Basic Information

Insect: Tetragonula clypearis
Gene Symbol: Hr39
Assembly: GCA_010645135.1
Location: WIUT01015662.1:343-4416[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.3 2.1e+04 -4.7 7.4 111 162 28 84 20 106 0.48

2 4 0.76 1.2e+04 -3.9 4.9 97 163 335 399 283 434 0.51

3 4 2 3.2e+04 -11.6 16.8 74 160 423 524 370 542 0.51

4 4 2.2e-76 3.4e-72 244.9 0.2 1 408 607 985 607 985 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.3	2.1e+04	-4.7	7.4	111	162	28	84	20	106	0.48
2	4	0.76	1.2e+04	-3.9	4.9	97	163	335	399	283	434	0.51
3	4	2	3.2e+04	-11.6	16.8	74	160	423	524	370	542	0.51
4	4	2.2e-76	3.4e-72	244.9	0.2	1	408	607	985	607	985	0.79

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGTCCAGGCCCTGGGCCTGGTGGTCCTGGCTGGTGGCCAGCCTCGCAATCCTGGAAGACAAATTCTTGCACCGccgcctcctcctcgtccACTAGTAGTTCGACCATTCCAGACAGCTCCGCCTCCGTCTCTGCTTCCTGCACCACCACTACCTCCTCCCTGGCGACCACCACGTCAGCCACTTCCTCGACCAGCTGCTGTTCCTCCACACCGTCTGGAACGATCACTGCTGCCCGCTCTTCCGAAACAGGAAAGAATGTCTCTGTCACGACGATTAACGTACCCCCTAATCAGGATATGCACGATGGCAAAGGTATATGCAAGTATCTTACCGGACAAAACGGCGTGACAGTATCCGTGGTGTCAAGCTGTGGATCCGTACTAGGGTGTGGAAACGCGAATGTCGCGTCAACCACGGGAATTGGCCCGAATACTGGCTCCGGCGGCAGCACCAGTACGCAAAGTATTGGAATCGGAGTCAACGTCCTCAGCCAGAATACGGCCGATGACGACGCGGAGGACAGCGACGTCGAGATAAGCAAAATCGACTTTCGAGGGGTGAATTTACgtacgaagaaaaaacgagatgTATTATCGGGTAGCCAGAGCGGAGAGAAAATCGGTGACGGAGAGGTCGAAGATGGGAACGGCTGTTACGATGGGAACGACGCGTCTCAACAACAACCCGAGAGGCCCATGTCGTGGGAAGGGGAACTTTCCGACCAAGAAATGTCTTCCAATACAATCACAAATCAAGATACTCACGAGGATACGTCAATGGAGGGCGTTCAAGTGTGTGGCCCGAGTCCGGGGCCAATGGAGCAAAAATTTCCGATAAAACCAGAACCAGACTTTCAGTCCAATCCAAGATTCACGTTTGGTTCTTTTCACGAGACAGGATTACCTCTGGTTCACGGCCAACAAATACAGCAGCAACGCAACATCGAGAATCTTGAACAAACACAGCAAAACGATTTGCCTCTTCTCGTAGGAAAGTTACTCGGTGGTTATAATAGTTCAACTCCAAATCACAGTCCGGTGTTGAATCCTAGACACCATTTAACAAAGCATAGCCATACAAGATCGCAGGTGCCGTCACCGGACTCGGCGATTCATTCCGCATACAGCGTATTCAGTTCTCCAACGCAAAGTCCTCACGCAGCTCGGCATTCCGCTCTAGGCACGGGAAGTCCAGTCCCGTCTTCGTCGCTGTCCTTGTCGCGACAcagttttaataattcgacCTCTTCGTTGTCGCTCTCCTTGTCACATTCGCTCTCGAGAAACAATTCGGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCACTCGCCCGTTCAACAACCGAGACATCCACAACACCACCAGCATCAAGTTGCTCAAGGAAGTCCACTCCATCTACCAGCAACCGCCTCTCCCGTCATTCCTCATCACTATTCCTCCTCTGCACCGGGCTCGGAGCTATCTCCAGAAGGACACACTGCTACAGACGATCAGGAAGACTGCAGAATACCTTCAGCACCGTCTGGAATATCCACGAGACAGCAATTGATCAACAGCCCGTGCCCAATTTGTGGGGACAAAATCAGCGGTTTTCATTACGGGATATTCTCGTGCGAGTCGTGCAAGGGATTTTTTAAACGCACCGTCCAGAATCGGAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTCGCTACCAGGAAAAAATGCCCCGCCTGTAGATTTGACAAGTGCCTCAATATGGGTATGAAGCTTGAGGCGATTAGAGAGGATCGCACCAGGGGTGGTAGAAGTACGTACCAATGTACGTATACTCTTCCAGCAAGTCTTGTCGGTAGTCCCGCGAGTAACATCGCCAACGATAAATTAACTACTGGAGGAAATTGTAGCCCAGCTCCAGCTGGTAACGAACATCACTATCCGGCAAGACACCACTCGAATCACTCGCATAAAATACAAGTGGTACCCCAACTTCTACAGGATATCATGGATGTAGAACATCTATGGCATTACAATGACAATGATCGCATGACTGGCATTCAAAATGCAGGGATGAATCCGACTAGAAATAACGATACAATCCCGTTATTGGGTGTCAGAAGCAGCGGAGGATCTGGAATAGAGAATGACACAGATTCGAGTGTTGAGTGTTCCTCTAATGGAACCACAGGAAATGGCAATCCCAGTAACAGAACAGACGACAGATCATGCTCTAGTGTTTCAAATGTTGGTAACGAACAATGTGCTGCATCCATTAGTAGCAGTTCTCAAATTAACAATACCAATGGCAATCCAACTCAACATCCTGATTTCTTGTCAAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAAAGTTTACCATTGTTTAAGAACATTTCGATCGATGATCAAATctgtttgttaattaattcctGGTGCGAGCTACTGCTCTTCTCATGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACACTGGAACAGGCTAGGCAGCTTGGTTTGGCGACCTGCATTGAGAGGATGCTTGCATTCACTAACAATTTGAGAAGGCTCCGAGTAGATCAATACGAATATGTAGCAATGAAGGTAATAGTACTGTTAACCTCTGATACAAGTGAACTAAAAGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAGGCTTTACAAGCGCTACAGCAATACACTATAGCAAGGTATCCAGAAATGCCTGCCAAGTTTGGTGAATTATTATTGAGAATTCCAGATTTACAAAGAACATGCCAGGCAGGAAAGGAATTGTTAAGTGCGAAACGTGCCGAAGGAGAAGGCAGCTCATTTAATTTGTTGATGGAATTGTTGAGAGGAgatcattga
Protein Sequence: MSEQNGPSEGPGPGPGPGGPGWWPASQSWKTNSCTAASSSSTSSSTIPDSSASVSASCTTTTSSLATTTSATSSTSCCSSTPSGTITAARSSETGKNVSVTTINVPPNQDMHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNANVASTTGIGPNTGSGGSTSTQSIGIGVNVLSQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDVLSGSQSGEKIGDGEVEDGNGCYDGNDASQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGPSPGPMEQKFPIKPEPDFQSNPRFTFGSFHETGLPLVHGQQIQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGTGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASPVIPHHYSSSAPGSELSPEGHTATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASNIANDKLTTGGNCSPAPAGNEHHYPARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMTGIQNAGMNPTRNNDTIPLLGVRSSGGSGIENDTDSSVECSSNGTTGNGNPSNRTDDRSCSSVSNVGNEQCAASISSSSQINNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00733987;
90% Identity: iTF_00982346;
80% Identity: iTF_01419049;