCATATTCGTGAACATTATAGATTGCAGACCAAAGTagtgaaacaaacgaaaaggGGGACAAAACACAAGACAATGTATAAATGTACTATATGTTTGAAGTCTTTTCAAAAGCCGAGTCAATTGATGCGGCACATTAGAGTGCATACCGGTGAAAAACCTTTCAAGTGTACGATATGCGGTCGCGCTTTCACGCAAAAGAGTTCGCTGCAAATCCATACGTGGCAACACAATGGTATCCGACCTCATGCCTGTGAATTTTGTAACGCCAAGTTTAGTCAAAAAGGCAATTTAAATGCTCATATAATGAGGGTTCACAATGTCCCAGAAGGAGAACCCATATACGGATGTAATTATTGTTCGTGCGTATTTAAAAAACTCGGCAGTTTGAACGGTCACATGAAACGTATGCACACAAATGTAAACGAGGAGAATGCCGCtaagaataatattcattcgaGCGACAGCGTGGAGTCCGATATACGTGCAACGGTGAATAACGTTATAACGCAACTGGCATCTTTGGAATCGAACGCTGATCAAACTACGGAATCGTCGAATTTCCAGTCGCCTCTATCGTCGGAAAGTACAGCGAGAAAGGATATCTTGCAACAAGCGTTGAAAAACAGCGGTCTTCCCAGTAAAAACAAAACTTCTGCTTCTCCCGAAGGTGTTCCGGAAGCGAAGAAGTTTGGAGCTCGGATTAACTTTGTAACGTTATTGGATCGAGCGCCTGACGGTGATACGAGaaaatatttgacgatAAAGCAACGATGCGTAGGAAACGTGAAATGGTACGCGTGTACGTTTTGTCACAAAGAGTTTAAGAAACCGTCAGATTTGATACGTCATTTGCGCGTACATACTCAAGAGAAGCCTTTCAAGTGTACCTACTGTCATCGTTCGTTCGCTTTGAAATCGACAATGATAGTACACGAACGCACGCATTCGAGTGTCAAACGTTACGCTTGCGGTTCTTGCGACAAAACGTTTGCGTGTCATAGCAGTTTGATCGCGCATACCAGATTGCACGCAAAGTCTGAAACCGGCATCGACAACGGTAAGGATGTTACCGACGCGCACGTTACGATCGAAACTGCCGATATCTACTCTGCCAATCGGTCGAAAACCCAAACGAAGggtaaatcaaaattatcacCGGAAGCGGAAAGTCTGGTACCTCAGGTGATCTTGCAGGAACCGTTGGTAATTAGCGACgcgggaaataaaatttccgtgGCTTCTCcgggaaagaagaaacgtgcTTGCGACGCAGCTGCTGATCAGGCCAGGCCTCATAAATGTTGGATTTGTCAGGCGGCGTTCAGAAAGGTCAGCCATTTGAAGCAACATCATCGTCGTCATACGGGAGAACGTCCGTACAAATGCACAAAATGCGATAGGAGATTCACATCGAATAGCGTTCTAAAGTCGCATTTGCACACTCACGAGGATTCGAGACCATACGGTTGCTCTGTTTGTAATGCGAAATTCTCTACGCAGAGGAGCGTGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAACACGAATTGGCACAGCGGCAATTGGAACAACAGAAAATGAGAATACAAGAACAAGCCTCGGACAAGTTGAACACGAGGGAAAGTCCTAAACAAGAAGCGGCTCTCGAAtcgtcttcttcctcttctgtCTCTGTCACTGCTATTAATTCCACCATTACCACCAACATTTCTATCACAACCACCGCCAGCATCAACGCCACTTCTCCCATCGTGACAACGTCCTCTTCTACGTTTTCAGATAATCTtgctctttcttctcgtcttGGATCGGTTGAATTGTCGTTTCAACCACAGCTCGGAACAGAGTTTTCGCAAGCTTTCtccgaatttcaaaatatcaccgaagaaaaggaaaaaataaggCCAGTTTTATCAACAAATTGCGACGCCACGACATTTATCAATCAGAACGTAGAAGGGATAGCCGTGACGAATCTGGAAAATTCGCCAATATTACAGGCCGACGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATACGAGAGATAGAAGAAACTTTAAATCAACAGTTTTTTAATATCGGAATGAACTTTAACTTGGGAGGGAGTAATCACTCGAGGCATTTAAACAGTGCAAACACGAGTGATTTTGGCCATATGAAAGAACAACAGCAGCCTGTGTTGAACGTTATATATGAAAACACcaccaacaacaacaatagcagcagcagcagcagcagcagcagcagcagcagaagcAATAGTAACAGCAACAGTAATGGCAACGTAGAAACATCCGGAGAACAACATGTATTTCCGACGCAATTAGATTCATTTGAGATGGATCATATTACTTTGCAATCGGACGGTGAAATCGACATTGGATTAGATACAAGAAATTCAACTAGCATGGCGAGCATACTGCCTAGGAATATGAAAGATGAGCATCGACTCTCTGTTTGCGTTGCCACACCGGACAACATAAACGTTGAACAGTCGGAAAAGTCTGGCGTGCAAGCAGTGGTATTTGTTTCTCAgacaaatttttccaaaaaggAAAACGCGACGAACGAGTTCGCTGTAGAAGAAACGcaaaaaaacaatattcacAAAGAATGTACGATCAATCAAATCTTTTTTACAGAAGAACTGCGGGGAACGACGCAAGACTTGAAGGTTCGATCAAATGTTCACGCTTTGCCACCCAATGTTGGAGAAATCGTTAAAACCGCTACGGGTAAAATATCCTGTGAACAATCTCTGTTACAGTGTCACATGTGCAGCCAACAAGGATTCACAACAGTCGGTTTGAAGGAACATTTGACGAGTCATCGTGGAACGAAGGAGTATCAATGTACAGAGtgttcttcgaaattttatacaaacgGTGGATTGAACAGACATTCGAAGATTCACGTCGTGAAACAATCGCTTAAATATTCGTCGTGTGAGAAGCAGTTCAACAACAGAGTCGAGCTGCGATCgcataataaaattcacgaaactTCAATGTGGAACGCTTCGGGTACGTCGAACCTGCCTGCTGCCAGTGCAGACAGTTTGGCGCTTTCGTCGGAAATGCATCGATCGCGGGTGGCAAATGGTCATCGTCATTCGCCAACAACAAACGATATCGGGATAGAACCAGATTCTACCGTTTCGGAGAAAGTTCTGCTGGATACAGTAGCTGAAAGAGAAGTAATGGATCAAGTAGATAACATATTGGCggggaaaaaggaacgaaaagaGTATACGAACAGATGCAAGTATTGCCCAAAAACTTTCCGCAAGCCGAGCGATCTGATAAGACACGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAACAAAAGCTTCGCCGTGAAATGTACTCTGGATTCTCACACGAAAGTTCATACGGGAAAAAAGACGTTTCGTTGTCACGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTCTGCATACGGgTTCAAAACCATTCAGATGTCCCATTTGCGATTCGAGATTTCGAACATCCGGCCATAGGAAGGTACACTTGTTGAAACACGCACGCGAACACAAAGACAACGCGAAAAGAAGGcaaaaacatttgaaagttGCGGTCATAGCAGAGGTGGCGGCAAATCTTGAAACATGTAAcgagaaggaaaggaaaatggACAGTTTCGAGGGAAAGCAACAATTAGAAgcggaagaggaggaggaggaggaggaggaggagcagcagcagcggcagcagcagcggcagcagcagcagcagcaacaacagcagcttTCGCAGACAGTCGCGGGATTAACGTCTCATCTAGAGACGTATAGTATTGAAACAGCAACGTCCTGTTTAACcgatcaaattaatttcgacgcgGAAGATAATATCGTGTCGAGCAACAATCAAACGATAGTGTCCATAAACGAGAGCAATCAGTTGGTCacgaatttacattttcttttgacGAACGGTCTCGTTACCATTCAAACGGAAGAATCGTTGTTGTCGCAAACATCCTCACCCTCGGTGAGCAACAACAATTCGCATAATCGACCGACGATCGAGCCGGATGGATGTGCGTTGTCCAGCGTTGTGTCCGATACGAACGAGCAGCATACCAAGGGAGAAATTCATATAGGACAAATGTTAAAAACGCCATCGAACAATTGCCTTTTGACAGTGTCAACAACGGTGACACCGCCGCGATTAGAGCAATGCTCGAAAGTGGCTACGGAAGAGACGTTGTCGGTGGTAGCCGATGACAAACCGACGATTAAAGGAAATCTTTCGAGAAAGGAGTGCGACATTTGTGGTAAAACGTTCACGAAACCGTATCAAGTCGAGAGGCATAAACGAATTCACACGGGTGAACGACCGTACAAGTGTGACCTGTGTACCAAATCGTTTGCTCAAAAATCAACTCTACAGATGCATCAGAAACATCATACTGGCGATCGGCCGTACGCTTGCCCGTACTGCGAATATTCCTTCACGCAGAAAGGCAATCTTCGAACGCACGTGAAACGCGTCCATCAGTTGGATACCGTGGACGTTAAGAAGTGGAAGCGCAGCCGTCAATCCTTCCTGTCGAAAACAACGACAACGTTTCAAGAAAACACTATCGAAGATAAGAGTCTAAATTTGGACAACATATCGTTTGTCGAGCTTCTTAAATAG
Protein Sequence: MCDICHQEFSKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTNVNEENAAKNNIHSSDSVESDIRATVNNVITQLASLESNADQTTESSNFQSPLSSESTARKDILQQALKNSGLPSKNKTSASPEGVPEAKKFGARINFVTLLDRAPDGDTRKYLTIKQRCVGNVKWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCHRSFALKSTMIVHERTHSSVKRYACGSCDKTFACHSSLIAHTRLHAKSETGIDNGKDVTDAHVTIETADIYSANRSKTQTKGKSKLSPEAESLVPQVILQEPLVISDAGNKISVASPGKKKRACDAAADQARPHKCWICQAAFRKVSHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQRSVKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKMRIQEQASDKLNTRESPKQEAALESSSSSSVSVTAINSTITTNISITTTASINATSPIVTTSSSTFSDNLALSSRLGSVELSFQPQLGTEFSQAFSEFQNITEEKEKIRPVLSTNCDATTFINQNVEGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNFNLGGSNHSRHLNSANTSDFGHMKEQQQPVLNVIYENTTNNNNSSSSSSSSSSSRSNSNSNSNGNVETSGEQHVFPTQLDSFEMDHITLQSDGEIDIGLDTRNSTSMASILPRNMKDEHRLSVCVATPDNINVEQSEKSGVQAVVFVSQTNFSKKENATNEFAVEETQKNNIHKECTINQIFFTEELRGTTQDLKVRSNVHALPPNVGEIVKTATGKISCEQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSLKYSSCEKQFNNRVELRSHNKIHETSMWNASGTSNLPAASADSLALSSEMHRSRVANGHRHSPTTNDIGIEPDSTVSEKVLLDTVAEREVMDQVDNILAGKKERKEYTNRCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNAKRRQKHLKVAVIAEVAANLETCNEKERKMDSFEGKQQLEAEEEEEEEEEEQQQRQQQRQQQQQQQQQLSQTVAGLTSHLETYSIETATSCLTDQINFDAEDNIVSSNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSSPSVSNNNSHNRPTIEPDGCALSSVVSDTNEQHTKGEIHIGQMLKTPSNNCLLTVSTTVTPPRLEQCSKVATEETLSVVADDKPTIKGNLSRKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDVKKWKRSRQSFLSKTTTTFQENTIEDKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00873923; iTF_01419766; iTF_01418473; iTF_01421051;
80% Identity: -