Basic Information

Insect: Tetragonula carbonaria
Gene Symbol: ZNF236
Assembly: GCA_010645115.1
Location: WIUU01005554.1:1-7567[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0039 0.53 11.4 2.3 2 23 185 206 184 206 0.96

2 23 8e-05 0.011 16.7 1.1 1 23 212 234 212 234 0.98

3 23 2.4e-06 0.00033 21.5 0.4 2 23 240 261 240 261 0.97

4 23 0.0034 0.47 11.6 0.6 3 23 269 289 267 289 0.96

5 23 5.2e-05 0.0072 17.3 0.9 2 23 300 321 300 321 0.98

6 23 5.7e-07 7.9e-05 23.5 1.1 1 23 342 364 342 364 0.99

7 23 2.4e-06 0.00033 21.5 0.7 1 20 370 389 370 392 0.95

8 23 2.1e-05 0.003 18.5 0.7 1 23 398 421 398 421 0.95

9 23 0.002 0.28 12.3 2.2 3 23 432 453 430 453 0.97

10 23 1.4e-06 0.0002 22.2 2.1 1 23 581 603 581 603 0.98

11 23 8e-05 0.011 16.7 3.5 1 23 609 631 609 631 0.99

12 23 0.0076 1.1 10.5 2.3 1 23 637 659 637 659 0.97

13 23 0.0019 0.26 12.4 6.7 1 23 753 775 753 775 0.98

14 23 2.6e-05 0.0036 18.3 5.1 1 23 781 803 781 803 0.99

15 23 0.00086 0.12 13.5 0.7 3 23 811 831 809 831 0.97

16 23 0.00031 0.043 14.9 7.6 1 23 837 859 837 859 0.98

17 23 1.8 2.6e+02 3.0 1.3 2 23 1219 1240 1218 1240 0.94

18 23 0.00054 0.074 14.1 1.3 1 23 1246 1268 1246 1268 0.98

19 23 0.0018 0.24 12.5 1.4 2 23 1275 1296 1274 1296 0.96

20 23 7.9e-08 1.1e-05 26.2 1.4 2 23 1377 1398 1376 1398 0.98

21 23 0.00022 0.03 15.4 3.5 1 23 1404 1426 1404 1426 0.99

22 23 7.2e-05 0.01 16.9 1.9 1 23 1432 1454 1432 1454 0.98

23 23 0.00029 0.04 14.9 2.5 1 23 1460 1482 1460 1482 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0039	0.53	11.4	2.3	2	23	185	206	184	206	0.96
2	23	8e-05	0.011	16.7	1.1	1	23	212	234	212	234	0.98
3	23	2.4e-06	0.00033	21.5	0.4	2	23	240	261	240	261	0.97
4	23	0.0034	0.47	11.6	0.6	3	23	269	289	267	289	0.96
5	23	5.2e-05	0.0072	17.3	0.9	2	23	300	321	300	321	0.98
6	23	5.7e-07	7.9e-05	23.5	1.1	1	23	342	364	342	364	0.99
7	23	2.4e-06	0.00033	21.5	0.7	1	20	370	389	370	392	0.95
8	23	2.1e-05	0.003	18.5	0.7	1	23	398	421	398	421	0.95
9	23	0.002	0.28	12.3	2.2	3	23	432	453	430	453	0.97
10	23	1.4e-06	0.0002	22.2	2.1	1	23	581	603	581	603	0.98
11	23	8e-05	0.011	16.7	3.5	1	23	609	631	609	631	0.99
12	23	0.0076	1.1	10.5	2.3	1	23	637	659	637	659	0.97
13	23	0.0019	0.26	12.4	6.7	1	23	753	775	753	775	0.98
14	23	2.6e-05	0.0036	18.3	5.1	1	23	781	803	781	803	0.99
15	23	0.00086	0.12	13.5	0.7	3	23	811	831	809	831	0.97
16	23	0.00031	0.043	14.9	7.6	1	23	837	859	837	859	0.98
17	23	1.8	2.6e+02	3.0	1.3	2	23	1219	1240	1218	1240	0.94
18	23	0.00054	0.074	14.1	1.3	1	23	1246	1268	1246	1268	0.98
19	23	0.0018	0.24	12.5	1.4	2	23	1275	1296	1274	1296	0.96
20	23	7.9e-08	1.1e-05	26.2	1.4	2	23	1377	1398	1376	1398	0.98
21	23	0.00022	0.03	15.4	3.5	1	23	1404	1426	1404	1426	0.99
22	23	7.2e-05	0.01	16.9	1.9	1	23	1432	1454	1432	1454	0.98
23	23	0.00029	0.04	14.9	2.5	1	23	1460	1482	1460	1482	0.98

