Basic Information

Insect: Tetragonula mellipes
Gene Symbol: ZNF236
Assembly: GCA_011634685.1
Location: WINE01005135.1:9045-16658[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0067 2 10.5 2.6 3 23 2 22 1 22 0.96

2 26 8e-05 0.023 16.5 1.1 1 23 28 50 28 50 0.98

3 26 2.4e-06 0.0007 21.3 0.4 2 23 56 77 56 77 0.97

4 26 0.0034 0.99 11.4 0.6 3 23 85 105 83 105 0.96

5 26 5.2e-05 0.015 17.1 0.9 2 23 116 137 116 137 0.98

6 26 5.7e-07 0.00017 23.3 1.1 1 23 158 180 158 180 0.99

7 26 2.4e-06 0.00071 21.3 0.7 1 20 186 205 186 208 0.95

8 26 2.1e-05 0.0063 18.3 0.7 1 23 214 237 214 237 0.95

9 26 0.002 0.59 12.1 2.2 3 23 248 269 246 269 0.97

10 26 1.4e-06 0.00042 22.0 2.1 1 23 397 419 397 419 0.98

11 26 8.1e-05 0.024 16.5 3.5 1 23 425 447 425 447 0.99

12 26 0.0077 2.2 10.3 2.3 1 23 453 475 453 475 0.97

13 26 0.0019 0.56 12.2 6.7 1 23 569 591 569 591 0.98

14 26 2.6e-05 0.0076 18.1 5.1 1 23 597 619 597 619 0.99

15 26 0.00087 0.25 13.3 0.7 3 23 627 647 625 647 0.97

16 26 0.00031 0.091 14.7 7.6 1 23 653 675 653 675 0.98

17 26 1.9 5.4e+02 2.8 1.3 2 23 1098 1119 1097 1119 0.94

18 26 0.00054 0.16 13.9 1.3 1 23 1125 1147 1125 1147 0.98

19 26 0.0018 0.52 12.3 1.4 2 23 1154 1175 1153 1175 0.96

20 26 8e-08 2.3e-05 26.0 1.4 2 23 1256 1277 1255 1277 0.98

21 26 0.00022 0.063 15.2 3.5 1 23 1283 1305 1283 1305 0.99

22 26 7.2e-05 0.021 16.7 1.9 1 23 1311 1333 1311 1333 0.98

23 26 0.00029 0.086 14.8 2.5 1 23 1339 1361 1339 1361 0.98

24 26 2.1e-06 0.00062 21.5 0.6 2 23 1626 1647 1625 1647 0.97

25 26 1e-05 0.003 19.3 4.5 1 23 1653 1675 1653 1675 0.98

26 26 6.1e-07 0.00018 23.2 0.7 1 23 1681 1704 1681 1704 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0067	2	10.5	2.6	3	23	2	22	1	22	0.96
2	26	8e-05	0.023	16.5	1.1	1	23	28	50	28	50	0.98
3	26	2.4e-06	0.0007	21.3	0.4	2	23	56	77	56	77	0.97
4	26	0.0034	0.99	11.4	0.6	3	23	85	105	83	105	0.96
5	26	5.2e-05	0.015	17.1	0.9	2	23	116	137	116	137	0.98
6	26	5.7e-07	0.00017	23.3	1.1	1	23	158	180	158	180	0.99
7	26	2.4e-06	0.00071	21.3	0.7	1	20	186	205	186	208	0.95
8	26	2.1e-05	0.0063	18.3	0.7	1	23	214	237	214	237	0.95
9	26	0.002	0.59	12.1	2.2	3	23	248	269	246	269	0.97
10	26	1.4e-06	0.00042	22.0	2.1	1	23	397	419	397	419	0.98
11	26	8.1e-05	0.024	16.5	3.5	1	23	425	447	425	447	0.99
12	26	0.0077	2.2	10.3	2.3	1	23	453	475	453	475	0.97
13	26	0.0019	0.56	12.2	6.7	1	23	569	591	569	591	0.98
14	26	2.6e-05	0.0076	18.1	5.1	1	23	597	619	597	619	0.99
15	26	0.00087	0.25	13.3	0.7	3	23	627	647	625	647	0.97
16	26	0.00031	0.091	14.7	7.6	1	23	653	675	653	675	0.98
17	26	1.9	5.4e+02	2.8	1.3	2	23	1098	1119	1097	1119	0.94
18	26	0.00054	0.16	13.9	1.3	1	23	1125	1147	1125	1147	0.98
19	26	0.0018	0.52	12.3	1.4	2	23	1154	1175	1153	1175	0.96
20	26	8e-08	2.3e-05	26.0	1.4	2	23	1256	1277	1255	1277	0.98
21	26	0.00022	0.063	15.2	3.5	1	23	1283	1305	1283	1305	0.99
22	26	7.2e-05	0.021	16.7	1.9	1	23	1311	1333	1311	1333	0.98
23	26	0.00029	0.086	14.8	2.5	1	23	1339	1361	1339	1361	0.98
24	26	2.1e-06	0.00062	21.5	0.6	2	23	1626	1647	1625	1647	0.97
25	26	1e-05	0.003	19.3	4.5	1	23	1653	1675	1653	1675	0.98
26	26	6.1e-07	0.00018	23.2	0.7	1	23	1681	1704	1681	1704	0.97

