Tcly016750.1
Basic Information
- Insect
- Tetragonula clypearis
- Gene Symbol
- lolal
- Assembly
- GCA_010645135.1
- Location
- WIUT01003276.1:16942-18807[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-32 2.9e-29 102.2 0.3 4 109 24 125 21 126 0.94
Sequence Information
- Coding Sequence
- atGTCTGGAGAACAATTTTCCCTGGTTTGGAACAGTTTCCCAAGAAATTTATCCTCCGGATTATACACATTATTAACTGATGAACAATTAGTTGATGTAACGTTAGCTGCCGAGGGTCAGATACTACGTGCTCATAAGTTAATATTGTCAGTTTGCAGTACGTATTTCAAGGAATTGTTCAAGGGAAACTCTTGCAAACAtccaattgtaattttaaaagatgTCAACTACCGCGATCTGTCAGCAATGCTTCACTTTATGTATCAAGGAGAAGTTAACATTAAACAAGAAGACATTGCTAGTTTCTTGAAAGTGGCAGAGACTTTACAAATAAAAGGCTTAACGACAGAAACAGGAGAAaaACTTGAAGAAACATTAACGAAGAATGCAGACAACTTGGATCATATATTTAATGCAGAAGACAGCAGTATTAATTCTGTCAATTCGGATACAAATGCTCCTATTTTTGACGAACAAAGACAGTTTATAGAGAAGAACCAACAATGTCAAAAACAATGTGTATTATCGAAAGATGATCTacttaataatgaatttacagaaaatacTAATGTCAGTGACATGCATTGTCAACAAGAATCTTTTGATTCAGCACATAACATACAAGATGTACAAACTGTAGAAAACAACATTTCTACAAGTGTAgaagacgaagaggaagagcCACTAGATTGTACAGCTGATATAAGTCATATGGAGTCAAAGCATGAACCATTGGATTATACAATTGACGTAGATACAGAAGCAGGATATAAAACATGTTTGCCTAACGAATCGCTTTATAAACCTGAAGAAAATTTACAGACAAAagattacATGCCAGATATGCAATTAGTACCCTACAGTCAAAATACACAAACTCAATCGTTCGGTTTAAGTAACATGTCTAGTTTCGAAAGTGAATTTACATACGAAACTGGTTGTCATGGTAAAGGTCGCCGAACTGTTAAAGGTATATCCAATAATAGTTTGCCACTGGAAACAACTTTACGCGTTGTATCTGAATTGGGACCAACTTTGCGTATGGAGAGAGGCAAAGTTATTCGAATGTATTCATGTCCATGGTGTCTTCGTCATTTTACGCGTAAGGAAAATCTTAAATTACATGTTCGATATATTCACGGTCCGCTTGAAAGCCTAACGTGTAGACTTTGcggtaataaatataaaaacagtAACAGTTTACGTGTACATTCGTATCTGTATCATAATGCCAAACGCGACAAACCTAATAAGTCAATAATAGATGGTGGcgcatga
- Protein Sequence
- MSGEQFSLVWNSFPRNLSSGLYTLLTDEQLVDVTLAAEGQILRAHKLILSVCSTYFKELFKGNSCKHPIVILKDVNYRDLSAMLHFMYQGEVNIKQEDIASFLKVAETLQIKGLTTETGEKLEETLTKNADNLDHIFNAEDSSINSVNSDTNAPIFDEQRQFIEKNQQCQKQCVLSKDDLLNNEFTENTNVSDMHCQQESFDSAHNIQDVQTVENNISTSVEDEEEEPLDCTADISHMESKHEPLDYTIDVDTEAGYKTCLPNESLYKPEENLQTKDYMPDMQLVPYSQNTQTQSFGLSNMSSFESEFTYETGCHGKGRRTVKGISNNSLPLETTLRVVSELGPTLRMERGKVIRMYSCPWCLRHFTRKENLKLHVRYIHGPLESLTCRLCGNKYKNSNSLRVHSYLYHNAKRDKPNKSIIDGGA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684229;
- 90% Identity
- iTF_01419311; iTF_01417777; iTF_01418039; iTF_00983292; iTF_00983037; iTF_00982360; iTF_00982614; iTF_01420344; iTF_01419953; iTF_01420998; iTF_01418664; iTF_01419708; iTF_01418464; iTF_00874110; iTF_00873865;
- 80% Identity
- iTF_01419311;