Emex009694.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eufriesea mexicana
Gene Symbol
lolal
Assembly
GCA_001483705.1
Location
NW:218521-221202[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-32 2e-30 104.4 0.4 4 109 24 125 21 126 0.94

Sequence Information

Coding Sequence
atgtcTGGAGAACAGTTTTCCTTAGTTTGGAATAGTTTTCCAAGAAATTTGTCTTCTGGATTATATACATTGTTAACTGATGAACAGTTGGTTGACGTAACATTAGCTGCAGAGGGTCAAATACTCCGTgcacataaattaatattgtcagtTTGTAGCACATATTTCAGGGAATTGTTCAAGGGAAACTCTTGTAAACATCCAATTGTGATCTTAAAAGATGTCAATTATCGTGATTTATCAGCAATGCTTCACTTTATGTATCAGGGAGAAGTTAATATTAAGCAAGAAGATATTGCTAGTTTCTTGAAAGTAGCAGAAACTTTACAAATAAAAGGCTTAACCACTGAAACAGAAGAGaaaCTTGAAGAAACTTTAACGAAGAATGCAGAAAACTTGgatcaaatatttaatacagaGAGAAGCAGTATTAAATCTGTTAAATCAGATGTAAATGCCCCAGTTTTTGAGGAACAAAAACAATTTGTACAGAAGAGTCAACAATGCCAAAAACAATGTGTTTTATCAAAAgataaattacataataatgaatttatagAGAACACAAATATCAGTGATATGTGTTGTCAACAAGATTCTACTTCTGATTCAACTTATAATATACATGATATGCATATGATGCAAGACAATGCTGCTACAAATATAGAAGATGAACCACTAGACTGTACAGCTGATATAGGTCATACAGAAACAGCAAAGCATGAACCATTGGATTATACACTTGATGTAGATACAGAAACGGGATACAAGACATGTTTGCCCAATGAGTCACTTTATAAACCTGAAGAAAATTTACAAACAAAagATCATGTACCAGATATGCAGTTAGTTCCCTACAATCAGGATGCACAAACTCAACCATTTGGTTTAAGTAACATGACTGGTTTTGAAAGTGAATTTACGTACGAAACTGGTTGTCATAGTAAAGGTCGACGAACTGTTAAAGGTATTTCCAACAACAGTTTGCCATTGGAAACCACTTTGCGCGTTATATCCGAACTGGGACCAACTTTACGTATGGAAAGAGGCAAGGTTATTCGAATGTACTCATGTCCATGGTGTCTTCGTCATTTTACGCGTAAGGAAAATTTGAAACTACATGTCCGATATATACACGGTCCGCTTGAAAGTCTAACGTGTAAACTTTGtggtaataaatataagaacagTAACAGTCTACGTGTACATTCGTATCTCTATCATAATGCTAAGCGAGATAAACCTAATAAACCATTAGTGGATGGTGGtgcatga
Protein Sequence
MSGEQFSLVWNSFPRNLSSGLYTLLTDEQLVDVTLAAEGQILRAHKLILSVCSTYFRELFKGNSCKHPIVILKDVNYRDLSAMLHFMYQGEVNIKQEDIASFLKVAETLQIKGLTTETEEKLEETLTKNAENLDQIFNTERSSIKSVKSDVNAPVFEEQKQFVQKSQQCQKQCVLSKDKLHNNEFIENTNISDMCCQQDSTSDSTYNIHDMHMMQDNAATNIEDEPLDCTADIGHTETAKHEPLDYTLDVDTETGYKTCLPNESLYKPEENLQTKDHVPDMQLVPYNQDAQTQPFGLSNMTGFESEFTYETGCHSKGRRTVKGISNNSLPLETTLRVISELGPTLRMERGKVIRMYSCPWCLRHFTRKENLKLHVRYIHGPLESLTCKLCGNKYKNSNSLRVHSYLYHNAKRDKPNKPLVDGGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00684460; iTF_00684847; iTF_00685082; iTF_00218498; iTF_00230755; iTF_00220133; iTF_00225990; iTF_00218763; iTF_00222187; iTF_00226251; iTF_00228748; iTF_00226670; iTF_00220911; iTF_00220656; iTF_00229424; iTF_00232272; iTF_00214673; iTF_00226929; iTF_00227346; iTF_00229683; iTF_00232053; iTF_00230966; iTF_00233302; iTF_00215095; iTF_00218071; iTF_00221975; iTF_00230103; iTF_00232887; iTF_00221336; iTF_00227608; iTF_00217145; iTF_00221593; iTF_00233561; iTF_00214460; iTF_00215356; iTF_00217820; iTF_00230365; iTF_00232669; iTF_00225310; iTF_00225566; iTF_00217407; iTF_00219871; iTF_00231652; iTF_00215781; iTF_00216042; iTF_00231390; iTF_00223952; iTF_00223268; iTF_00224626; iTF_00224212; iTF_00224895; iTF_00228314; iTF_00228043; iTF_00222844; iTF_00222599; iTF_00219454; iTF_00219186; iTF_01065890; iTF_01067683; iTF_01070435; iTF_01067014; iTF_01069995; iTF_01070699; iTF_01065644; iTF_01069741; iTF_01069294; iTF_01068368; iTF_01068625; iTF_01069047; iTF_01067258; iTF_01066332; iTF_01067934; iTF_01066591; iTF_00141284; iTF_00141895; iTF_00142733; iTF_00141487; iTF_00140660; iTF_00140923; iTF_00142527; iTF_01417777; iTF_01418039; iTF_00983292; iTF_00983037; iTF_01419953; iTF_01420998; iTF_01418664; iTF_01419708; iTF_01418464; iTF_00761045; iTF_00118082; iTF_00761267; iTF_00361252; iTF_00360975; iTF_00360563; iTF_00360285; iTF_01424693; iTF_01424449; iTF_00982360; iTF_00982614; iTF_01420344; iTF_01419065; iTF_01419311; iTF_00676350; iTF_00676097; iTF_00874110; iTF_00873865; iTF_01539680; iTF_01539948;
90% Identity
iTF_00684460; iTF_00684847; iTF_00685082;
80% Identity
iTF_00684460;