Sequence Information

Coding Sequence: ATGTGCGACATTTGTCACCAACAGTTTGGCAAACAAACGTTATATCGAAAACATATGGAAAATCATGCGGAAGAGAAGCCACATCGATGTCCAAAATGTTCCGCCTCGTTCAACGTGCCGACAAATTTTACACTTCACATGGCAACTCACAACACAGGTGAACCAAAGTGTCCAGAATGCGGTAAAAAGTTTGCGAGAATGGCCAGCTTAAAGTCCCACATGTTGTTGcacgagaaggaagaaaatttgttCTGTACAGAATGTGAAGATACTTTCTCCACGAAAACTCAGTTGGACGCACATTTGAAGCTTCATGGGGACAAGTGGACGATCGAAGAAGTACGAAAgtgtaaattatgtaataaacagTTTAGTCAACCAGCCTTGTACAGACTTCATATTCGTGAACATTATAGATTGCAGACCAAAGTAgtgaaacaaacgaaaagagGGACAAAACACAAGACGATGTATAAATGTACTATATGTTTGAAGTCTTTTCAAAAGCCGAGTCAATTGATGCGGCACATTAGAGTGCATACCGGTGAAAAACCTTTCAAGTGCACGATATGCGGTCGCGCTTTCACGCAAAAGAGTTCGCTGCAAATCCATACGTGGCAACACAATGGTATCCGACCTCACGCCTGTGAATTTTGTAACGCCAAGTTTAGTCAAAAAGGCAATTTAAATGCTCATATAATGAGGGTTCACAATGTCCCAGAAGGAGAACCCATATACGGATGTAATTATTGTTCGTGCGTATTTAAAAAACTCGGCAGTTTGAATGGTCACATGAAACGTATGCACACAAATGTAAACGAGGAGAATGCCGCTAAGGATAATATTCATTCGAGCGACAACGTGGAGTCCGATATACGTGCAACGGTGAATAACGTTATAACGCAACTGGCATCTTTGGAATCGAACGTTGATCAAACTACggaatcgtcgaatttcgagTCGCGTCTCTTGTCGGAAAGTACAGCGAGAAAGGATATCTTGCAACAAGCGTTGAAAAACAGCGGTCTTCCTAGTAAAAACAAAACTTCTGCTTCTTCCGAAGGTGTTCCGGAAGCGAAGAAGTTTGGAGCTCGGATTAACTTTGTAACGTTATTGGATCGAGCGCCTGACGGTGATACGAGaaaatatttgacgatAAAGCAACGATGCGTAGGAAACGTGAAATGGTACGCGTGTACGTTTTGTCACAAAGAGTTTAAAAAACCGTCAGATTTGATACGTCATTTGCGCGTACATACTCAAGAGAAGCCTTTCAAGTGTACCTACTGTCATCGTTCGTTCGCTTTGAAATCGACAATGATAGTACACGAACGCACGCATTCGAGTGTCAAACGTTACGCTTGCGGTTCTTGCGACAAAACGTTTGCGTGTCATAGCAGTTTGATTGCGCATACCAGATTGCATGCAAAGTCTGAAACTGGTAACGATGAAACCGGCATCGACGACGGTAAGGATGTTACCGACGCGCACGTTACGATCGAAACTGCCGATATTTACTCTGCCAATCGGTCGAAAACCCAAACGAAGGGCAAATCAAAATTATCACCGGAAGCAGAAAGTCTGGTACCTCAGGTGATCTTGCAGGAACCGTTGGTAATTAGCGACacgggaaataaaatttccgtgGCTTCTCCGGGAAAGAAGAAACGTGCTTGTGACGCAGCTGCTGATCAGGCCAGGCCTCATAAATGTTGGATTTGTCAGGCGGCGTTCAGAAAGGTCAGCCATTTGAAGCAACATCATCGTCGTCATACGGGAGAACGTCCGTACAAATGCACAAAATGCGATAGGAGATTCACATCGAATAGCGTTCTAAAATCGCATTTGCACACACACGAGGATTCGAGACCATACGGTTGCTCTGTTTGTAATGCGAAATTCTCTACGCAGAGGAGCGTGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAACACGAATTGGCACAGCGGCAGTTGGAACAACAGAAAATGAGAATACAAGAACAAGCCTCGGACAAGTTGAACACGAGGGAAAGTCCTAAACAAGAAGCGGCTCTCGAatcgtcttcttcctcttctgtcTCTGTCACTACTATTAATTCCACCATTACCACCAACATTTCTATCGCAACCACCGCCAGCATCAACGCCACTTCTCCCATCGTGACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTTCTCGTCTTGGATCGGTTGAATTGTCGTTTCAACCACAGCTCGGAACAGAGTTTTCGCAAGCTTTCtccgaatttcaaaatatcaccgaagaaaaggaaaaaataaggCCAGTTTTATCGACAAATTGCGATGCCACGACATTTATCAATCAGAACGTAGGAGGGATAGCCGTGACGAATCTGGAAAATTCGCCAATATTACAGGCCGACGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATacgagaaatagaagaaacttTAAATCAACAGTTTTTTAATATCGGAATGAACTTTAACTTGGGAGGGAGTAATCACTCGAGGCATTTAAACAGTGCAAACACGAGTGATTTTGGCCATATGAAAGAACAACAGCAGCCTGTGTTGAACGTTATATATGAAaacaccagcagcagcagcagcaacaacaacaacaacaacaacaacagtagcagcagcaacagcagcaataGTAACAGCAACAGTAATGGCAACGTAGAAACATCCGGAGAACATGTATTTCCGACGCAATTAGATTCATTTGAGATGGATCATATTACTTTGCAATCGGACGGTGAAATCGACATTGGATTAGATACAAGAAATTCAACCAGCATGGCGAGCATACTGCCTAGGAATATGAAAGATGAGCATCGACTCTCTGTTTGCGTTGCGACACCGGATAACATAAACGTTGAACAGCCGGAAAAGTCTGGTGTGCAAGCAGTGGTATTTGTCTCTCagacaaatttttccaaaaaggAAAACGCAACGAACGAGTTCGCTGTAGAAGAAACGCAAAAAAACAATATTCACAAAGAATGTACGATCGATCAAATCTTTTTTACAGAAGAACTGCGGGGAACGACGCAAGACTTGAAGGTTCGATCAAATGTGCACGCTTTGCCACCCAATGTTGGAGAAATCGTCAATGTTAAAACGGCTACGGGTAAAATGTCCTGTGAACAATCTCTGTTACAGTGTCACATGTGCAGCCAACAAGGATTCACAACAGTCGGTTTGAAGGAACATTTGACGAGTCATCGTGGAACGAAGGAGTATCAATGTACAGAGtgttcttcgaaattttatacaaacggTGGATTGAACAGACATTCGAAGATTCACGTCGTCAAACAATCGCTTAAATGTTCGTCGTGTGAGAAGCAGTTCAACAACAGAGTCGAGCTGCGATCGcataataaaattcacgaaacttCAATGTGGAACGCTTCGGGTGCTGCCAGTGCAGACAGTTTGGCGCTTTCGTCGGAAATGCATCGATCGCGGGTGGCAAATGGTCATCGTCATTCGCCAACAAACGATATCGGGATAGAACCAGATTCTACCGTTTCGGAGAAAGTTCTGCTGGATACAGTAGCTGAAAGAGAAGTAATGGATCAAGTAGATAACATATTGGCggggaaaaaggaacgaaaagagTATACGAACAAATGCAAGTATTGTCCAAAAACTTTCCGCAAGCCGAGCGATCTGATAAGACACGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAACAAAAGCTTCGCCGTGAAATGTACTCTGGATTCTCATACGAAAGTTCATACGGGAAAAAAGACGTTTCGTTGTCACGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTCTGCATACGGGTTCGAAACCATTCAGATGTCCCATTTGCGATTCGAGATTTCGAACGTCCGGCCATAGGAAGGTGCACTTGTTGAAACACGCACGCGAACACAAAGACAACGCGAAAAGAAGGcaaaaacatttgaaagttGCGGTCATAGCAGAGGTGGCGGCAAATCTTGAAAGATGTaacgagaaggaaagaaaaatggacaGTTTCGAGGGAAAGCAACAATTAGAAgcggaagaggaggaggaggagaaggagaaggaggaggaggagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcagctttcGCAGACAGTCGCGGGATTAACGTCTCATCTAGAGACGTATAGTATTGAAACAGCAACGTCCTGTTTAACcgatcaaattaatttcgacgcGGAAGATAATATCGTGTCGAACAACAATCAAACGATAGTGTCCATAAACGAAAGCAATCAGTTGGTTacgaatttacattttcttttgacGAACGGTCTCGTTACCATTCAAACCGAAGAATCGTTGTTGTCGCAAACATCCTCACCCTCGGTTAACAACAATTCGCATCATCGATCGACTATCGGGCTTCCCGACCCGGATGGATGTGCGTTGTCCAGCGTTGTGTCCGATACGAACGAGCAGCATACCAAGGGAGAAATTCATATAGGACAAATGTTAAAAACGCCATCGAACAATTGCCTTTTAACAGTGTCGACAACCGTGACACCGCCGCGATTAGAGCAATGCTCGAAAGTGGCTACGGAAGAGACGTTGTCGGTGGTAGCCGATGACAAACCGACgattaaaggaaataatctGTCGAGAAAGGAGTGCGACATTTGTGGTAAAACGTTCACGAAACCGTATCAAGTCGAGAGGCATAAACGAATTCACACGGGTGAACGACCGTACAAGTGTGACCTGTGTACCAAATCGTTTGCTCAAAAATCAACTCTACAGATGCATCAGAAACATCACACTGGCGATCGGCCGTACGCTTGCCCGTACTGCGAATATTCCTTCACGCAGAAAGGCAATCTTCGAACGCACGTGAAACGCGTCCATCAGTTGGATACCGTGGACGTTAAGAAGTGGAAGCGCAGCCGTCAATCCTTCCTGTCGAAAACAACGATGTTTCAAGAAAACACTATCGAAGATAAGAGTCTAAATTTGGACAACATATCGTTCGTAGAGCTTCTTAAATAG
Protein Sequence: MCDICHQQFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDTFSTKTQLDAHLKLHGDKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTNVNEENAAKDNIHSSDNVESDIRATVNNVITQLASLESNVDQTTESSNFESRLLSESTARKDILQQALKNSGLPSKNKTSASSEGVPEAKKFGARINFVTLLDRAPDGDTRKYLTIKQRCVGNVKWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCHRSFALKSTMIVHERTHSSVKRYACGSCDKTFACHSSLIAHTRLHAKSETGNDETGIDDGKDVTDAHVTIETADIYSANRSKTQTKGKSKLSPEAESLVPQVILQEPLVISDTGNKISVASPGKKKRACDAAADQARPHKCWICQAAFRKVSHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQRSVKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKMRIQEQASDKLNTRESPKQEAALESSSSSSVSVTTINSTITTNISIATTASINATSPIVTTSSSTFSDNLALSSRLGSVELSFQPQLGTEFSQAFSEFQNITEEKEKIRPVLSTNCDATTFINQNVGGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNFNLGGSNHSRHLNSANTSDFGHMKEQQQPVLNVIYENTSSSSSNNNNNNNNSSSSNSSNSNSNSNGNVETSGEHVFPTQLDSFEMDHITLQSDGEIDIGLDTRNSTSMASILPRNMKDEHRLSVCVATPDNINVEQPEKSGVQAVVFVSQTNFSKKENATNEFAVEETQKNNIHKECTIDQIFFTEELRGTTQDLKVRSNVHALPPNVGEIVNVKTATGKMSCEQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSLKCSSCEKQFNNRVELRSHNKIHETSMWNASGAASADSLALSSEMHRSRVANGHRHSPTNDIGIEPDSTVSEKVLLDTVAEREVMDQVDNILAGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNAKRRQKHLKVAVIAEVAANLERCNEKERKMDSFEGKQQLEAEEEEEEKEKEEEEQQQQQQQQQQQQQQQQQQQQQQQQQQQQLSQTVAGLTSHLETYSIETATSCLTDQINFDAEDNIVSNNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSSPSVNNNSHHRSTIGLPDPDGCALSSVVSDTNEQHTKGEIHIGQMLKTPSNNCLLTVSTTVTPPRLEQCSKVATEETLSVVADDKPTIKGNNLSRKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDVKKWKRSRQSFLSKTTMFQENTIEDKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_01419123;
80% Identity: -