Sequence Information

Coding Sequence: ATGGAAAAAATGTTGACGCGACAGAATGTGGTTGCAGAATCTTCGCACGTCGAAACGATACCTATAAATTTTGTTGCTACCGAGGATGGTCAAACTCTTTTAGCATTGACGGAGCATAAAGACGATATGTTGGAAATTGTTGCAACTCCAGTCATGCTTGTCGGACAAAGTGGAACAGCCACGTCATTGATagatgtgaaaaatttaaatggaaatttaatattacactCGCCTGTTTTTCAAATAAGCGTGGAAAATATCGTCAACGAGTCTGAACTGCAACGGTCGACGCAAGGCTTGGAACCAGAATCATCCAACGACGTTGATCGGATGAAGTTGCAGCAATCGTGCAGAGAACTGACCTTTAACGAAACACATACGCAAGAGTATCAGTCTCTTTCTCAGAATGAATTGCCAGATagcgaaaaggaaagaaatgaaagatctTCCAAGGAGAAGCCGATAAATCTAGTTGCGAAAAAAAGTAACTGCGGAAGACCTAAGAAAAGCAAGGCAATCTCTTCGATTTCTTCGCAAAACACGGATAGCTTGATGTGCGACATTTGTCACCAACAGTTTGGCAAACAAACGTTATATCGAAAACATATGGAAAATCATGCGGAAGAGAAACCACATCGATGTCCAAAATGTTCCGCCTCGTTCAACGTGCCGACAAATTTTACACTTCACATGGCAACTCACAACACAGGTGAACCAAAGTGTCCAGAATGCGGTAAAAAGTTTGCGAGAATGGCCAGCTTAAAGTCCCACATGTTGTTGcacgagaaggaagaaaatttgttcTGTACAGAATGTGAAGATACTTTCTCCACGAAAACTCAGTTGGACGCACATTTGAAGCTTCATGGGGAAAAGTGGACGATCGAAGAAGTACGAAAgtgtaaattatgtaataaacaGTTTAGTCAACCAGCCTTGTACAGACTTCATATTCGTGAACATTATAGATTGCAGACCAAAGTagtgaaacaaacgaaaagagGGACAAAACACAAGACGATGTATAAATGTACTATATGTTTGAAGTCTTTTCAAAAGCCGAGTCAATTGATGCGGCACATTAGAGTGCATACCGGTGAAAAACCTTTCAAGTGCACGATATGCGGTCGCGCTTTCACGCAAAAAAGTTCGCTGCAAATCCATACGTGGCAACACAATGGTATCCGACCTCATGCCTGTGAATTTTGTAACGCCAAGTTTAGTCAAAAAGGCAATTTAAATGCTCATATAATGAGGGTTCACAATGTCCCAGAAGGAGAACCCATATACGGATGTAATTATTGTTCGTGCGTATTTAAAAAACTCGGCAGTTTGAATGGTCACATGAAACGTATGCACACAAATGTAAACGAGGAGAATGCCGCTAAGGATAATATTCATTCGAGCGACAACGTGGAGTCCGATATACGTGCAACCGTGAATAACGTTATAACGCAACTGGCATCTTTGGAATCGAACGTTGATCAAACTACggaatcgtcgaatttcgaGTCGCGTCTCTTGTCGGAAAGTACAGCGAGAAAGGATATCTTGCAACAAGCGTTGAAAAACAGCGGTCTTCCTAGTAAAAACAAAACTTCTGCTTCTTCCGAAGGTGTTCCGGAAGCGAAGAAGTTTGGAGCTCGGATTAACTTTGTAACGTTATTGGATCGAGCGCCTGACGGTGATACGAGaaaatatttgacgatAAAGCAACGATGCGTAGGAAACGTGAAATGGTACGCGTGTACGTTTTGTCACAAAGAGTTTAAAAAACCGTCAGATTTGATACGTCATTTGCGCGTACATACTCAAGAGAAGCCTTTCAAGTGTACCTACTGTCATCGTTCGTTCGCTTTGAAATCGACAATGATAGTACACGAACGCACGCATTCGAGTGTCAAACGTTACGCTTGCGGTTCTTGCGACAAAACGTTTGCGTGTCATAGCAGTTTGATTGCGCATACCAGATTGCATGCAAAGTCTGAAACTGGTAACGATGAAACCGGCATCGACGACGGTAAGGATGTTACCGACGCGCACGTTACGATCGAAACTGCCGATATTTACTCTGCCAATCGGTCGAAAACTCAAACGAAGGGCAAATCAAAATTATCACCGGAAGCAGAAAGTCTGGTACCTCAGGTGATCTTGCAGGAACCGTTGGTAATTAGCGACacgggaaataaaatttccgtgGCTTCTCcgggaaagaagaaacgtgcTTGTGACGCAGCTGCTGATCAGGCCAGGCCTCATAAATGTTGGATTTGTCAGGCGGCGTTCAGAAAGGTCAGCCATTTGAAGCAACATCATCGTCGTCATACGGGAGAACGTCCGTACAAATGCACAAAATGCGATAGGAGATTCACATCGAATAGCGTTCTAAAATCGCATTTGCACACACACGAGGATTCGAGACCATACGGTTGCTCTGTTTGTAATGCGAAATTCTCTACGCAGAGGAGCGTGAAAAGACACTTGGTTACTCACAGTAACAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACatgaaaatacataaacaCGAATTGGCACAGCGGCAATTGGAACAACAGAAAATGAGAATACAAGAACAAGCCTCGGACAAGTTGAACACGAGGGAAAGTCCTAAACAAGAAGCGGCTCTCGAAtcgtcttcttcctcttctgtCTCTGTCACTACTATTAATTCCACCATTACCACCAACATTTCTATCGCAACCACCGCCAGCATCAACGCCACTTCTCCCATCGTGACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTTCTCGTCTTGGATCGGTTGAATTGTCGTTTCAACCACAGCTCGGAACAGAGTTTTCGCAAGCTTTCTccgaatttcaaaatatcaccgaagaaaaggaaaaaataaggCCAGTTTTATCGACAAATTGCGATGCCACGACATTTATCAATCAGAACGTAGGAGGGATAGCCGTGACGAATCTGGAAAATTCGCCAATATTACAGGCCGACGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATacgagaaatagaagaaacttTAAATCAACAGTTTTTTAATATCGGAATGAACTTTAACTTGGGAGGGAGTAATCACTCGAGGCATTTAAACAGTGCAAACACGAATTCATTTGAGATGGATCATATTACTTTGCAATCGGACGGTGAAATCGACATTGGATTAGATACAAGAAATTCAACCAGCATGGCGAGCATACTGCCTAGGAATATGAAAGATGAGCATCGACTCTCTGTTTGCGTTGCGACACCGGATAACATAAACATTGAACAGCCGGAAAAGTCTGGTGTGCAAGCAGTGGTATTTGTCTCTCAgacaaatttttccaaaaaggAAAACGCAACGAACGAGTTCGCTGTAGAAGAAACGcaaaaaaacaatattcacAAAGAATGTACGATCGATCAAATCTTTTTTACAGAAGAACTGCGGGGAACGACGCAAGACTTGAAGGTTCGATCAAATGTGCACGCTTTGCCACCCAATGTTGGAGAAATCGTCAATGTTAAAACGGCTACGGGTAAAATGTCCTGTGAACAATCTCTGTTACAGTGTCACATGTGCAGCCAACAAGGATTCACAACAGTCGGTTTGAAGGAACATTTGACGAGTCATCGTGGAACGAAGGAGTATCAATGTACAGAGtgttcttcgaaattttatacaaacgGTGGATTGAACAGACATTCGAAGATTCACGTCGTCAAACAATCGCTTAAATGTTCGTCGTGTGAGAAGCAGTTCAACAACAGAGTCGAGCTGCGATCgcataataaaattcacgaaactTCGATGTGGAACGCTTCGGGTGCTGCCAGTGCAGACAGTTTGGCGCTTTCGTCGGAAATGCATCGATCGCGGGTGGCAAATGGTCATCGTCATTCGCCAACAAACGATATCGGGATAGAACCAGATTCTACCGTTTCGGAGAAAGTTCTGCTGGATACAGTAGCTGAAAGAGAAGTAATGGATCAAGTAGATAACATATTGGCggggaaaaaggaacgaaaagagTATACGAACAAATGCAAGTATTGCCCAAAAACTTTCCGCAAGCCGAGCGATCTGATAAGACACGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAACAAAAGCTTCGCCGTGAAATGTACTCTGGATTCTCATACGAAAGTTCATACGGGAAAAAAGACGTTTCGTTGTCACGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTCTGCATACGGGTTCGAAACCATTCAGATGTCCCATTTGCGATTCGAGATTTCGAACGTCCGGCCATAGGAAGGTGCACTTGTTGAAACACGCACGCGAACACAAAGACAACGCGAAAAGAAGGCAAAAACATTTGAAAGTTGCGGTCATAGCAGAGGTGGCGGCAAATCTTGAAAGATGTaacgagaaggaaagaaaaatggacaGTTTCGAGGGAAAGCAACAATTAGAAgcggaagaggaggaggaggagaaggaggaggaggagcagcagcagcagcagcagcagca
Protein Sequence: MEKMLTRQNVVAESSHVETIPINFVATEDGQTLLALTEHKDDMLEIVATPVMLVGQSGTATSLIDVKNLNGNLILHSPVFQISVENIVNESELQRSTQGLEPESSNDVDRMKLQQSCRELTFNETHTQEYQSLSQNELPDSEKERNERSSKEKPINLVAKKSNCGRPKKSKAISSISSQNTDSLMCDICHQQFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDTFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTNVNEENAAKDNIHSSDNVESDIRATVNNVITQLASLESNVDQTTESSNFESRLLSESTARKDILQQALKNSGLPSKNKTSASSEGVPEAKKFGARINFVTLLDRAPDGDTRKYLTIKQRCVGNVKWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCHRSFALKSTMIVHERTHSSVKRYACGSCDKTFACHSSLIAHTRLHAKSETGNDETGIDDGKDVTDAHVTIETADIYSANRSKTQTKGKSKLSPEAESLVPQVILQEPLVISDTGNKISVASPGKKKRACDAAADQARPHKCWICQAAFRKVSHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQRSVKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKMRIQEQASDKLNTRESPKQEAALESSSSSSVSVTTINSTITTNISIATTASINATSPIVTTSSSTFSDNLALSSRLGSVELSFQPQLGTEFSQAFSEFQNITEEKEKIRPVLSTNCDATTFINQNVGGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNFNLGGSNHSRHLNSANTNSFEMDHITLQSDGEIDIGLDTRNSTSMASILPRNMKDEHRLSVCVATPDNINIEQPEKSGVQAVVFVSQTNFSKKENATNEFAVEETQKNNIHKECTIDQIFFTEELRGTTQDLKVRSNVHALPPNVGEIVNVKTATGKMSCEQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSLKCSSCEKQFNNRVELRSHNKIHETSMWNASGAASADSLALSSEMHRSRVANGHRHSPTNDIGIEPDSTVSEKVLLDTVAEREVMDQVDNILAGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNAKRRQKHLKVAVIAEVAANLERCNEKERKMDSFEGKQQLEAEEEEEEKEEEEQQQQQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_01419123;
80% Identity: -